RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SPAG11BQ08648 103 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 WFDC2Q14508 124 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 SPAG11AQ6PDA7 123 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 COX6B2Q6YFQ2 88 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 TTC9CQ8N5M4 171 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 DEFB108BQ8NET1 73 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 ARL11Q969Q4 196 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 RERGLQ9H628 205 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 LENEPQ9Y5L5 61 aa-0.05□□□□□ -2.42
ITGB1-216ENST00000493758 M0R135 149 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 MT1GP13640 62 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 HMGA1P17096 107 aaKnown RBP-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 MT1XP80297 61 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 KRTAP19-8Q3LI54 63 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 Q6AWC8 147 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 TSC22D3Q99576 134 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 NAA60Q9H7X0 242 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 SERP1Q9Y6X1 66 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 V9GYH0 126 aa-0.06□□□□□ -2.42
ITGB1-216ENST00000493758 GNG7O60262 68 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 S100A12P80511 92 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 COX17Q14061 63 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 MEIG1Q5JSS6 88 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 Q8IZM0 81 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 Q8N8P6 123 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 SNRNP25Q9BV90 132 aaKnown RBP-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 LINC00470Q9BZP3 86 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 FAM107BQ9H098 131 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 DPH3P1Q9H4G8 78 aa-0.07□□□□□ -2.42
ITGB1-216ENST00000493758 BCE1O60756 84 aa-0.08□□□□□ -2.42
ITGB1-216ENST00000493758 TMEM170BQ5T4T1 132 aa-0.08□□□□□ -2.42
ITGB1-216ENST00000493758 LSM10Q969L4 123 aaKnown RBP-0.08□□□□□ -2.42
ITGB1-216ENST00000493758 PPP3R2Q96LZ3 170 aa-0.08□□□□□ -2.42
ITGB1-216ENST00000493758 MIF4GDA9UHW6 222 aaKnown RBP-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 H0YAA0 97 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 H3BSH0 61 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 NDUFA2O43678 99 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 APOC3P02656 99 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 DCDP81605 110 aaKnown RBP-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 Q56UQ5 140 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 NCMAPQ5T1S8 102 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 TP53AIP1Q9HCN2 124 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 TCHHQ07283 1943 aa-0.09□□□□□ -2.42
ITGB1-216ENST00000493758 FXYD6-FXYD2A0A087WZ82 144 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 UQCR11O14957 56 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 DEFB4AO15263 64 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 IFNGP01579 166 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 HMGN1P05114 100 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 DEFB136Q30KP8 78 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 BAGE2Q86Y30 109 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 MGST2Q99735 147 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 DYNLRB1Q9NP97 96 aa-0.1□□□□□ -2.43
ITGB1-216ENST00000493758 F8VRH5 84 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 APOC2P02655 101 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 TPPP2P59282 170 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 BTG2P78543 158 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 CATR1Q13166 79 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 PIGYQ3MUY2 71 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 Q6JHZ5 121 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 C8orf59Q8N0T1 100 aaPredicted RBP-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 MT1LQ93083 61 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 AMELXQ99217 191 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 NDUFA4L2Q9NRX3 87 aa-0.11□□□□□ -2.43
ITGB1-216ENST00000493758 TRBV7-3A0A075B6L6 115 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 TRBV6-1A0A0K0K1D8 114 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 LOC285095A0A1B0GVY8 99 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 IGLC7A0M8Q6 106 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 K7EP13 123 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 SSSCA1O60232 199 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 MT1AP04731 61 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 FGF7P21781 194 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 SPRR1AP35321 89 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 DEFB135Q30KP9 77 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 MYOZ3Q8TDC0 251 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 C1orf54Q8WWF1 131 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 SPANXDQ9BXN6 97 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 FAIMQ9NVQ4 179 aa-0.12□□□□□ -2.43
ITGB1-216ENST00000493758 DEFB131BA0A096LNP1 70 aa-0.13□□□□□ -2.43
ITGB1-216ENST00000493758 TNFP01375 233 aa-0.13□□□□□ -2.43
ITGB1-216ENST00000493758 AKAIN1P0CW23 69 aa-0.13□□□□□ -2.43
ITGB1-216ENST00000493758 C5orf38Q86SI9 138 aa-0.13□□□□□ -2.43
ITGB1-216ENST00000493758 TSLPQ969D9 159 aa-0.13□□□□□ -2.43
ITGB1-216ENST00000493758 H3BUX3 64 aa-0.14□□□□□ -2.43
ITGB1-216ENST00000493758 I3L2K1 104 aa-0.14□□□□□ -2.43
ITGB1-216ENST00000493758 HMGN4O00479 90 aa-0.14□□□□□ -2.43
ITGB1-216ENST00000493758 COMMD6Q7Z4G1 85 aa-0.14□□□□□ -2.43
ITGB1-216ENST00000493758 LINC01558Q9Y6Z2 57 aa-0.14□□□□□ -2.43
ITGB1-216ENST00000493758 SFT2D2O95562 160 aa-0.15□□□□□ -2.43
ITGB1-216ENST00000493758 MRPL54Q6P161 138 aaKnown RBP-0.15□□□□□ -2.43
ITGB1-216ENST00000493758 LINC00472Q9H8W2 130 aa-0.15□□□□□ -2.43
ITGB1-216ENST00000493758 UQCR10Q9UDW1 63 aa-0.15□□□□□ -2.43
ITGB1-216ENST00000493758 LOC100130705A0A1B0GUX0 176 aa-0.16□□□□□ -2.44
ITGB1-216ENST00000493758 ATP6V1G2-DDX39BF2Z307 99 aa-0.16□□□□□ -2.44
ITGB1-216ENST00000493758 CHKB-CPT1BH3BT56 60 aa-0.16□□□□□ -2.44
ITGB1-216ENST00000493758 MGPP08493 103 aa-0.16□□□□□ -2.44
ITGB1-216ENST00000493758 KRTAP19-5Q3LI72 72 aa-0.16□□□□□ -2.44
ITGB1-216ENST00000493758 C9orf153Q5TBE3 101 aa-0.16□□□□□ -2.44
ITGB1-216ENST00000493758 PP6455Q8WZ26 134 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms