RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 NBPF19A0A087WUL8 3843 aa2.88□□□□□ -1.95
CCNL1-215ENST00000474539 UQCR11O14957 56 aa2.88□□□□□ -1.95
CCNL1-215ENST00000474539 PRR26Q8N8Z3 221 aa2.88□□□□□ -1.95
CCNL1-215ENST00000474539 C9orf92A6NGG3 77 aa2.88□□□□□ -1.95
CCNL1-215ENST00000474539 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
CCNL1-215ENST00000474539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.87□□□□□ -1.95
CCNL1-215ENST00000474539 ZCCHC13Q8WW36 166 aaKnown RBP2.87□□□□□ -1.95
CCNL1-215ENST00000474539 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
CCNL1-215ENST00000474539 TLN2Q9Y4G6 2542 aa2.86□□□□□ -1.95
CCNL1-215ENST00000474539 Q8N1X5 172 aa2.86□□□□□ -1.95
CCNL1-215ENST00000474539 ASB16-AS1Q495Z4 193 aa2.86□□□□□ -1.95
CCNL1-215ENST00000474539 ZZEF1O43149 2961 aa2.85□□□□□ -1.95
CCNL1-215ENST00000474539 NBEAQ8NFP9 2946 aa2.85□□□□□ -1.95
CCNL1-215ENST00000474539 A0A087WVE0 104 aa2.85□□□□□ -1.95
CCNL1-215ENST00000474539 CCDC179H3BU77 68 aa2.85□□□□□ -1.95
CCNL1-215ENST00000474539 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
CCNL1-215ENST00000474539 LINC01600Q96MT4 127 aa2.85□□□□□ -1.95
CCNL1-215ENST00000474539 KRTAP10-1P60331 282 aa2.84□□□□□ -1.96
CCNL1-215ENST00000474539 CRIPTQ9P021 101 aa2.84□□□□□ -1.96
CCNL1-215ENST00000474539 Q5XG85 94 aa2.83□□□□□ -1.96
CCNL1-215ENST00000474539 KRTAP17-1Q9BYP8 105 aa2.83□□□□□ -1.96
CCNL1-215ENST00000474539 ATMQ13315 3056 aa2.83□□□□□ -1.96
CCNL1-215ENST00000474539 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
CCNL1-215ENST00000474539 A0A1W2PNM2 257 aa2.82□□□□□ -1.96
CCNL1-215ENST00000474539 S4R3F8 94 aa2.82□□□□□ -1.96
CCNL1-215ENST00000474539 HELZ2Q9BYK8 2649 aaKnown RBP2.82□□□□□ -1.96
CCNL1-215ENST00000474539 COA5Q86WW8 74 aa2.82□□□□□ -1.96
CCNL1-215ENST00000474539 MGAQ8IWI9 3026 aa2.82□□□□□ -1.96
CCNL1-215ENST00000474539 KLKP1Q107X0 134 aa2.81□□□□□ -1.96
CCNL1-215ENST00000474539 KRTAP26-1Q6PEX3 210 aa2.81□□□□□ -1.96
CCNL1-215ENST00000474539 BOD1L1Q8NFC6 3051 aa2.8□□□□□ -1.96
CCNL1-215ENST00000474539 PMAIP1Q13794 54 aa2.8□□□□□ -1.96
CCNL1-215ENST00000474539 ACANP16112 2415 aa2.79□□□□□ -1.96
CCNL1-215ENST00000474539 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
CCNL1-215ENST00000474539 DMAC1Q96GE9 116 aa2.78□□□□□ -1.96
CCNL1-215ENST00000474539 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
CCNL1-215ENST00000474539 SMCPP49901 116 aaPredicted RBP2.78□□□□□ -1.96
CCNL1-215ENST00000474539 KRTAP10-2P60368 255 aa2.78□□□□□ -1.96
CCNL1-215ENST00000474539 MIR22HGQ0VDD5 57 aa2.78□□□□□ -1.96
CCNL1-215ENST00000474539 SVEP1Q4LDE5 3571 aa2.78□□□□□ -1.96
CCNL1-215ENST00000474539 ANAPC11Q9NYG5 84 aa2.78□□□□□ -1.96
CCNL1-215ENST00000474539 Q6ZRN7 208 aaPredicted RBP2.77□□□□□ -1.97
CCNL1-215ENST00000474539 FLNBO75369 2602 aaKnown RBP2.77□□□□□ -1.97
CCNL1-215ENST00000474539 KRTAP1-5Q9BYS1 174 aa2.77□□□□□ -1.97
CCNL1-215ENST00000474539 HECTD1Q9ULT8 2610 aa2.77□□□□□ -1.97
CCNL1-215ENST00000474539 CUBNO60494 3623 aa2.76□□□□□ -1.97
CCNL1-215ENST00000474539 Q75L30 129 aa2.76□□□□□ -1.97
CCNL1-215ENST00000474539 POLQO75417 2590 aa2.76□□□□□ -1.97
CCNL1-215ENST00000474539 DMXL2Q8TDJ6 3036 aa2.76□□□□□ -1.97
CCNL1-215ENST00000474539 ZNF469Q96JG9 3925 aaPredicted RBP2.76□□□□□ -1.97
CCNL1-215ENST00000474539 PLAC4Q8WY50 150 aa2.76□□□□□ -1.97
CCNL1-215ENST00000474539 SPINK7P58062 85 aa2.76□□□□□ -1.97
CCNL1-215ENST00000474539 LINC00472Q9H8W2 130 aa2.75□□□□□ -1.97
CCNL1-215ENST00000474539 MMP24-AS1A0A0U1RRL7 71 aa2.75□□□□□ -1.97
CCNL1-215ENST00000474539 PSPHP1O15172 72 aa2.75□□□□□ -1.97
CCNL1-215ENST00000474539 R4GN34 69 aa2.74□□□□□ -1.97
CCNL1-215ENST00000474539 KMT2BQ9UMN6 2715 aaPredicted RBP2.74□□□□□ -1.97
CCNL1-215ENST00000474539 H7BZZ5 65 aa2.74□□□□□ -1.97
CCNL1-215ENST00000474539 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
CCNL1-215ENST00000474539 COL12A1Q99715 3063 aa2.73□□□□□ -1.97
CCNL1-215ENST00000474539 A0A1B0GU33 70 aa2.73□□□□□ -1.97
CCNL1-215ENST00000474539 KALRNO60229 2985 aa2.72□□□□□ -1.97
CCNL1-215ENST00000474539 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
CCNL1-215ENST00000474539 NOTCH2NLQ7Z3S9 236 aa2.72□□□□□ -1.97
CCNL1-215ENST00000474539 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
CCNL1-215ENST00000474539 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
CCNL1-215ENST00000474539 FLNAP21333 2647 aaKnown RBP2.71□□□□□ -1.97
CCNL1-215ENST00000474539 Q5W150 140 aa2.71□□□□□ -1.98
CCNL1-215ENST00000474539 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
CCNL1-215ENST00000474539 KRTAP4-16G5E9R7 235 aaPredicted RBP2.71□□□□□ -1.98
CCNL1-215ENST00000474539 USP24Q9UPU5 2620 aa2.71□□□□□ -1.98
CCNL1-215ENST00000474539 KRTAP29-1A8MX34 341 aaPredicted RBP2.71□□□□□ -1.98
CCNL1-215ENST00000474539 OCR1Q9BZK8 76 aa2.7□□□□□ -1.98
CCNL1-215ENST00000474539 BAHCC1Q9P281 2608 aa2.7□□□□□ -1.98
CCNL1-215ENST00000474539 ITPR3Q14573 2671 aa2.7□□□□□ -1.98
CCNL1-215ENST00000474539 LINC01554Q52M75 96 aa2.7□□□□□ -1.98
CCNL1-215ENST00000474539 ITPR1Q14643 2758 aa2.7□□□□□ -1.98
CCNL1-215ENST00000474539 EIF4EBP3O60516 100 aaPredicted RBP2.69□□□□□ -1.98
CCNL1-215ENST00000474539 CRYBG3Q68DQ2 2970 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 M0QZ58 72 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 Q1T7F1 81 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 LCA10Q71F78 164 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 C4orf26Q17RF5 130 aa2.68□□□□□ -1.98
CCNL1-215ENST00000474539 SETD2Q9BYW2 2564 aaPredicted RBP2.67□□□□□ -1.98
CCNL1-215ENST00000474539 AKAP13Q12802 2813 aa2.67□□□□□ -1.98
CCNL1-215ENST00000474539 KRTAP13-1Q8IUC0 172 aa2.66□□□□□ -1.98
CCNL1-215ENST00000474539 LINC01558Q9Y6Z2 57 aa2.66□□□□□ -1.98
CCNL1-215ENST00000474539 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
CCNL1-215ENST00000474539 ZNF292O60281 2723 aa2.65□□□□□ -1.99
CCNL1-215ENST00000474539 PANO1I0J062 215 aa2.64□□□□□ -1.99
CCNL1-215ENST00000474539 Q8N9P0 234 aaPredicted RBP2.64□□□□□ -1.99
CCNL1-215ENST00000474539 A0A0G2JQZ4 141 aa2.64□□□□□ -1.99
CCNL1-215ENST00000474539 MAST4O15021 2626 aa2.64□□□□□ -1.99
CCNL1-215ENST00000474539 UNC79Q9P2D8 2635 aa2.64□□□□□ -1.99
CCNL1-215ENST00000474539 DSPP15924 2871 aaKnown RBP2.63□□□□□ -1.99
CCNL1-215ENST00000474539 A0A087X002 238 aa2.63□□□□□ -1.99
CCNL1-215ENST00000474539 A8MUU9 505 aa2.63□□□□□ -1.99
CCNL1-215ENST00000474539 C20orf166-AS1Q96NR2 134 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms