RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 SFTA2Q6UW10 78 aa4□□□□□ -1.77
HMBOX1-208ENST00000521516 PYGO1Q9Y3Y4 419 aa4□□□□□ -1.77
HMBOX1-208ENST00000521516 SCGB1C2P0DMR2 95 aa3.99□□□□□ -1.77
HMBOX1-208ENST00000521516 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
HMBOX1-208ENST00000521516 PLEKHB2Q96CS7 222 aa3.99□□□□□ -1.77
HMBOX1-208ENST00000521516 KIAA0087Q14695 138 aa3.99□□□□□ -1.77
HMBOX1-208ENST00000521516 LINC00167Q96N53 147 aa3.99□□□□□ -1.77
HMBOX1-208ENST00000521516 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
HMBOX1-208ENST00000521516 TRBV7-7A0A0K0K1E9 115 aa3.98□□□□□ -1.77
HMBOX1-208ENST00000521516 RPL37AP8A6NKH3 93 aa3.98□□□□□ -1.77
HMBOX1-208ENST00000521516 ZNF815PA8K554 130 aa3.98□□□□□ -1.77
HMBOX1-208ENST00000521516 LEPROTO15243 131 aa3.98□□□□□ -1.77
HMBOX1-208ENST00000521516 TMEM170BQ5T4T1 132 aa3.98□□□□□ -1.77
HMBOX1-208ENST00000521516 IGLV4-3A0A075B6K6 122 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 IGHV3OR16-9A0A0B4J2B5 98 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 C9JAW5 83 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 AMELXQ99217 191 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 FAM240AA0A1B0GVK7 77 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 TMEM223A0PJW6 202 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 TIMM21Q9BVV7 248 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 PRO1854Q9UHT4 67 aa3.97□□□□□ -1.77
HMBOX1-208ENST00000521516 A0A1B0GX51 115 aa3.96□□□□□ -1.78
HMBOX1-208ENST00000521516 TEX49A0A1B0GTD5 131 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 J3QQQ9 107 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 MRPS36P82909 103 aaKnown RBP3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 XAGE1AQ9HD64 81 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 TRBV10-2A0A0K0K1G8 114 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 ZNF22P17026 224 aaPredicted RBP3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 PRLHP81277 87 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 C2orf82Q6UX34 121 aa3.95□□□□□ -1.78
HMBOX1-208ENST00000521516 J3KT08 172 aa3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 SPRR4Q96PI1 79 aa3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 IMUPQ9GZP8 106 aa3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 A0A0B4J2C4 111 aa3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 ATXN8Q156A1 80 aa3.94□□□□□ -1.78
HMBOX1-208ENST00000521516 UQCRQO14949 82 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 HERVK_113P63121 156 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 FAM104AQ969W3 186 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 SPANXDQ9BXN6 97 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 C9orf153Q5TBE3 101 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 FAM19A3Q7Z5A8 133 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 V9GYY9 64 aa3.93□□□□□ -1.78
HMBOX1-208ENST00000521516 IGLV5-37A0A075B6J1 123 aa3.92□□□□□ -1.78
HMBOX1-208ENST00000521516 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
HMBOX1-208ENST00000521516 H3BT86 120 aa3.92□□□□□ -1.78
HMBOX1-208ENST00000521516 SPANXCQ9NY87 97 aa3.92□□□□□ -1.78
HMBOX1-208ENST00000521516 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
HMBOX1-208ENST00000521516 A0A0J9YXY3 114 aa3.91□□□□□ -1.78
HMBOX1-208ENST00000521516 TIMM17BO60830 172 aa3.91□□□□□ -1.78
HMBOX1-208ENST00000521516 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
HMBOX1-208ENST00000521516 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
HMBOX1-208ENST00000521516 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
HMBOX1-208ENST00000521516 TRIAP1O43715 76 aa3.9□□□□□ -1.78
HMBOX1-208ENST00000521516 RPL37P61927 97 aaKnown RBP3.9□□□□□ -1.78
HMBOX1-208ENST00000521516 COX7CP15954 63 aa3.9□□□□□ -1.79
HMBOX1-208ENST00000521516 MUSTN1Q8IVN3 82 aa3.9□□□□□ -1.79
HMBOX1-208ENST00000521516 ACYP1P07311 99 aa3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 HIST1H4AP62805 103 aaKnown RBP3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 CDKN2A-AS1Q9UH64 79 aa3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 ZNF706Q9Y5V0 76 aaPredicted RBP3.89□□□□□ -1.79
HMBOX1-208ENST00000521516 IGLV5-39A0A0G2JS06 123 aa3.88□□□□□ -1.79
HMBOX1-208ENST00000521516 H7C2G1 150 aa3.88□□□□□ -1.79
HMBOX1-208ENST00000521516 LST1O00453 97 aa3.88□□□□□ -1.79
HMBOX1-208ENST00000521516 CXCL5P42830 114 aa3.88□□□□□ -1.79
HMBOX1-208ENST00000521516 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
HMBOX1-208ENST00000521516 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 PRSS2P07478 247 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 Q1RN00 199 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 GAGE2AQ6NT46 116 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 LITAFQ99732 161 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 Q5XG85 94 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
HMBOX1-208ENST00000521516 M0R378 163 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 IGLV6-57P01721 117 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 TMEM258P61165 79 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 SMIM1B2RUZ4 78 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 LINC00483Q53H64 154 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
HMBOX1-208ENST00000521516 hADV29S1A0JD25 119 aa3.85□□□□□ -1.79
HMBOX1-208ENST00000521516 ATOX1O00244 68 aa3.85□□□□□ -1.79
HMBOX1-208ENST00000521516 COX6CP09669 75 aa3.85□□□□□ -1.79
HMBOX1-208ENST00000521516 NKAPP1Q8N9T2 125 aa3.85□□□□□ -1.79
HMBOX1-208ENST00000521516 CLEC2BQ92478 149 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms