RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 Q8NBF4 154 aa10.16□□□□□ -0.78
SQSTM1-213ENST00000510187 A0A1W2PNM2 257 aa10.15□□□□□ -0.78
SQSTM1-213ENST00000510187 CNBPP62633 177 aaKnown RBP10.14□□□□□ -0.79
SQSTM1-213ENST00000510187 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
SQSTM1-213ENST00000510187 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
SQSTM1-213ENST00000510187 UBE2BP63146 152 aa10.13□□□□□ -0.79
SQSTM1-213ENST00000510187 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
SQSTM1-213ENST00000510187 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
SQSTM1-213ENST00000510187 Q8N9L7 120 aa10.1□□□□□ -0.79
SQSTM1-213ENST00000510187 DNAH17Q9UFH2 4485 aa10.09□□□□□ -0.79
SQSTM1-213ENST00000510187 OXTP01178 125 aa10.09□□□□□ -0.79
SQSTM1-213ENST00000510187 OCR1Q9BZK8 76 aa10.09□□□□□ -0.79
SQSTM1-213ENST00000510187 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
SQSTM1-213ENST00000510187 ATP5EP56381 51 aaPredicted RBP10.08□□□□□ -0.8
SQSTM1-213ENST00000510187 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
SQSTM1-213ENST00000510187 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
SQSTM1-213ENST00000510187 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
SQSTM1-213ENST00000510187 A0A096LNI7 61 aa10.07□□□□□ -0.8
SQSTM1-213ENST00000510187 F8WEM9 126 aa10.07□□□□□ -0.8
SQSTM1-213ENST00000510187 SMIM29Q86T20 159 aa10.07□□□□□ -0.8
SQSTM1-213ENST00000510187 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
SQSTM1-213ENST00000510187 TMEM254Q8TBM7 123 aa10.07□□□□□ -0.8
SQSTM1-213ENST00000510187 RYR2Q92736 4967 aa10.05□□□□□ -0.8
SQSTM1-213ENST00000510187 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
SQSTM1-213ENST00000510187 LINC00336Q6ZUF6 198 aa10.04□□□□□ -0.8
SQSTM1-213ENST00000510187 IGLV8-61A0A075B6I0 122 aa10.04□□□□□ -0.8
SQSTM1-213ENST00000510187 PKIGQ9Y2B9 76 aa10.03□□□□□ -0.8
SQSTM1-213ENST00000510187 FAT2Q9NYQ8 4349 aa10.02□□□□□ -0.81
SQSTM1-213ENST00000510187 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
SQSTM1-213ENST00000510187 A0A1W2PNN7 141 aa10.02□□□□□ -0.81
SQSTM1-213ENST00000510187 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
SQSTM1-213ENST00000510187 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
SQSTM1-213ENST00000510187 H0Y9J4 135 aa9.99□□□□□ -0.81
SQSTM1-213ENST00000510187 DSCR10P59022 87 aa9.99□□□□□ -0.81
SQSTM1-213ENST00000510187 IGFL1Q6UW32 110 aa9.99□□□□□ -0.81
SQSTM1-213ENST00000510187 HECTD4Q9Y4D8 3996 aa9.97□□□□□ -0.81
SQSTM1-213ENST00000510187 PRLHP81277 87 aa9.97□□□□□ -0.81
SQSTM1-213ENST00000510187 Q5XG85 94 aa9.97□□□□□ -0.81
SQSTM1-213ENST00000510187 CHTF8P0CG12 524 aa9.96□□□□□ -0.81
SQSTM1-213ENST00000510187 SPRR1BP22528 89 aa9.96□□□□□ -0.82
SQSTM1-213ENST00000510187 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
SQSTM1-213ENST00000510187 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
SQSTM1-213ENST00000510187 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
SQSTM1-213ENST00000510187 HIGD2AQ9BW72 106 aa9.94□□□□□ -0.82
SQSTM1-213ENST00000510187 K7EQZ3 153 aa9.93□□□□□ -0.82
SQSTM1-213ENST00000510187 UBE2AP49459 152 aa9.93□□□□□ -0.82
SQSTM1-213ENST00000510187 PANO1I0J062 215 aa9.92□□□□□ -0.82
SQSTM1-213ENST00000510187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
SQSTM1-213ENST00000510187 A0A1B0GVY2 172 aa9.91□□□□□ -0.82
SQSTM1-213ENST00000510187 HCG22E2RYF7 251 aa9.91□□□□□ -0.82
SQSTM1-213ENST00000510187 SPACA4Q8TDM5 124 aa9.91□□□□□ -0.82
SQSTM1-213ENST00000510187 FAM30AQ9NZY2 134 aa9.91□□□□□ -0.82
SQSTM1-213ENST00000510187 RYR3Q15413 4870 aa9.91□□□□□ -0.82
SQSTM1-213ENST00000510187 PKD1P98161 4303 aa9.91□□□□□ -0.82
SQSTM1-213ENST00000510187 SMIM26A0A096LP01 95 aa9.9□□□□□ -0.82
SQSTM1-213ENST00000510187 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
SQSTM1-213ENST00000510187 DNAH5Q8TE73 4624 aa9.89□□□□□ -0.83
SQSTM1-213ENST00000510187 A0A087WSZ3 146 aa9.87□□□□□ -0.83
SQSTM1-213ENST00000510187 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
SQSTM1-213ENST00000510187 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
SQSTM1-213ENST00000510187 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
SQSTM1-213ENST00000510187 ZCCHC13Q8WW36 166 aaKnown RBP9.85□□□□□ -0.83
SQSTM1-213ENST00000510187 A0A0G2JQZ4 141 aa9.85□□□□□ -0.83
SQSTM1-213ENST00000510187 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
SQSTM1-213ENST00000510187 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
SQSTM1-213ENST00000510187 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
SQSTM1-213ENST00000510187 Q6ZSA8 131 aa9.82□□□□□ -0.84
SQSTM1-213ENST00000510187 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
SQSTM1-213ENST00000510187 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-213ENST00000510187 CIRBP-AS1Q8TBR5 109 aa9.79□□□□□ -0.84
SQSTM1-213ENST00000510187 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-213ENST00000510187 DEFB116Q30KQ4 102 aa9.77□□□□□ -0.85
SQSTM1-213ENST00000510187 PRR15Q8IV56 129 aa9.77□□□□□ -0.85
SQSTM1-213ENST00000510187 LINC00472Q9H8W2 130 aa9.77□□□□□ -0.85
SQSTM1-213ENST00000510187 A8MWP4 228 aa9.76□□□□□ -0.85
SQSTM1-213ENST00000510187 WFDC13Q8IUB5 93 aa9.75□□□□□ -0.85
SQSTM1-213ENST00000510187 NDUFB1O75438 58 aa9.74□□□□□ -0.85
SQSTM1-213ENST00000510187 MP68P56378 58 aa9.74□□□□□ -0.85
SQSTM1-213ENST00000510187 DNAH8Q96JB1 4490 aa9.74□□□□□ -0.85
SQSTM1-213ENST00000510187 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
SQSTM1-213ENST00000510187 RPL37AP61513 92 aaKnown RBP9.73□□□□□ -0.85
SQSTM1-213ENST00000510187 H3BPC8 53 aa9.73□□□□□ -0.85
SQSTM1-213ENST00000510187 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
SQSTM1-213ENST00000510187 LINC00483Q53H64 154 aa9.71□□□□□ -0.85
SQSTM1-213ENST00000510187 CYP4F30PQ9H0H9 118 aa9.7□□□□□ -0.86
SQSTM1-213ENST00000510187 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
SQSTM1-213ENST00000510187 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
SQSTM1-213ENST00000510187 ZNF706Q9Y5V0 76 aaPredicted RBP9.7□□□□□ -0.86
SQSTM1-213ENST00000510187 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
SQSTM1-213ENST00000510187 TRAV22A0A0B4J277 110 aa9.67□□□□□ -0.86
SQSTM1-213ENST00000510187 PSORS1C2Q9UIG4 136 aa9.66□□□□□ -0.86
SQSTM1-213ENST00000510187 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
SQSTM1-213ENST00000510187 H0Y9P7 68 aa9.64□□□□□ -0.87
SQSTM1-213ENST00000510187 C1orf64Q8NEQ6 169 aa9.64□□□□□ -0.87
SQSTM1-213ENST00000510187 LINC00208Q96KT6 92 aa9.62□□□□□ -0.87
SQSTM1-213ENST00000510187 SPANXA2-OT1Q8N9U9 137 aa9.62□□□□□ -0.87
SQSTM1-213ENST00000510187 Q96NJ1 140 aa9.62□□□□□ -0.87
SQSTM1-213ENST00000510187 IGLV9-49A0A0B4J1Y8 123 aa9.61□□□□□ -0.87
SQSTM1-213ENST00000510187 MOBPQ13875 183 aa9.6□□□□□ -0.87
SQSTM1-213ENST00000510187 ASB16-AS1Q495Z4 193 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms