RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 DEFB130BP0DP73 79 aa1.04□□□□□ -2.24
VPS36-206ENST00000497149 DEFB130AP0DP74 79 aa1.04□□□□□ -2.24
VPS36-206ENST00000497149 SPRR1BP22528 89 aa1.04□□□□□ -2.24
VPS36-206ENST00000497149 MROH2BQ7Z745 1585 aa1.04□□□□□ -2.24
VPS36-206ENST00000497149 WT1-ASQ06250 92 aa1.03□□□□□ -2.24
VPS36-206ENST00000497149 DUOX1Q9NRD9 1551 aa1.03□□□□□ -2.24
VPS36-206ENST00000497149 A0A0D9SG42 100 aa1.02□□□□□ -2.25
VPS36-206ENST00000497149 RPS27P42677 84 aaKnown RBP1.02□□□□□ -2.25
VPS36-206ENST00000497149 LELP1Q5T871 98 aa1.02□□□□□ -2.25
VPS36-206ENST00000497149 CSPG4Q6UVK1 2322 aa1.02□□□□□ -2.25
VPS36-206ENST00000497149 RPS27LQ71UM5 84 aaKnown RBP1.02□□□□□ -2.25
VPS36-206ENST00000497149 GVINP1Q7Z2Y8 2422 aa1.02□□□□□ -2.25
VPS36-206ENST00000497149 WFDC10BQ8IUB3 73 aa1.02□□□□□ -2.25
VPS36-206ENST00000497149 DSPP15924 2871 aaKnown RBP1.02□□□□□ -2.25
VPS36-206ENST00000497149 AKAP6Q13023 2319 aa1.01□□□□□ -2.25
VPS36-206ENST00000497149 GCC2Q8IWJ2 1684 aa1.01□□□□□ -2.25
VPS36-206ENST00000497149 IGLV5-48A0A075B6I7 105 aa1.01□□□□□ -2.25
VPS36-206ENST00000497149 DEFB131AP59861 70 aa1.01□□□□□ -2.25
VPS36-206ENST00000497149 REV3LO60673 3130 aa1.01□□□□□ -2.25
VPS36-206ENST00000497149 CLTCL1P53675 1640 aa1□□□□□ -2.25
VPS36-206ENST00000497149 MEGF8Q7Z7M0 2845 aa1□□□□□ -2.25
VPS36-206ENST00000497149 ALMS1Q8TCU4 4167 aa1□□□□□ -2.25
VPS36-206ENST00000497149 POLR2KP53803 58 aaKnown RBP1□□□□□ -2.25
VPS36-206ENST00000497149 PCNX1Q96RV3 2341 aa1□□□□□ -2.25
VPS36-206ENST00000497149 CREBBPQ92793 2442 aa0.99□□□□□ -2.25
VPS36-206ENST00000497149 ABCA2Q9BZC7 2435 aa0.99□□□□□ -2.25
VPS36-206ENST00000497149 KAAG1Q9UBP8 84 aa0.99□□□□□ -2.25
VPS36-206ENST00000497149 IGF2RP11717 2491 aa0.99□□□□□ -2.25
VPS36-206ENST00000497149 CHD9Q3L8U1 2897 aa0.98□□□□□ -2.25
VPS36-206ENST00000497149 KLK9Q2XQG4 91 aa0.98□□□□□ -2.25
VPS36-206ENST00000497149 DEFB109BQ30KR1 87 aa0.98□□□□□ -2.25
VPS36-206ENST00000497149 TRANK1O15050 2925 aa0.98□□□□□ -2.25
VPS36-206ENST00000497149 FBN2P35556 2912 aa0.96□□□□□ -2.26
VPS36-206ENST00000497149 SPTA1P02549 2419 aa0.96□□□□□ -2.26
VPS36-206ENST00000497149 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
VPS36-206ENST00000497149 PRLHP81277 87 aa0.96□□□□□ -2.26
VPS36-206ENST00000497149 ARHGAP5-AS1Q96IT6 56 aa0.96□□□□□ -2.26
VPS36-206ENST00000497149 NOP10Q9NPE3 64 aaKnown RBP0.95□□□□□ -2.26
VPS36-206ENST00000497149 TTC28Q96AY4 2481 aa0.95□□□□□ -2.26
VPS36-206ENST00000497149 POLQO75417 2590 aa0.95□□□□□ -2.26
VPS36-206ENST00000497149 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
VPS36-206ENST00000497149 CELSR2Q9HCU4 2923 aa0.94□□□□□ -2.26
VPS36-206ENST00000497149 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
VPS36-206ENST00000497149 S4R3F8 94 aa0.93□□□□□ -2.26
VPS36-206ENST00000497149 SRRM2Q9UQ35 2752 aaKnown RBP0.92□□□□□ -2.26
VPS36-206ENST00000497149 ATRQ13535 2644 aa0.92□□□□□ -2.26
VPS36-206ENST00000497149 PKD1L2Q7Z442 2459 aa0.92□□□□□ -2.26
VPS36-206ENST00000497149 MMP24-AS1A0A0U1RRL7 71 aa0.91□□□□□ -2.26
VPS36-206ENST00000497149 A0A0C4DFX4 3053 aa0.91□□□□□ -2.26
VPS36-206ENST00000497149 CHD8Q9HCK8 2581 aa0.91□□□□□ -2.26
VPS36-206ENST00000497149 BDP1A6H8Y1 2624 aa0.9□□□□□ -2.26
VPS36-206ENST00000497149 CEP290O15078 2479 aa0.9□□□□□ -2.27
VPS36-206ENST00000497149 DEFB106AQ8N104 65 aa0.9□□□□□ -2.27
VPS36-206ENST00000497149 RPL39LQ96EH5 51 aaKnown RBP0.9□□□□□ -2.27
VPS36-206ENST00000497149 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
VPS36-206ENST00000497149 ZNF469Q96JG9 3925 aaPredicted RBP0.9□□□□□ -2.27
VPS36-206ENST00000497149 A8MTW9 85 aa0.89□□□□□ -2.27
VPS36-206ENST00000497149 H0YGG7 62 aa0.89□□□□□ -2.27
VPS36-206ENST00000497149 PRRC2CQ9Y520 2896 aaKnown RBP0.89□□□□□ -2.27
VPS36-206ENST00000497149 HECTD1Q9ULT8 2610 aa0.88□□□□□ -2.27
VPS36-206ENST00000497149 LINC01590Q5TEZ4 76 aa0.88□□□□□ -2.27
VPS36-206ENST00000497149 NCOR1O75376 2440 aa0.87□□□□□ -2.27
VPS36-206ENST00000497149 SPINK6Q6UWN8 80 aa0.87□□□□□ -2.27
VPS36-206ENST00000497149 UBR5O95071 2799 aaPredicted RBP0.87□□□□□ -2.27
VPS36-206ENST00000497149 TENM4Q6N022 2769 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 VWFP04275 2813 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 M0QY20 66 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 CLPSL2Q6UWE3 100 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 LEAP2Q969E1 77 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 CHD6Q8TD26 2715 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 ACACAQ13085 2346 aa0.86□□□□□ -2.27
VPS36-206ENST00000497149 PIEZO1Q92508 2521 aa0.85□□□□□ -2.27
VPS36-206ENST00000497149 SPINK1P00995 79 aa0.85□□□□□ -2.27
VPS36-206ENST00000497149 PRCDQ00LT1 54 aa0.85□□□□□ -2.27
VPS36-206ENST00000497149 TTTY10Q9BZA0 68 aa0.85□□□□□ -2.27
VPS36-206ENST00000497149 TOMM7Q9P0U1 55 aa0.85□□□□□ -2.27
VPS36-206ENST00000497149 NBASA2RRP1 2371 aa0.85□□□□□ -2.27
VPS36-206ENST00000497149 APCP25054 2843 aa0.84□□□□□ -2.27
VPS36-206ENST00000497149 M0QZ58 72 aa0.83□□□□□ -2.28
VPS36-206ENST00000497149 EP300Q09472 2414 aaPredicted RBP0.83□□□□□ -2.28
VPS36-206ENST00000497149 NAV2Q8IVL1 2488 aa0.82□□□□□ -2.28
VPS36-206ENST00000497149 DEFB135Q30KP9 77 aa0.82□□□□□ -2.28
VPS36-206ENST00000497149 AKAP13Q12802 2813 aa0.82□□□□□ -2.28
VPS36-206ENST00000497149 CHD7Q9P2D1 2997 aa0.81□□□□□ -2.28
VPS36-206ENST00000497149 H3BSH0 61 aa0.81□□□□□ -2.28
VPS36-206ENST00000497149 COL6A5A8TX70 2615 aa0.81□□□□□ -2.28
VPS36-206ENST00000497149 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
VPS36-206ENST00000497149 M0R2T5 61 aa0.8□□□□□ -2.28
VPS36-206ENST00000497149 CELSR1Q9NYQ6 3014 aa0.8□□□□□ -2.28
VPS36-206ENST00000497149 WNK1Q9H4A3 2382 aa0.79□□□□□ -2.28
VPS36-206ENST00000497149 DMBT1Q9UGM3 2413 aaPredicted RBP0.79□□□□□ -2.28
VPS36-206ENST00000497149 PTPN13Q12923 2485 aa0.79□□□□□ -2.28
VPS36-206ENST00000497149 K7EIM0 57 aa0.79□□□□□ -2.28
VPS36-206ENST00000497149 U3KQA8 63 aa0.79□□□□□ -2.28
VPS36-206ENST00000497149 HIVEP3Q5T1R4 2406 aa0.79□□□□□ -2.28
VPS36-206ENST00000497149 CSMD3Q7Z407 3707 aa0.78□□□□□ -2.28
VPS36-206ENST00000497149 UNC79Q9P2D8 2635 aa0.78□□□□□ -2.28
VPS36-206ENST00000497149 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
VPS36-206ENST00000497149 SMR3AQ99954 134 aa0.78□□□□□ -2.28
VPS36-206ENST00000497149 RIF1Q5UIP0 2472 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms