RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RPL37AP8A6NKH3 93 aa6.79□□□□□ -1.32
MTHFD1-210ENST00000555252 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
MTHFD1-210ENST00000555252 LRCOL1A6NCL2 159 aa6.78□□□□□ -1.32
MTHFD1-210ENST00000555252 PSPHP1O15172 72 aa6.78□□□□□ -1.32
MTHFD1-210ENST00000555252 UBE2BP63146 152 aa6.78□□□□□ -1.32
MTHFD1-210ENST00000555252 DNAH3Q8TD57 4116 aa6.77□□□□□ -1.32
MTHFD1-210ENST00000555252 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
MTHFD1-210ENST00000555252 CASC10Q5T4H9 136 aa6.77□□□□□ -1.33
MTHFD1-210ENST00000555252 NOTCH1P46531 2555 aa6.77□□□□□ -1.33
MTHFD1-210ENST00000555252 UBE2AP49459 152 aa6.77□□□□□ -1.33
MTHFD1-210ENST00000555252 REG3GQ6UW15 175 aa6.77□□□□□ -1.33
MTHFD1-210ENST00000555252 IGFL1Q6UW32 110 aa6.76□□□□□ -1.33
MTHFD1-210ENST00000555252 MGAM2Q2M2H8 2515 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 NBEAL1Q6ZS30 2694 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 PRB2P02812 416 aaPredicted RBP6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 Q5VV11 94 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 CMYA5Q8N3K9 4069 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 FAM168BA1KXE4 195 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 A8MUN3 132 aa6.75□□□□□ -1.33
MTHFD1-210ENST00000555252 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
MTHFD1-210ENST00000555252 H0Y9P7 68 aa6.73□□□□□ -1.33
MTHFD1-210ENST00000555252 CD164Q04900 197 aa6.73□□□□□ -1.33
MTHFD1-210ENST00000555252 WFDC13Q8IUB5 93 aa6.73□□□□□ -1.33
MTHFD1-210ENST00000555252 Q8N9P0 234 aaPredicted RBP6.73□□□□□ -1.33
MTHFD1-210ENST00000555252 CNBPP62633 177 aaKnown RBP6.72□□□□□ -1.33
MTHFD1-210ENST00000555252 PRR4Q16378 134 aa6.72□□□□□ -1.33
MTHFD1-210ENST00000555252 C14orf177Q52M58 125 aa6.71□□□□□ -1.34
MTHFD1-210ENST00000555252 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
MTHFD1-210ENST00000555252 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
MTHFD1-210ENST00000555252 A0A087WSZ3 146 aa6.7□□□□□ -1.34
MTHFD1-210ENST00000555252 C16orf90A8MZG2 172 aa6.7□□□□□ -1.34
MTHFD1-210ENST00000555252 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
MTHFD1-210ENST00000555252 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
MTHFD1-210ENST00000555252 A8MWP4 228 aa6.7□□□□□ -1.34
MTHFD1-210ENST00000555252 Q75L30 129 aa6.7□□□□□ -1.34
MTHFD1-210ENST00000555252 UBE2DNLQ8IWF7 75 aa6.69□□□□□ -1.34
MTHFD1-210ENST00000555252 SPRR1BP22528 89 aa6.69□□□□□ -1.34
MTHFD1-210ENST00000555252 CHKB-CPT1BH3BT56 60 aa6.67□□□□□ -1.34
MTHFD1-210ENST00000555252 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
MTHFD1-210ENST00000555252 APLNQ9ULZ1 77 aa6.67□□□□□ -1.34
MTHFD1-210ENST00000555252 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
MTHFD1-210ENST00000555252 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
MTHFD1-210ENST00000555252 A0A096LNI7 61 aa6.66□□□□□ -1.34
MTHFD1-210ENST00000555252 H0Y9J4 135 aa6.66□□□□□ -1.34
MTHFD1-210ENST00000555252 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
MTHFD1-210ENST00000555252 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
MTHFD1-210ENST00000555252 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
MTHFD1-210ENST00000555252 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
MTHFD1-210ENST00000555252 NDUFS5O43920 106 aa6.65□□□□□ -1.35
MTHFD1-210ENST00000555252 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
MTHFD1-210ENST00000555252 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
MTHFD1-210ENST00000555252 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
MTHFD1-210ENST00000555252 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
MTHFD1-210ENST00000555252 RPL37AP61513 92 aaKnown RBP6.63□□□□□ -1.35
MTHFD1-210ENST00000555252 COA5Q86WW8 74 aa6.63□□□□□ -1.35
MTHFD1-210ENST00000555252 HUWE1Q7Z6Z7 4374 aaKnown RBP6.63□□□□□ -1.35
MTHFD1-210ENST00000555252 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
MTHFD1-210ENST00000555252 A0A0G2JQZ4 141 aa6.61□□□□□ -1.35
MTHFD1-210ENST00000555252 MMP24-AS1A0A0U1RRL7 71 aa6.61□□□□□ -1.35
MTHFD1-210ENST00000555252 PRLHP81277 87 aa6.61□□□□□ -1.35
MTHFD1-210ENST00000555252 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
MTHFD1-210ENST00000555252 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
MTHFD1-210ENST00000555252 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
MTHFD1-210ENST00000555252 MOBPQ13875 183 aa6.59□□□□□ -1.35
MTHFD1-210ENST00000555252 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
MTHFD1-210ENST00000555252 A6NED7 52 aa6.59□□□□□ -1.35
MTHFD1-210ENST00000555252 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
MTHFD1-210ENST00000555252 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
MTHFD1-210ENST00000555252 LCA10Q71F78 164 aa6.58□□□□□ -1.36
MTHFD1-210ENST00000555252 MEGF8Q7Z7M0 2845 aa6.58□□□□□ -1.36
MTHFD1-210ENST00000555252 A6NN06 94 aa6.57□□□□□ -1.36
MTHFD1-210ENST00000555252 A8MU10 97 aa6.57□□□□□ -1.36
MTHFD1-210ENST00000555252 Q6ZR54 194 aa6.57□□□□□ -1.36
MTHFD1-210ENST00000555252 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
MTHFD1-210ENST00000555252 SPTSSBQ8NFR3 76 aa6.54□□□□□ -1.36
MTHFD1-210ENST00000555252 CHTF8P0CG12 524 aa6.54□□□□□ -1.36
MTHFD1-210ENST00000555252 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-210ENST00000555252 COL7A1Q02388 2944 aa6.52□□□□□ -1.36
MTHFD1-210ENST00000555252 RBM12B-AS1Q9P1G2 102 aa6.52□□□□□ -1.37
MTHFD1-210ENST00000555252 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
MTHFD1-210ENST00000555252 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
MTHFD1-210ENST00000555252 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
MTHFD1-210ENST00000555252 STAB2Q8WWQ8 2551 aa6.5□□□□□ -1.37
MTHFD1-210ENST00000555252 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
MTHFD1-210ENST00000555252 Q96NJ1 140 aa6.49□□□□□ -1.37
MTHFD1-210ENST00000555252 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
MTHFD1-210ENST00000555252 PCOTHQ58A44 107 aa6.48□□□□□ -1.37
MTHFD1-210ENST00000555252 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
MTHFD1-210ENST00000555252 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
MTHFD1-210ENST00000555252 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
MTHFD1-210ENST00000555252 A0A1B0GVX0 72 aa6.46□□□□□ -1.37
MTHFD1-210ENST00000555252 SPAG11AQ6PDA7 123 aa6.46□□□□□ -1.37
MTHFD1-210ENST00000555252 HRES1P13985 223 aa6.46□□□□□ -1.38
MTHFD1-210ENST00000555252 A0A087WTM6 91 aa6.45□□□□□ -1.38
MTHFD1-210ENST00000555252 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
MTHFD1-210ENST00000555252 PANO1I0J062 215 aa6.45□□□□□ -1.38
MTHFD1-210ENST00000555252 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
MTHFD1-210ENST00000555252 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
MTHFD1-210ENST00000555252 DNAH10Q8IVF4 4471 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms