RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 KNL1Q8NG31 2342 aa2.22□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 MEGF8Q7Z7M0 2845 aa2.22□□□□□ -2.05
RNU6ATAC39P-201ENST00000516309 S4R3F8 94 aa2.21□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 TTC28Q96AY4 2481 aa2.2□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 PRLHP81277 87 aa2.19□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 MMP24-AS1A0A0U1RRL7 71 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 DEFB109BQ30KR1 87 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 DEFB106AQ8N104 65 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 MUC6Q6W4X9 2439 aa2.18□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 POLR2KP53803 58 aaKnown RBP2.17□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 PCNX1Q96RV3 2341 aa2.17□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 ZNF292O60281 2723 aa2.16□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 REV3LO60673 3130 aa2.15□□□□□ -2.06
RNU6ATAC39P-201ENST00000516309 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 POLQO75417 2590 aa2.15□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 GVINP1Q7Z2Y8 2422 aa2.15□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 RPL39P62891 51 aaKnown RBP2.12□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 ARHGAP5-AS1Q96IT6 56 aa2.12□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 CSPG4Q6UVK1 2322 aa2.11□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 ABCA12Q86UK0 2595 aa2.11□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 ABCA2Q9BZC7 2435 aa2.11□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 NOP10Q9NPE3 64 aaKnown RBP2.1□□□□□ -2.07
RNU6ATAC39P-201ENST00000516309 F8P00451 2351 aa2.08□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 DSPP15924 2871 aaKnown RBP2.06□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 RPL39LQ96EH5 51 aaKnown RBP2.06□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
RNU6ATAC39P-201ENST00000516309 HELZ2Q9BYK8 2649 aaKnown RBP2.03□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 TRANK1O15050 2925 aa2.02□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 CHD9Q3L8U1 2897 aa2.01□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 CELSR2Q9HCU4 2923 aa1.98□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 H0YGG7 62 aa1.97□□□□□ -2.09
RNU6ATAC39P-201ENST00000516309 M0QY20 66 aa1.95□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 SPINK6Q6UWN8 80 aa1.94□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 TTTY10Q9BZA0 68 aa1.94□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 AKAP6Q13023 2319 aa1.94□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 DEFB135Q30KP9 77 aa1.93□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 CLPSL2Q6UWE3 100 aa1.93□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 SPINK1P00995 79 aa1.92□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 LEAP2Q969E1 77 aa1.92□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 CEP290O15078 2479 aa1.92□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 A8MTW9 85 aa1.91□□□□□ -2.1
RNU6ATAC39P-201ENST00000516309 LINC01590Q5TEZ4 76 aa1.9□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 A0A0C4DFX4 3053 aa1.89□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 CSMD3Q7Z407 3707 aa1.89□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 SPTA1P02549 2419 aa1.86□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 M0R2T5 61 aa1.86□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 TENM4Q6N022 2769 aa1.85□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 BDP1A6H8Y1 2624 aa1.85□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 VWFP04275 2813 aa1.84□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 ATRQ13535 2644 aa1.84□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 TOMM7Q9P0U1 55 aa1.84□□□□□ -2.11
RNU6ATAC39P-201ENST00000516309 PRRC2CQ9Y520 2896 aaKnown RBP1.84□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 PRCDQ00LT1 54 aa1.83□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 SMR3AQ99954 134 aa1.83□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 PIEZO1Q92508 2521 aa1.83□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 PKD1L2Q7Z442 2459 aa1.81□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 CHD6Q8TD26 2715 aa1.79□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 ANK2Q01484 3957 aa1.78□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 M0QZ58 72 aa1.78□□□□□ -2.12
RNU6ATAC39P-201ENST00000516309 AKAP13Q12802 2813 aa1.77□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 HECTD1Q9ULT8 2610 aa1.77□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 EP300Q09472 2414 aaPredicted RBP1.76□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 H3BSH0 61 aa1.76□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 NCOR1O75376 2440 aa1.75□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 U3KQA8 63 aa1.74□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 CREBBPQ92793 2442 aa1.72□□□□□ -2.13
RNU6ATAC39P-201ENST00000516309 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 FBN2P35556 2912 aa1.71□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 C9orf92A6NGG3 77 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 BSNQ9UPA5 3926 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 OTOGQ6ZRI0 2925 aa1.68□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 FRAS1Q86XX4 4008 aa1.67□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 CHD8Q9HCK8 2581 aa1.66□□□□□ -2.14
RNU6ATAC39P-201ENST00000516309 PRKDCP78527 4128 aaKnown RBP1.65□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 WNK1Q9H4A3 2382 aa1.65□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 TNRC18O15417 2968 aaPredicted RBP1.64□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 TNP1P09430 55 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 NAV2Q8IVL1 2488 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 NBASA2RRP1 2371 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 TNXBP22105 4242 aa1.63□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 ZNF469Q96JG9 3925 aaPredicted RBP1.61□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 K7EIM0 57 aa1.6□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 DEFB104AQ8WTQ1 72 aa1.6□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 UBR5O95071 2799 aaPredicted RBP1.6□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 PRM1P04553 51 aa1.59□□□□□ -2.15
RNU6ATAC39P-201ENST00000516309 HIVEP3Q5T1R4 2406 aa1.58□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 MAP1BP46821 2468 aaKnown RBP1.57□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 H3BNG1 76 aa1.57□□□□□ -2.16
RNU6ATAC39P-201ENST00000516309 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms