RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 PIEZO2Q9H5I5 2752 aa1.02□□□□□ -2.25
SOX2-OT-207ENST00000476964 H3BUA1 57 aa1.02□□□□□ -2.25
SOX2-OT-207ENST00000476964 WT1-ASQ06250 92 aa1.02□□□□□ -2.25
SOX2-OT-207ENST00000476964 RPL39LQ96EH5 51 aaKnown RBP1.02□□□□□ -2.25
SOX2-OT-207ENST00000476964 PLCE1Q9P212 2302 aa1.01□□□□□ -2.25
SOX2-OT-207ENST00000476964 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
SOX2-OT-207ENST00000476964 PTPRQQ9UMZ3 2332 aa1.01□□□□□ -2.25
SOX2-OT-207ENST00000476964 MMP24-AS1A0A0U1RRL7 71 aa1□□□□□ -2.25
SOX2-OT-207ENST00000476964 DEFB131AP59861 70 aa1□□□□□ -2.25
SOX2-OT-207ENST00000476964 LEAP2Q969E1 77 aa1□□□□□ -2.25
SOX2-OT-207ENST00000476964 TOMM7Q9P0U1 55 aa0.99□□□□□ -2.25
SOX2-OT-207ENST00000476964 USF3Q68DE3 2245 aa0.99□□□□□ -2.25
SOX2-OT-207ENST00000476964 IGLV5-48A0A075B6I7 105 aa0.98□□□□□ -2.25
SOX2-OT-207ENST00000476964 SPINK1P00995 79 aa0.98□□□□□ -2.25
SOX2-OT-207ENST00000476964 POLR2KP53803 58 aaKnown RBP0.98□□□□□ -2.25
SOX2-OT-207ENST00000476964 PTPRZ1P23471 2315 aaPredicted RBP0.97□□□□□ -2.25
SOX2-OT-207ENST00000476964 S4R3F8 94 aa0.97□□□□□ -2.25
SOX2-OT-207ENST00000476964 KNL1Q8NG31 2342 aa0.97□□□□□ -2.25
SOX2-OT-207ENST00000476964 DEFB109BQ30KR1 87 aa0.96□□□□□ -2.26
SOX2-OT-207ENST00000476964 NOP10Q9NPE3 64 aaKnown RBP0.96□□□□□ -2.26
SOX2-OT-207ENST00000476964 ASH1LQ9NR48 2969 aaKnown RBP0.96□□□□□ -2.26
SOX2-OT-207ENST00000476964 ALMS1Q8TCU4 4167 aa0.96□□□□□ -2.26
SOX2-OT-207ENST00000476964 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
SOX2-OT-207ENST00000476964 TPRP12270 2363 aaKnown RBP0.95□□□□□ -2.26
SOX2-OT-207ENST00000476964 LINC01590Q5TEZ4 76 aa0.95□□□□□ -2.26
SOX2-OT-207ENST00000476964 H0YGG7 62 aa0.94□□□□□ -2.26
SOX2-OT-207ENST00000476964 PRCDQ00LT1 54 aa0.94□□□□□ -2.26
SOX2-OT-207ENST00000476964 IGF2RP11717 2491 aa0.94□□□□□ -2.26
SOX2-OT-207ENST00000476964 WNK2Q9Y3S1 2297 aa0.94□□□□□ -2.26
SOX2-OT-207ENST00000476964 PDE4DIPQ5VU43 2346 aa0.93□□□□□ -2.26
SOX2-OT-207ENST00000476964 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
SOX2-OT-207ENST00000476964 M0QY20 66 aa0.93□□□□□ -2.26
SOX2-OT-207ENST00000476964 DEFB104AQ8WTQ1 72 aa0.93□□□□□ -2.26
SOX2-OT-207ENST00000476964 A8MTW9 85 aa0.92□□□□□ -2.26
SOX2-OT-207ENST00000476964 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
SOX2-OT-207ENST00000476964 FBN2P35556 2912 aa0.92□□□□□ -2.26
SOX2-OT-207ENST00000476964 PKDREJQ9NTG1 2253 aa0.91□□□□□ -2.26
SOX2-OT-207ENST00000476964 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
SOX2-OT-207ENST00000476964 TTC28Q96AY4 2481 aa0.9□□□□□ -2.27
SOX2-OT-207ENST00000476964 F8P00451 2351 aa0.89□□□□□ -2.27
SOX2-OT-207ENST00000476964 DEFB135Q30KP9 77 aa0.89□□□□□ -2.27
SOX2-OT-207ENST00000476964 PCNX1Q96RV3 2341 aa0.89□□□□□ -2.27
SOX2-OT-207ENST00000476964 ZNF469Q96JG9 3925 aaPredicted RBP0.88□□□□□ -2.27
SOX2-OT-207ENST00000476964 CLPSL2Q6UWE3 100 aa0.88□□□□□ -2.27
SOX2-OT-207ENST00000476964 SPTBN2O15020 2390 aa0.88□□□□□ -2.27
SOX2-OT-207ENST00000476964 CACNA1HO95180 2353 aa0.88□□□□□ -2.27
SOX2-OT-207ENST00000476964 CSPG4Q6UVK1 2322 aa0.87□□□□□ -2.27
SOX2-OT-207ENST00000476964 SPTBN1Q01082 2364 aaKnown RBP0.87□□□□□ -2.27
SOX2-OT-207ENST00000476964 ABCA2Q9BZC7 2435 aa0.87□□□□□ -2.27
SOX2-OT-207ENST00000476964 POLQO75417 2590 aa0.85□□□□□ -2.27
SOX2-OT-207ENST00000476964 SPINK6Q6UWN8 80 aa0.85□□□□□ -2.27
SOX2-OT-207ENST00000476964 ZNF292O60281 2723 aa0.84□□□□□ -2.28
SOX2-OT-207ENST00000476964 ABCA12Q86UK0 2595 aa0.83□□□□□ -2.28
SOX2-OT-207ENST00000476964 GVINP1Q7Z2Y8 2422 aa0.83□□□□□ -2.28
SOX2-OT-207ENST00000476964 M0R2T5 61 aa0.83□□□□□ -2.28
SOX2-OT-207ENST00000476964 TMEM167AQ8TBQ9 72 aa0.82□□□□□ -2.28
SOX2-OT-207ENST00000476964 CEP290O15078 2479 aa0.82□□□□□ -2.28
SOX2-OT-207ENST00000476964 MEGF8Q7Z7M0 2845 aa0.82□□□□□ -2.28
SOX2-OT-207ENST00000476964 RPL39P5Q59GN2 51 aa0.81□□□□□ -2.28
SOX2-OT-207ENST00000476964 TRANK1O15050 2925 aa0.8□□□□□ -2.28
SOX2-OT-207ENST00000476964 AKAP6Q13023 2319 aa0.8□□□□□ -2.28
SOX2-OT-207ENST00000476964 REV3LO60673 3130 aa0.8□□□□□ -2.28
SOX2-OT-207ENST00000476964 DSPP15924 2871 aaKnown RBP0.79□□□□□ -2.28
SOX2-OT-207ENST00000476964 DEFB108AA8MXU0 73 aa0.79□□□□□ -2.28
SOX2-OT-207ENST00000476964 K7EIM0 57 aa0.79□□□□□ -2.28
SOX2-OT-207ENST00000476964 H3BNG1 76 aa0.78□□□□□ -2.28
SOX2-OT-207ENST00000476964 M0QZ58 72 aa0.78□□□□□ -2.28
SOX2-OT-207ENST00000476964 TENM3Q9P273 2699 aa0.78□□□□□ -2.29
SOX2-OT-207ENST00000476964 APCP25054 2843 aa0.76□□□□□ -2.29
SOX2-OT-207ENST00000476964 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
SOX2-OT-207ENST00000476964 TNP1P09430 55 aa0.76□□□□□ -2.29
SOX2-OT-207ENST00000476964 DEFB110Q30KQ9 67 aa0.76□□□□□ -2.29
SOX2-OT-207ENST00000476964 SMR3AQ99954 134 aa0.76□□□□□ -2.29
SOX2-OT-207ENST00000476964 BDP1A6H8Y1 2624 aa0.76□□□□□ -2.29
SOX2-OT-207ENST00000476964 CREBBPQ92793 2442 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 KRTAP2-3P0C7H8 128 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 SPART-AS1P0CW21 52 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 APELAP0DMC3 54 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 KRTAP2-4Q9BYR9 128 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 PRRC2CQ9Y520 2896 aaKnown RBP0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 A0A0C4DFX4 3053 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 CHD9Q3L8U1 2897 aa0.75□□□□□ -2.29
SOX2-OT-207ENST00000476964 PKD1L2Q7Z442 2459 aa0.74□□□□□ -2.29
SOX2-OT-207ENST00000476964 EP300Q09472 2414 aaPredicted RBP0.74□□□□□ -2.29
SOX2-OT-207ENST00000476964 CELSR2Q9HCU4 2923 aa0.74□□□□□ -2.29
SOX2-OT-207ENST00000476964 U3KQA8 63 aa0.74□□□□□ -2.29
SOX2-OT-207ENST00000476964 WNK1Q9H4A3 2382 aa0.74□□□□□ -2.29
SOX2-OT-207ENST00000476964 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
SOX2-OT-207ENST00000476964 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
SOX2-OT-207ENST00000476964 AKAP13Q12802 2813 aa0.73□□□□□ -2.29
SOX2-OT-207ENST00000476964 NCOR1O75376 2440 aa0.72□□□□□ -2.29
SOX2-OT-207ENST00000476964 SPTA1P02549 2419 aa0.72□□□□□ -2.29
SOX2-OT-207ENST00000476964 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
SOX2-OT-207ENST00000476964 COL6A5A8TX70 2615 aa0.71□□□□□ -2.3
SOX2-OT-207ENST00000476964 A0A096LNI7 61 aa0.71□□□□□ -2.3
SOX2-OT-207ENST00000476964 HTN1P15515 57 aa0.71□□□□□ -2.3
SOX2-OT-207ENST00000476964 HECTD1Q9ULT8 2610 aa0.71□□□□□ -2.3
SOX2-OT-207ENST00000476964 ACACAQ13085 2346 aa0.7□□□□□ -2.3
SOX2-OT-207ENST00000476964 RHPN1-AS1Q9BWJ2 59 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms