RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
PCDHGB1-201ENST00000523390 CYSTM1Q9H1C7 97 aa8.41□□□□□ -1.06
PCDHGB1-201ENST00000523390 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
PCDHGB1-201ENST00000523390 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
PCDHGB1-201ENST00000523390 SMIM26A0A096LP01 95 aa8.39□□□□□ -1.07
PCDHGB1-201ENST00000523390 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
PCDHGB1-201ENST00000523390 K7EQZ3 153 aa8.38□□□□□ -1.07
PCDHGB1-201ENST00000523390 ZNF861PO60384 105 aa8.38□□□□□ -1.07
PCDHGB1-201ENST00000523390 IGKV2-30P06310 120 aa8.38□□□□□ -1.07
PCDHGB1-201ENST00000523390 TENM4Q6N022 2769 aa8.38□□□□□ -1.07
PCDHGB1-201ENST00000523390 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
PCDHGB1-201ENST00000523390 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
PCDHGB1-201ENST00000523390 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
PCDHGB1-201ENST00000523390 V9GYY9 64 aa8.36□□□□□ -1.07
PCDHGB1-201ENST00000523390 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
PCDHGB1-201ENST00000523390 Q8NDZ9 215 aa8.35□□□□□ -1.07
PCDHGB1-201ENST00000523390 CUBNO60494 3623 aa8.34□□□□□ -1.07
PCDHGB1-201ENST00000523390 TNP2Q05952 138 aa8.34□□□□□ -1.07
PCDHGB1-201ENST00000523390 BSNQ9UPA5 3926 aa8.33□□□□□ -1.08
PCDHGB1-201ENST00000523390 A6NED7 52 aa8.33□□□□□ -1.08
PCDHGB1-201ENST00000523390 SPINK1P00995 79 aa8.33□□□□□ -1.08
PCDHGB1-201ENST00000523390 A0A1W2PNM2 257 aa8.32□□□□□ -1.08
PCDHGB1-201ENST00000523390 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
PCDHGB1-201ENST00000523390 A8MWP4 228 aa8.31□□□□□ -1.08
PCDHGB1-201ENST00000523390 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
PCDHGB1-201ENST00000523390 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
PCDHGB1-201ENST00000523390 MXRA5Q9NR99 2828 aa8.3□□□□□ -1.08
PCDHGB1-201ENST00000523390 TRAV22A0A0B4J277 110 aa8.29□□□□□ -1.08
PCDHGB1-201ENST00000523390 LINC00313P59037 77 aa8.29□□□□□ -1.08
PCDHGB1-201ENST00000523390 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
PCDHGB1-201ENST00000523390 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
PCDHGB1-201ENST00000523390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
PCDHGB1-201ENST00000523390 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
PCDHGB1-201ENST00000523390 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
PCDHGB1-201ENST00000523390 PSPHP1O15172 72 aa8.27□□□□□ -1.09
PCDHGB1-201ENST00000523390 H7BZZ5 65 aa8.25□□□□□ -1.09
PCDHGB1-201ENST00000523390 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
PCDHGB1-201ENST00000523390 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
PCDHGB1-201ENST00000523390 IGLV5-48A0A075B6I7 105 aa8.24□□□□□ -1.09
PCDHGB1-201ENST00000523390 KRTAP26-1Q6PEX3 210 aa8.24□□□□□ -1.09
PCDHGB1-201ENST00000523390 Q96NJ1 140 aa8.23□□□□□ -1.09
PCDHGB1-201ENST00000523390 MRPL34Q9BQ48 92 aaKnown RBP8.22□□□□□ -1.09
PCDHGB1-201ENST00000523390 PRO0628Q9UI54 55 aa8.22□□□□□ -1.09
PCDHGB1-201ENST00000523390 C1orf195Q5TG92 126 aa8.21□□□□□ -1.1
PCDHGB1-201ENST00000523390 LINC00336Q6ZUF6 198 aa8.21□□□□□ -1.1
PCDHGB1-201ENST00000523390 DSCR10P59022 87 aa8.2□□□□□ -1.1
PCDHGB1-201ENST00000523390 C8orf17Q9NRJ1 99 aa8.2□□□□□ -1.1
PCDHGB1-201ENST00000523390 OXTP01178 125 aa8.2□□□□□ -1.1
PCDHGB1-201ENST00000523390 KLKP1Q107X0 134 aa8.19□□□□□ -1.1
PCDHGB1-201ENST00000523390 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
PCDHGB1-201ENST00000523390 H3BPC8 53 aa8.19□□□□□ -1.1
PCDHGB1-201ENST00000523390 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
PCDHGB1-201ENST00000523390 C7orf65Q6ZTY9 151 aa8.18□□□□□ -1.1
PCDHGB1-201ENST00000523390 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
PCDHGB1-201ENST00000523390 K7ERS5 55 aa8.17□□□□□ -1.1
PCDHGB1-201ENST00000523390 SPRR1AP35321 89 aa8.14□□□□□ -1.11
PCDHGB1-201ENST00000523390 Q5XG85 94 aa8.13□□□□□ -1.11
PCDHGB1-201ENST00000523390 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
PCDHGB1-201ENST00000523390 ACYP2P14621 99 aa8.12□□□□□ -1.11
PCDHGB1-201ENST00000523390 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
PCDHGB1-201ENST00000523390 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
PCDHGB1-201ENST00000523390 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
PCDHGB1-201ENST00000523390 ATP11AUNQ6ZP68 121 aa8.06□□□□□ -1.12
PCDHGB1-201ENST00000523390 J3QL48 77 aa8.05□□□□□ -1.12
PCDHGB1-201ENST00000523390 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
PCDHGB1-201ENST00000523390 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
PCDHGB1-201ENST00000523390 A0A1B0GU69 56 aa8.03□□□□□ -1.12
PCDHGB1-201ENST00000523390 PANO1I0J062 215 aa8.03□□□□□ -1.12
PCDHGB1-201ENST00000523390 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
PCDHGB1-201ENST00000523390 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
PCDHGB1-201ENST00000523390 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
PCDHGB1-201ENST00000523390 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
PCDHGB1-201ENST00000523390 COA5Q86WW8 74 aa8□□□□□ -1.13
PCDHGB1-201ENST00000523390 OCR1Q9BZK8 76 aa8□□□□□ -1.13
PCDHGB1-201ENST00000523390 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
PCDHGB1-201ENST00000523390 TENM3Q9P273 2699 aa7.99□□□□□ -1.13
PCDHGB1-201ENST00000523390 IGLV8-61A0A075B6I0 122 aa7.97□□□□□ -1.13
PCDHGB1-201ENST00000523390 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
PCDHGB1-201ENST00000523390 A8MUN3 132 aa7.97□□□□□ -1.13
PCDHGB1-201ENST00000523390 SPRR1BP22528 89 aa7.97□□□□□ -1.13
PCDHGB1-201ENST00000523390 Q6ZR54 194 aa7.96□□□□□ -1.14
PCDHGB1-201ENST00000523390 CSMD2Q7Z408 3487 aa7.95□□□□□ -1.14
PCDHGB1-201ENST00000523390 CD164Q04900 197 aa7.95□□□□□ -1.14
PCDHGB1-201ENST00000523390 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
PCDHGB1-201ENST00000523390 VPS13CQ709C8 3753 aa7.93□□□□□ -1.14
PCDHGB1-201ENST00000523390 PDZD2O15018 2839 aa7.93□□□□□ -1.14
PCDHGB1-201ENST00000523390 OTOGQ6ZRI0 2925 aa7.91□□□□□ -1.14
PCDHGB1-201ENST00000523390 LCE6AA0A183 80 aa7.91□□□□□ -1.14
PCDHGB1-201ENST00000523390 ZFHX3Q15911 3703 aa7.9□□□□□ -1.15
PCDHGB1-201ENST00000523390 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
PCDHGB1-201ENST00000523390 LINC00472Q9H8W2 130 aa7.89□□□□□ -1.15
PCDHGB1-201ENST00000523390 FBN1P35555 2871 aaKnown RBP7.88□□□□□ -1.15
PCDHGB1-201ENST00000523390 FLG2Q5D862 2391 aaPredicted RBP7.88□□□□□ -1.15
PCDHGB1-201ENST00000523390 Q6ZRN7 208 aaPredicted RBP7.87□□□□□ -1.15
PCDHGB1-201ENST00000523390 Q8N1X5 172 aa7.87□□□□□ -1.15
PCDHGB1-201ENST00000523390 VWFP04275 2813 aa7.86□□□□□ -1.15
PCDHGB1-201ENST00000523390 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
PCDHGB1-201ENST00000523390 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
PCDHGB1-201ENST00000523390 KRTAP7-1Q8IUC3 87 aa7.85□□□□□ -1.15
PCDHGB1-201ENST00000523390 SPANXA2-OT1Q8N9U9 137 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms