RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MOBPQ13875 183 aa10.43□□□□□ -0.74
VARS2-212ENST00000542001 VPS13CQ709C8 3753 aa10.42□□□□□ -0.74
VARS2-212ENST00000542001 ATP5EP56381 51 aaPredicted RBP10.42□□□□□ -0.74
VARS2-212ENST00000542001 F8WDY8 70 aa10.42□□□□□ -0.74
VARS2-212ENST00000542001 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
VARS2-212ENST00000542001 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
VARS2-212ENST00000542001 A0A1W2PNM2 257 aa10.4□□□□□ -0.75
VARS2-212ENST00000542001 PMAIP1Q13794 54 aa10.39□□□□□ -0.75
VARS2-212ENST00000542001 NBDYA0A0U1RRE5 68 aa10.39□□□□□ -0.75
VARS2-212ENST00000542001 LINC01600Q96MT4 127 aa10.39□□□□□ -0.75
VARS2-212ENST00000542001 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
VARS2-212ENST00000542001 C1orf134Q5TEV5 83 aa10.36□□□□□ -0.75
VARS2-212ENST00000542001 H7BZZ5 65 aa10.36□□□□□ -0.75
VARS2-212ENST00000542001 A6NED7 52 aa10.35□□□□□ -0.75
VARS2-212ENST00000542001 SEC61GP60059 68 aa10.35□□□□□ -0.75
VARS2-212ENST00000542001 C1orf64Q8NEQ6 169 aa10.34□□□□□ -0.75
VARS2-212ENST00000542001 ZNF706Q9Y5V0 76 aaPredicted RBP10.33□□□□□ -0.76
VARS2-212ENST00000542001 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
VARS2-212ENST00000542001 OXTP01178 125 aa10.3□□□□□ -0.76
VARS2-212ENST00000542001 PRR15LQ9BU68 103 aa10.3□□□□□ -0.76
VARS2-212ENST00000542001 RTL8CO15255 209 aa10.29□□□□□ -0.76
VARS2-212ENST00000542001 hDV103S1A0JD37 113 aa10.27□□□□□ -0.77
VARS2-212ENST00000542001 KRTAP1-5Q9BYS1 174 aa10.24□□□□□ -0.77
VARS2-212ENST00000542001 Q5XG85 94 aa10.23□□□□□ -0.77
VARS2-212ENST00000542001 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
VARS2-212ENST00000542001 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
VARS2-212ENST00000542001 BCE1O60756 84 aa10.22□□□□□ -0.77
VARS2-212ENST00000542001 SPINK1P00995 79 aa10.22□□□□□ -0.77
VARS2-212ENST00000542001 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.78
VARS2-212ENST00000542001 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.78
VARS2-212ENST00000542001 C9orf163Q8N9P6 203 aa10.21□□□□□ -0.78
VARS2-212ENST00000542001 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
VARS2-212ENST00000542001 IGKV2D-30A0A075B6S6 120 aa10.18□□□□□ -0.78
VARS2-212ENST00000542001 IGKV2-30P06310 120 aa10.18□□□□□ -0.78
VARS2-212ENST00000542001 APLNQ9ULZ1 77 aa10.18□□□□□ -0.78
VARS2-212ENST00000542001 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
VARS2-212ENST00000542001 A8MUN3 132 aa10.16□□□□□ -0.78
VARS2-212ENST00000542001 WIPF1O43516 503 aa10.16□□□□□ -0.78
VARS2-212ENST00000542001 TRAV22A0A0B4J277 110 aa10.15□□□□□ -0.78
VARS2-212ENST00000542001 DSCR10P59022 87 aa10.15□□□□□ -0.79
VARS2-212ENST00000542001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
VARS2-212ENST00000542001 A0A087WTM6 91 aa10.13□□□□□ -0.79
VARS2-212ENST00000542001 TRRAPQ9Y4A5 3859 aa10.13□□□□□ -0.79
VARS2-212ENST00000542001 A8MWP4 228 aa10.13□□□□□ -0.79
VARS2-212ENST00000542001 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
VARS2-212ENST00000542001 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
VARS2-212ENST00000542001 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
VARS2-212ENST00000542001 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
VARS2-212ENST00000542001 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
VARS2-212ENST00000542001 TGP01266 2768 aa10.09□□□□□ -0.79
VARS2-212ENST00000542001 A0A1B0GW54 56 aa10.09□□□□□ -0.79
VARS2-212ENST00000542001 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
VARS2-212ENST00000542001 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
VARS2-212ENST00000542001 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
VARS2-212ENST00000542001 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
VARS2-212ENST00000542001 PANO1I0J062 215 aa10.02□□□□□ -0.8
VARS2-212ENST00000542001 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
VARS2-212ENST00000542001 ZNF861PO60384 105 aa10.02□□□□□ -0.81
VARS2-212ENST00000542001 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
VARS2-212ENST00000542001 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
VARS2-212ENST00000542001 SPRR1AP35321 89 aa10□□□□□ -0.81
VARS2-212ENST00000542001 TNP2Q05952 138 aa10□□□□□ -0.81
VARS2-212ENST00000542001 SPRR4Q96PI1 79 aa10□□□□□ -0.81
VARS2-212ENST00000542001 MRPL34Q9BQ48 92 aaKnown RBP9.97□□□□□ -0.81
VARS2-212ENST00000542001 LINC00313P59037 77 aa9.96□□□□□ -0.82
VARS2-212ENST00000542001 COA5Q86WW8 74 aa9.96□□□□□ -0.82
VARS2-212ENST00000542001 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
VARS2-212ENST00000542001 TP53AIP1Q9HCN2 124 aa9.95□□□□□ -0.82
VARS2-212ENST00000542001 KRTAP11-1Q8IUC1 163 aa9.94□□□□□ -0.82
VARS2-212ENST00000542001 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
VARS2-212ENST00000542001 ZNF469Q96JG9 3925 aaPredicted RBP9.94□□□□□ -0.82
VARS2-212ENST00000542001 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
VARS2-212ENST00000542001 TYMSOSQ8TAI1 123 aa9.93□□□□□ -0.82
VARS2-212ENST00000542001 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
VARS2-212ENST00000542001 KRTAP4-16G5E9R7 235 aaPredicted RBP9.9□□□□□ -0.83
VARS2-212ENST00000542001 Q96NJ1 140 aa9.89□□□□□ -0.83
VARS2-212ENST00000542001 IGLV7-43P04211 117 aa9.89□□□□□ -0.83
VARS2-212ENST00000542001 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
VARS2-212ENST00000542001 C7orf65Q6ZTY9 151 aa9.88□□□□□ -0.83
VARS2-212ENST00000542001 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
VARS2-212ENST00000542001 WWC2-AS2Q96NR7 200 aa9.86□□□□□ -0.83
VARS2-212ENST00000542001 FLG2Q5D862 2391 aaPredicted RBP9.85□□□□□ -0.83
VARS2-212ENST00000542001 H3BPC8 53 aa9.84□□□□□ -0.83
VARS2-212ENST00000542001 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
VARS2-212ENST00000542001 ACYP2P14621 99 aa9.81□□□□□ -0.84
VARS2-212ENST00000542001 A0A1B0GU69 56 aa9.81□□□□□ -0.84
VARS2-212ENST00000542001 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
VARS2-212ENST00000542001 LINC00472Q9H8W2 130 aa9.78□□□□□ -0.84
VARS2-212ENST00000542001 LOC101927531A0A1B0GV80 90 aa9.76□□□□□ -0.85
VARS2-212ENST00000542001 CD164Q04900 197 aa9.75□□□□□ -0.85
VARS2-212ENST00000542001 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
VARS2-212ENST00000542001 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
VARS2-212ENST00000542001 Q8N9P0 234 aaPredicted RBP9.73□□□□□ -0.85
VARS2-212ENST00000542001 Q8N1X5 172 aa9.72□□□□□ -0.85
VARS2-212ENST00000542001 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
VARS2-212ENST00000542001 A0A087X002 238 aa9.69□□□□□ -0.86
VARS2-212ENST00000542001 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
VARS2-212ENST00000542001 Q1T7F1 81 aa9.69□□□□□ -0.86
VARS2-212ENST00000542001 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
VARS2-212ENST00000542001 KTN1-AS1Q86SY8 53 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms