RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SMCR5Q8TEV8 140 aa3.8□□□□□ -1.8
PRKDC-211ENST00000546304 Q9BRP9 147 aa3.8□□□□□ -1.8
PRKDC-211ENST00000546304 NHP2Q9NX24 153 aaKnown RBP3.8□□□□□ -1.8
PRKDC-211ENST00000546304 TRBV7-6A0A0J9YX20 115 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 A0A1B0GWB2 263 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 H7C2G1 150 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 M0R143 59 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 COX7BP24311 80 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 Q1RN00 199 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 Q75L30 129 aa3.79□□□□□ -1.8
PRKDC-211ENST00000546304 ZNF706Q9Y5V0 76 aaPredicted RBP3.79□□□□□ -1.8
PRKDC-211ENST00000546304 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
PRKDC-211ENST00000546304 OXTP01178 125 aa3.78□□□□□ -1.8
PRKDC-211ENST00000546304 BVES-AS1Q5T3Y7 98 aa3.78□□□□□ -1.8
PRKDC-211ENST00000546304 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
PRKDC-211ENST00000546304 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
PRKDC-211ENST00000546304 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
PRKDC-211ENST00000546304 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
PRKDC-211ENST00000546304 MT3P25713 68 aa3.77□□□□□ -1.81
PRKDC-211ENST00000546304 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-211ENST00000546304 LINC01600Q96MT4 127 aa3.77□□□□□ -1.81
PRKDC-211ENST00000546304 SPRR4Q96PI1 79 aa3.77□□□□□ -1.81
PRKDC-211ENST00000546304 TSPAN13O95857 204 aa3.76□□□□□ -1.81
PRKDC-211ENST00000546304 FAM229BQ4G0N7 80 aa3.76□□□□□ -1.81
PRKDC-211ENST00000546304 V9GYY9 64 aa3.76□□□□□ -1.81
PRKDC-211ENST00000546304 A0A087X002 238 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 SLC25A20O43772 301 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 CRYGAP11844 174 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 LINC00483Q53H64 154 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
PRKDC-211ENST00000546304 BATFQ16520 125 aa3.74□□□□□ -1.81
PRKDC-211ENST00000546304 LINC00575Q6W349 94 aa3.74□□□□□ -1.81
PRKDC-211ENST00000546304 IGLV5-48A0A075B6I7 105 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 hADV29S1A0JD25 119 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 H0YGX0 51 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 PSMB2P49721 201 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
PRKDC-211ENST00000546304 KRTAP13-2Q52LG2 175 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 Q6ZQY7 126 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 FAM218AQ96MZ4 157 aa3.73□□□□□ -1.81
PRKDC-211ENST00000546304 COX6CP09669 75 aa3.72□□□□□ -1.81
PRKDC-211ENST00000546304 SPRR1BP22528 89 aa3.72□□□□□ -1.81
PRKDC-211ENST00000546304 KRTAP10-8P60410 259 aa3.72□□□□□ -1.81
PRKDC-211ENST00000546304 C3orf22Q8N5N4 141 aa3.72□□□□□ -1.81
PRKDC-211ENST00000546304 IGLV9-49A0A0B4J1Y8 123 aa3.71□□□□□ -1.82
PRKDC-211ENST00000546304 TEX49A0A1B0GTD5 131 aa3.71□□□□□ -1.82
PRKDC-211ENST00000546304 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-211ENST00000546304 MOBPQ13875 183 aa3.71□□□□□ -1.82
PRKDC-211ENST00000546304 C9orf153Q5TBE3 101 aa3.71□□□□□ -1.82
PRKDC-211ENST00000546304 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-211ENST00000546304 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
PRKDC-211ENST00000546304 CLEC2BQ92478 149 aa3.71□□□□□ -1.82
PRKDC-211ENST00000546304 A0A1B0GX51 115 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 SNCGO76070 127 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 DNAL4O96015 105 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 Q6ZVQ6 151 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 Q8NBF4 154 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 DEFB105AQ8NG35 78 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 NAA38Q9BRA0 125 aaKnown RBP3.7□□□□□ -1.82
PRKDC-211ENST00000546304 SNHG12Q9BXW3 62 aa3.7□□□□□ -1.82
PRKDC-211ENST00000546304 LST1O00453 97 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 Q8N377 158 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 LAMTOR3Q9UHA4 124 aa3.69□□□□□ -1.82
PRKDC-211ENST00000546304 F8WEM9 126 aa3.68□□□□□ -1.82
PRKDC-211ENST00000546304 H3BUT2 72 aa3.68□□□□□ -1.82
PRKDC-211ENST00000546304 TRACP01848 142 aa3.68□□□□□ -1.82
PRKDC-211ENST00000546304 OCIAD2Q56VL3 154 aa3.68□□□□□ -1.82
PRKDC-211ENST00000546304 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
PRKDC-211ENST00000546304 TAX1BP3O14907 124 aa3.67□□□□□ -1.82
PRKDC-211ENST00000546304 COL5A1-AS1Q5SY13 56 aa3.67□□□□□ -1.82
PRKDC-211ENST00000546304 ORMDL1Q9P0S3 153 aa3.67□□□□□ -1.82
PRKDC-211ENST00000546304 LRP2P98164 4655 aa3.67□□□□□ -1.82
PRKDC-211ENST00000546304 TCL1BO95988 128 aa3.66□□□□□ -1.82
PRKDC-211ENST00000546304 ATXN8Q156A1 80 aa3.66□□□□□ -1.82
PRKDC-211ENST00000546304 UBR4Q5T4S7 5183 aa3.65□□□□□ -1.82
PRKDC-211ENST00000546304 A0A1W2PPM0 123 aa3.65□□□□□ -1.83
PRKDC-211ENST00000546304 FABP2P12104 132 aa3.65□□□□□ -1.83
PRKDC-211ENST00000546304 SPAG11AQ6PDA7 123 aa3.65□□□□□ -1.83
PRKDC-211ENST00000546304 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
PRKDC-211ENST00000546304 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
PRKDC-211ENST00000546304 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
PRKDC-211ENST00000546304 H3BQ85 93 aa3.64□□□□□ -1.83
PRKDC-211ENST00000546304 NDUFV3P56181 108 aaKnown RBP3.64□□□□□ -1.83
PRKDC-211ENST00000546304 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
PRKDC-211ENST00000546304 SPINK1P00995 79 aa3.63□□□□□ -1.83
PRKDC-211ENST00000546304 RPS29P62273 56 aaKnown RBP3.63□□□□□ -1.83
PRKDC-211ENST00000546304 Q6JHZ5 121 aa3.63□□□□□ -1.83
PRKDC-211ENST00000546304 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
PRKDC-211ENST00000546304 IGFL1Q6UW32 110 aa3.63□□□□□ -1.83
PRKDC-211ENST00000546304 LPAP08519 4548 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 A0A0G2JQZ4 141 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 A0A1B0GV72 72 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 C9JAW5 83 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms