RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 KNL1Q8NG31 2342 aa2.22□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 MEGF8Q7Z7M0 2845 aa2.22□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 S4R3F8 94 aa2.21□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 TTC28Q96AY4 2481 aa2.2□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 PRLHP81277 87 aa2.19□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 DEFB109BQ30KR1 87 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 DEFB106AQ8N104 65 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 MUC6Q6W4X9 2439 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 POLR2KP53803 58 aaKnown RBP2.17□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 PCNX1Q96RV3 2341 aa2.17□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 ZNF292O60281 2723 aa2.16□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 REV3LO60673 3130 aa2.15□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 POLQO75417 2590 aa2.15□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 GVINP1Q7Z2Y8 2422 aa2.15□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 RPL39P62891 51 aaKnown RBP2.12□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 ARHGAP5-AS1Q96IT6 56 aa2.12□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 CSPG4Q6UVK1 2322 aa2.11□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 ABCA12Q86UK0 2595 aa2.11□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 ABCA2Q9BZC7 2435 aa2.11□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 NOP10Q9NPE3 64 aaKnown RBP2.1□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 F8P00451 2351 aa2.08□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 DSPP15924 2871 aaKnown RBP2.06□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 RPL39LQ96EH5 51 aaKnown RBP2.06□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 HELZ2Q9BYK8 2649 aaKnown RBP2.03□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 TRANK1O15050 2925 aa2.02□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 CHD9Q3L8U1 2897 aa2.01□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 CELSR2Q9HCU4 2923 aa1.98□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 H0YGG7 62 aa1.97□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 M0QY20 66 aa1.95□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 SPINK6Q6UWN8 80 aa1.94□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 TTTY10Q9BZA0 68 aa1.94□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 AKAP6Q13023 2319 aa1.94□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 DEFB135Q30KP9 77 aa1.93□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 CLPSL2Q6UWE3 100 aa1.93□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 SPINK1P00995 79 aa1.92□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 LEAP2Q969E1 77 aa1.92□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 CEP290O15078 2479 aa1.92□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 A8MTW9 85 aa1.91□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 LINC01590Q5TEZ4 76 aa1.9□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 A0A0C4DFX4 3053 aa1.89□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 CSMD3Q7Z407 3707 aa1.89□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 SPTA1P02549 2419 aa1.86□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 M0R2T5 61 aa1.86□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 TENM4Q6N022 2769 aa1.85□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 BDP1A6H8Y1 2624 aa1.85□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 VWFP04275 2813 aa1.84□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 ATRQ13535 2644 aa1.84□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 TOMM7Q9P0U1 55 aa1.84□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 PRRC2CQ9Y520 2896 aaKnown RBP1.84□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 PRCDQ00LT1 54 aa1.83□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 SMR3AQ99954 134 aa1.83□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 PIEZO1Q92508 2521 aa1.83□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 PKD1L2Q7Z442 2459 aa1.81□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 CHD6Q8TD26 2715 aa1.79□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 ANK2Q01484 3957 aa1.78□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 M0QZ58 72 aa1.78□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 AKAP13Q12802 2813 aa1.77□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 HECTD1Q9ULT8 2610 aa1.77□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 EP300Q09472 2414 aaPredicted RBP1.76□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 H3BSH0 61 aa1.76□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 NCOR1O75376 2440 aa1.75□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 U3KQA8 63 aa1.74□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 CREBBPQ92793 2442 aa1.72□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 FBN2P35556 2912 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 C9orf92A6NGG3 77 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 BSNQ9UPA5 3926 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 OTOGQ6ZRI0 2925 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 FRAS1Q86XX4 4008 aa1.67□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 CHD8Q9HCK8 2581 aa1.66□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 PRKDCP78527 4128 aaKnown RBP1.65□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 WNK1Q9H4A3 2382 aa1.65□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 TNRC18O15417 2968 aaPredicted RBP1.64□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 TNP1P09430 55 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 NAV2Q8IVL1 2488 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 NBASA2RRP1 2371 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 TNXBP22105 4242 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 ZNF469Q96JG9 3925 aaPredicted RBP1.61□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 K7EIM0 57 aa1.6□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 DEFB104AQ8WTQ1 72 aa1.6□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 UBR5O95071 2799 aaPredicted RBP1.6□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 PRM1P04553 51 aa1.59□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 HIVEP3Q5T1R4 2406 aa1.58□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 MAP1BP46821 2468 aaKnown RBP1.57□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 H3BNG1 76 aa1.57□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms