RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PRO0255Q9UI72 69 aa0.89□□□□□ -2.27
CKS1BP2-201ENST00000497342 TEX49A0A1B0GTD5 131 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 CPSF4LA6NMK7 179 aaKnown RBP0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 HIGD1CA8MV81 97 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 CYB5AP00167 134 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 PPYP01298 95 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 POLR2JP52435 117 aaKnown RBP0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 DEFB1P60022 68 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 RPL38P63173 70 aaKnown RBP0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 SPATA45Q537H7 98 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 TSKUQ8WUA8 353 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 MRPL57Q9BQC6 102 aaKnown RBP0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 LIMD2Q9BT23 127 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 ATG5Q9H1Y0 275 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 TMEM242Q9NWH2 141 aa0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 MRPL36Q9P0J6 103 aaKnown RBP0.88□□□□□ -2.27
CKS1BP2-201ENST00000497342 C20orf202A1L168 122 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 KRTAP12-3P60328 96 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 PPP3R1P63098 170 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 COX6A2Q02221 97 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 RPL39P5Q59GN2 51 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 LCE1CQ5T751 118 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 LCE1BQ5T7P3 118 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 ACBD7Q8N6N7 88 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 TMEM167AQ8TBQ9 72 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 TMEM263Q8WUH6 116 aaKnown RBP0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 OBSCN-AS1Q96MR7 158 aa0.87□□□□□ -2.27
CKS1BP2-201ENST00000497342 OBSCNQ5VST9 7968 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 TRAV30A0A087WSZ9 112 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 IGKV2-40A0A087WW87 121 aaPredicted RBP0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 A8MTW9 85 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 H3BQ15 152 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 IGKV2D-40P01614 121 aaPredicted RBP0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 IGKCP01834 107 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 S100A8P05109 93 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 IL5P05113 134 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 HTN1P15515 57 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 XAF1Q6GPH4 301 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 ZNF818PQ6ZRF7 136 aa0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 C8orf59Q8N0T1 100 aaPredicted RBP0.86□□□□□ -2.27
CKS1BP2-201ENST00000497342 A0A096LNI7 61 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 TRBV6-7A0A0A0MS04 114 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 CCKP06307 115 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 MT1BP07438 61 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 LINC00032P0C843 101 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 HSD52Q0P140 79 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 CATR1Q13166 79 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 IQCJQ1A5X6 159 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 LINC00575Q6W349 94 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 KRTAP5-2Q701N4 177 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 C5orf38Q86SI9 138 aa0.85□□□□□ -2.27
CKS1BP2-201ENST00000497342 TRBV10-3A0A0K0K1G6 114 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 A6NIN4 97 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 TMEM262E9PQX1 116 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 H3BQF6 201 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 SIX6O95475 246 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 FXYD4P59646 89 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 RBM3P98179 157 aaKnown RBP0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 SPINK13Q1W4C9 94 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 IFI27L1Q96BM0 104 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 AQP10Q96PS8 301 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 LINC00474Q9P2X8 69 aa0.84□□□□□ -2.27
CKS1BP2-201ENST00000497342 TRAV12-3A0A0B4J271 114 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 K7EIM0 57 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 SSSCA1O60232 199 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 IL7P13232 177 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 NPC2P61916 151 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 UBE2G1P62253 170 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 PRCDQ00LT1 54 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 MRPL54Q6P161 138 aaKnown RBP0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 CYP4F30PQ9H0H9 118 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 UBE2D4Q9Y2X8 147 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 V9GYS6 101 aa0.83□□□□□ -2.28
CKS1BP2-201ENST00000497342 TRGV1A0A0A0MS02 117 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 PIGBOS1A0A0B4J2F0 54 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 TMEM218A2RU14 115 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 SPINK4O60575 86 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 IFITM1P13164 125 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 ATP5EP56381 51 aaPredicted RBP0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 FXYD6P3P58550 94 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q0VG73 95 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 KLKP1Q107X0 134 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 SPAG11AQ6PDA7 123 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 ENHOQ6UWT2 76 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 DSCR8Q96T75 97 aa0.82□□□□□ -2.28
CKS1BP2-201ENST00000497342 UBE2L5PA0A1B0GUS4 154 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 LOC101927531A0A1B0GV80 90 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 TCRBV3S1A0A5B6 114 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 IGLC7A0M8Q6 106 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 IGKV2-29A2NJV5 120 aaPredicted RBP0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 DNAL4O96015 105 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 ARL14EPLP0DKL9 152 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 S100A3P33764 101 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 UBE2L3P68036 154 aaKnown RBP0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 C9orf153Q5TBE3 101 aa0.81□□□□□ -2.28
CKS1BP2-201ENST00000497342 TRAV23DV6A0A075B6W5 121 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 HCG22E2RYF7 251 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 SNCGO76070 127 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 SPINK8P0C7L1 97 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 849.4 ms