RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 YPEL4Q96NS1 127 aa3.32□□□□□ -1.88
SOX6-216ENST00000533658 ETDCA0A1B0GVM5 59 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 MP68P56378 58 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 COX17Q14061 63 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 IFI27L1Q96BM0 104 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 NDUFA12Q9UI09 145 aa3.31□□□□□ -1.88
SOX6-216ENST00000533658 LINC01549A6NIU2 74 aa3.3□□□□□ -1.88
SOX6-216ENST00000533658 JOSD1Q15040 202 aaPredicted RBP3.3□□□□□ -1.88
SOX6-216ENST00000533658 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
SOX6-216ENST00000533658 Q9BRP9 147 aa3.3□□□□□ -1.88
SOX6-216ENST00000533658 KCNQ1DNQ9H478 68 aa3.3□□□□□ -1.88
SOX6-216ENST00000533658 SPRR1AP35321 89 aa3.29□□□□□ -1.88
SOX6-216ENST00000533658 DSCR10P59022 87 aa3.29□□□□□ -1.88
SOX6-216ENST00000533658 HRCT1Q6UXD1 115 aa3.29□□□□□ -1.88
SOX6-216ENST00000533658 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
SOX6-216ENST00000533658 TRAV12-1A0A0B4J245 112 aa3.28□□□□□ -1.88
SOX6-216ENST00000533658 SCGB1A1P11684 91 aa3.28□□□□□ -1.88
SOX6-216ENST00000533658 FABP4P15090 132 aa3.28□□□□□ -1.88
SOX6-216ENST00000533658 NMUP48645 174 aa3.28□□□□□ -1.88
SOX6-216ENST00000533658 Q1RN00 199 aa3.28□□□□□ -1.88
SOX6-216ENST00000533658 ASB16-AS1Q495Z4 193 aa3.28□□□□□ -1.88
SOX6-216ENST00000533658 ZNF706Q9Y5V0 76 aaPredicted RBP3.28□□□□□ -1.88
SOX6-216ENST00000533658 TRGC2P03986 189 aa3.27□□□□□ -1.89
SOX6-216ENST00000533658 LINC00483Q53H64 154 aa3.27□□□□□ -1.89
SOX6-216ENST00000533658 C9orf153Q5TBE3 101 aa3.27□□□□□ -1.89
SOX6-216ENST00000533658 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
SOX6-216ENST00000533658 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
SOX6-216ENST00000533658 CHCHD1Q96BP2 118 aaKnown RBP3.27□□□□□ -1.89
SOX6-216ENST00000533658 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 MYMXA0A1B0GTQ4 84 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 C9orf92A6NGG3 77 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 J3QQQ9 107 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 LEPROTO15243 131 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 SPINK1P00995 79 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
SOX6-216ENST00000533658 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 S100A7L2Q5SY68 101 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 SFTA2Q6UW10 78 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 Q6ZRX8 168 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 SVBPQ8N300 66 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 TTTY13Q9BZ97 58 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 USH2AO75445 5202 aa3.25□□□□□ -1.89
SOX6-216ENST00000533658 TRAV23DV6A0A075B6W5 121 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 H7C2G1 150 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 LEPROTL1O95214 131 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 IGLV6-57P01721 117 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 LGALS3P17931 250 aaKnown RBP3.24□□□□□ -1.89
SOX6-216ENST00000533658 MT1HP80294 61 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 ANKRD29Q8N6D5 301 aa3.24□□□□□ -1.89
SOX6-216ENST00000533658 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 ZNF73O43830 326 aaPredicted RBP3.23□□□□□ -1.89
SOX6-216ENST00000533658 DPM2O94777 84 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 IGKCP01834 107 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 S100A2P29034 98 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 NDUFA5Q16718 116 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 CEND1Q8N111 149 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 DEFB105AQ8NG35 78 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 MIEN1Q9BRT3 115 aa3.23□□□□□ -1.89
SOX6-216ENST00000533658 LOC107984156A0A0G2JMH3 177 aa3.22□□□□□ -1.89
SOX6-216ENST00000533658 TRBV10-2A0A0K0K1G8 114 aa3.22□□□□□ -1.89
SOX6-216ENST00000533658 SLC25A20O43772 301 aa3.22□□□□□ -1.89
SOX6-216ENST00000533658 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SOX6-216ENST00000533658 SSBP3-AS1Q7Z2R9 100 aa3.22□□□□□ -1.89
SOX6-216ENST00000533658 ARL17AQ8IVW1 177 aa3.22□□□□□ -1.89
SOX6-216ENST00000533658 PLNP26678 52 aa3.21□□□□□ -1.9
SOX6-216ENST00000533658 LINC00308Q8TCZ7 52 aa3.21□□□□□ -1.9
SOX6-216ENST00000533658 COLCA2A8K830 154 aa3.2□□□□□ -1.9
SOX6-216ENST00000533658 LINC00587B1AMM8 73 aa3.2□□□□□ -1.9
SOX6-216ENST00000533658 C8orf17Q9NRJ1 99 aa3.2□□□□□ -1.9
SOX6-216ENST00000533658 HSPB8Q9UJY1 196 aa3.2□□□□□ -1.9
SOX6-216ENST00000533658 NDUFC2O95298 119 aa3.19□□□□□ -1.9
SOX6-216ENST00000533658 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
SOX6-216ENST00000533658 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
SOX6-216ENST00000533658 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
SOX6-216ENST00000533658 ZNF815PA8K554 130 aa3.18□□□□□ -1.9
SOX6-216ENST00000533658 SYS1-DBNDD2H3BUS1 97 aa3.18□□□□□ -1.9
SOX6-216ENST00000533658 S100A1P23297 94 aa3.18□□□□□ -1.9
SOX6-216ENST00000533658 COX7BP24311 80 aa3.18□□□□□ -1.9
SOX6-216ENST00000533658 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
SOX6-216ENST00000533658 ATOH7Q8N100 152 aa3.18□□□□□ -1.9
SOX6-216ENST00000533658 BPY2O14599 106 aa3.17□□□□□ -1.9
SOX6-216ENST00000533658 LINC00313P59037 77 aa3.17□□□□□ -1.9
SOX6-216ENST00000533658 PCP2Q8IVA1 136 aa3.17□□□□□ -1.9
SOX6-216ENST00000533658 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 HIST1H2BKO60814 126 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 HIST1H2BJP06899 126 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 SPRR1BP22528 89 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 HIST1H2BOP23527 126 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 HIST1H2BBP33778 126 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
SOX6-216ENST00000533658 HIST1H2BDP58876 126 aa3.16□□□□□ -1.9
SOX6-216ENST00000533658 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
SOX6-216ENST00000533658 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms