RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 LINC00575Q6W349 94 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 LEAP2Q969E1 77 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 CADP27708 2225 aa2.68□□□□□ -1.98
ITGB1-219ENST00000534049 ABCA1O95477 2261 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 RTTNQ86VV8 2226 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 H0Y9P7 68 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 GIG44P09565 113 aaPredicted RBP2.67□□□□□ -1.98
ITGB1-219ENST00000534049 CCL18P55774 89 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 C10orf55Q5SWW7 151 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 ZFAND2AQ8N6M9 145 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 FAM104AQ969W3 186 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 CR1P17927 2039 aa2.67□□□□□ -1.98
ITGB1-219ENST00000534049 TET2Q6N021 2002 aaPredicted RBP2.66□□□□□ -1.98
ITGB1-219ENST00000534049 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 IGLV4-60A0A075B6I1 120 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 A0A087WSZ3 146 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV7-81A0A0B4J1V7 117 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 B4DSR2 109 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 IGHV1-2P23083 117 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 LINC00158P58513 81 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 KLK9Q2XQG4 91 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 COA5Q86WW8 74 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 Q8NAQ8 132 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 TENM1Q9UKZ4 2725 aa2.66□□□□□ -1.98
ITGB1-219ENST00000534049 IGLV11-55A0A075B6I3 123 aa2.65□□□□□ -1.99
ITGB1-219ENST00000534049 TRGV4A0A0C4DH28 118 aa2.65□□□□□ -1.99
ITGB1-219ENST00000534049 A0A1W2PNM2 257 aa2.65□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV3-23P01764 117 aa2.65□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV1-8P0DP01 117 aa2.65□□□□□ -1.99
ITGB1-219ENST00000534049 COX17Q14061 63 aa2.65□□□□□ -1.99
ITGB1-219ENST00000534049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.65□□□□□ -1.991e-6■■□□□ 14.5
ITGB1-219ENST00000534049 FREM1Q5H8C1 2179 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV3-66A0A0C4DH42 116 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 K7ERS5 55 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 TFF1P04155 84 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 REG3AQ06141 175 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 NPBQ8NG41 125 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 CHCHD7Q9BUK0 85 aa2.64□□□□□ -1.99
ITGB1-219ENST00000534049 DNAH3Q8TD57 4116 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV3-74A0A0B4J1X5 117 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV3-64DA0A0J9YX35 117 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 IGLV1-47P01700 117 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV3-11P01762 117 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 PRB2P02812 416 aaPredicted RBP2.63□□□□□ -1.99
ITGB1-219ENST00000534049 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
ITGB1-219ENST00000534049 Q8NDZ9 215 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 LINC01006Q8NI28 216 aa2.63□□□□□ -1.99
ITGB1-219ENST00000534049 ARFGEF3Q5TH69 2177 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 ALPK2Q86TB3 2170 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 CLPSL1A2RUU4 121 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 UQCR11O14957 56 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 SPINK7P58062 85 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 CAMK2N2Q96S95 79 aa2.62□□□□□ -1.99
ITGB1-219ENST00000534049 MALRD1Q5VYJ5 2156 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 IGLV10-54A0A075B6I4 117 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 IGHV1-46P01743 117 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 COX7A1P24310 79 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 COX6A2Q02221 97 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 C1orf137Q5JT78 98 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 PRR9Q5T870 116 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 Q6ZQY7 126 aa2.61□□□□□ -1.99
ITGB1-219ENST00000534049 KMT2CQ8NEZ4 4911 aaKnown RBP2.61□□□□□ -1.99
ITGB1-219ENST00000534049 DEFB131BA0A096LNP1 70 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 M0R2N4 97 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 CHTF8P0CG12 524 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 PRR4Q16378 134 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 DMAC1Q96GE9 116 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 SPRR4Q96PI1 79 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 DPM3Q9P2X0 92 aa2.6□□□□□ -1.99
ITGB1-219ENST00000534049 DSCAML1Q8TD84 2053 aa2.59□□□□□ -1.99
ITGB1-219ENST00000534049 PKD1L1Q8TDX9 2849 aa2.59□□□□□ -1.99
ITGB1-219ENST00000534049 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
ITGB1-219ENST00000534049 Q8IZM0 81 aa2.59□□□□□ -1.99
ITGB1-219ENST00000534049 VWFP04275 2813 aa2.59□□□□□ -2
ITGB1-219ENST00000534049 RYR3Q15413 4870 aa2.58□□□□□ -2
ITGB1-219ENST00000534049 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
ITGB1-219ENST00000534049 LYNX1G3V0Z9 82 aa2.58□□□□□ -2
ITGB1-219ENST00000534049 LYNX1P0DP58 116 aa2.58□□□□□ -2
ITGB1-219ENST00000534049 ST20-AS1Q8NBB2 130 aa2.58□□□□□ -2
ITGB1-219ENST00000534049 KAAG1Q9UBP8 84 aa2.58□□□□□ -2
ITGB1-219ENST00000534049 NOTCH1P46531 2555 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 IGLV5-48A0A075B6I7 105 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 IGKV2D-24A0A075B6R9 120 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 IGLV6-57P01721 117 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 CASC10Q5T4H9 136 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 Q8N9L7 120 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 DNAH9Q9NYC9 4486 aa2.57□□□□□ -2
ITGB1-219ENST00000534049 IGLV1-50A0A075B6I6 118 aa2.56□□□□□ -2
ITGB1-219ENST00000534049 APELAP0DMC3 54 aa2.56□□□□□ -2
ITGB1-219ENST00000534049 LINC00483Q53H64 154 aa2.56□□□□□ -2
ITGB1-219ENST00000534049 MINOS1Q5TGZ0 78 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms