RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ASH1LQ9NR48 2969 aaKnown RBP1.43□□□□□ -2.18
PRPF40A-206ENST00000471167 ALMS1Q8TCU4 4167 aa1.43□□□□□ -2.18
PRPF40A-206ENST00000471167 CLTCL1P53675 1640 aa1.42□□□□□ -2.18
PRPF40A-206ENST00000471167 KAAG1Q9UBP8 84 aa1.41□□□□□ -2.18
PRPF40A-206ENST00000471167 SPTBN2O15020 2390 aa1.4□□□□□ -2.19
PRPF40A-206ENST00000471167 PKDREJQ9NTG1 2253 aa1.4□□□□□ -2.19
PRPF40A-206ENST00000471167 CACNA1HO95180 2353 aa1.39□□□□□ -2.19
PRPF40A-206ENST00000471167 ZNF462Q96JM2 2506 aa1.38□□□□□ -2.19
PRPF40A-206ENST00000471167 H3BUA1 57 aa1.38□□□□□ -2.19
PRPF40A-206ENST00000471167 IGLV5-48A0A075B6I7 105 aa1.36□□□□□ -2.19
PRPF40A-206ENST00000471167 SPTBN1Q01082 2364 aaKnown RBP1.36□□□□□ -2.19
PRPF40A-206ENST00000471167 PRLHP81277 87 aa1.35□□□□□ -2.19
PRPF40A-206ENST00000471167 S4R3F8 94 aa1.35□□□□□ -2.19
PRPF40A-206ENST00000471167 DEFB109BQ30KR1 87 aa1.34□□□□□ -2.19
PRPF40A-206ENST00000471167 KNL1Q8NG31 2342 aa1.33□□□□□ -2.2
PRPF40A-206ENST00000471167 DEFB131AP59861 70 aa1.33□□□□□ -2.2
PRPF40A-206ENST00000471167 DEFB106AQ8N104 65 aa1.33□□□□□ -2.2
PRPF40A-206ENST00000471167 TTC28Q96AY4 2481 aa1.32□□□□□ -2.2
PRPF40A-206ENST00000471167 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
PRPF40A-206ENST00000471167 PCNX1Q96RV3 2341 aa1.3□□□□□ -2.2
PRPF40A-206ENST00000471167 MEGF8Q7Z7M0 2845 aa1.29□□□□□ -2.2
PRPF40A-206ENST00000471167 POLR2KP53803 58 aaKnown RBP1.29□□□□□ -2.2
PRPF40A-206ENST00000471167 TPRP12270 2363 aaKnown RBP1.28□□□□□ -2.2
PRPF40A-206ENST00000471167 RPL39P62891 51 aaKnown RBP1.28□□□□□ -2.2
PRPF40A-206ENST00000471167 IGF2RP11717 2491 aa1.27□□□□□ -2.21
PRPF40A-206ENST00000471167 PDE4DIPQ5VU43 2346 aa1.27□□□□□ -2.21
PRPF40A-206ENST00000471167 ARHGAP5-AS1Q96IT6 56 aa1.26□□□□□ -2.21
PRPF40A-206ENST00000471167 GVINP1Q7Z2Y8 2422 aa1.26□□□□□ -2.21
PRPF40A-206ENST00000471167 REV3LO60673 3130 aa1.25□□□□□ -2.21
PRPF40A-206ENST00000471167 F8P00451 2351 aa1.25□□□□□ -2.21
PRPF40A-206ENST00000471167 ZNF292O60281 2723 aa1.25□□□□□ -2.21
PRPF40A-206ENST00000471167 ABCA2Q9BZC7 2435 aa1.24□□□□□ -2.21
PRPF40A-206ENST00000471167 RPL39LQ96EH5 51 aaKnown RBP1.24□□□□□ -2.21
PRPF40A-206ENST00000471167 NOP10Q9NPE3 64 aaKnown RBP1.24□□□□□ -2.21
PRPF40A-206ENST00000471167 ABCA12Q86UK0 2595 aa1.24□□□□□ -2.21
PRPF40A-206ENST00000471167 CSPG4Q6UVK1 2322 aa1.23□□□□□ -2.21
PRPF40A-206ENST00000471167 POLQO75417 2590 aa1.23□□□□□ -2.21
PRPF40A-206ENST00000471167 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
PRPF40A-206ENST00000471167 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
PRPF40A-206ENST00000471167 DSPP15924 2871 aaKnown RBP1.2□□□□□ -2.22
PRPF40A-206ENST00000471167 SPINK1P00995 79 aa1.19□□□□□ -2.22
PRPF40A-206ENST00000471167 SPINK6Q6UWN8 80 aa1.19□□□□□ -2.22
PRPF40A-206ENST00000471167 H0YGG7 62 aa1.18□□□□□ -2.22
PRPF40A-206ENST00000471167 LEAP2Q969E1 77 aa1.18□□□□□ -2.22
PRPF40A-206ENST00000471167 AKAP6Q13023 2319 aa1.17□□□□□ -2.22
PRPF40A-206ENST00000471167 DEFB135Q30KP9 77 aa1.17□□□□□ -2.22
PRPF40A-206ENST00000471167 CLPSL2Q6UWE3 100 aa1.17□□□□□ -2.22
PRPF40A-206ENST00000471167 TTTY10Q9BZA0 68 aa1.17□□□□□ -2.22
PRPF40A-206ENST00000471167 CELSR2Q9HCU4 2923 aa1.16□□□□□ -2.22
PRPF40A-206ENST00000471167 M0QY20 66 aa1.15□□□□□ -2.23
PRPF40A-206ENST00000471167 SMR3AQ99954 134 aa1.15□□□□□ -2.23
PRPF40A-206ENST00000471167 CHD9Q3L8U1 2897 aa1.14□□□□□ -2.23
PRPF40A-206ENST00000471167 M0R2T5 61 aa1.14□□□□□ -2.23
PRPF40A-206ENST00000471167 TRANK1O15050 2925 aa1.13□□□□□ -2.23
PRPF40A-206ENST00000471167 A8MTW9 85 aa1.12□□□□□ -2.23
PRPF40A-206ENST00000471167 TOMM7Q9P0U1 55 aa1.11□□□□□ -2.23
PRPF40A-206ENST00000471167 CSMD3Q7Z407 3707 aa1.1□□□□□ -2.23
PRPF40A-206ENST00000471167 LINC01590Q5TEZ4 76 aa1.1□□□□□ -2.23
PRPF40A-206ENST00000471167 TENM4Q6N022 2769 aa1.08□□□□□ -2.24
PRPF40A-206ENST00000471167 BDP1A6H8Y1 2624 aa1.07□□□□□ -2.24
PRPF40A-206ENST00000471167 H3BSH0 61 aa1.07□□□□□ -2.24
PRPF40A-206ENST00000471167 KRTAP2-3P0C7H8 128 aa1.07□□□□□ -2.24
PRPF40A-206ENST00000471167 KRTAP2-4Q9BYR9 128 aa1.07□□□□□ -2.24
PRPF40A-206ENST00000471167 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
PRPF40A-206ENST00000471167 U3KQA8 63 aa1.07□□□□□ -2.24
PRPF40A-206ENST00000471167 EP300Q09472 2414 aaPredicted RBP1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 CEP290O15078 2479 aa1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 PKD1L2Q7Z442 2459 aa1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 VWFP04275 2813 aa1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 SPTA1P02549 2419 aa1.06□□□□□ -2.24
PRPF40A-206ENST00000471167 NCOR1O75376 2440 aa1.05□□□□□ -2.24
PRPF40A-206ENST00000471167 PRCDQ00LT1 54 aa1.05□□□□□ -2.24
PRPF40A-206ENST00000471167 ATRQ13535 2644 aa1.05□□□□□ -2.24
PRPF40A-206ENST00000471167 PIEZO1Q92508 2521 aa1.05□□□□□ -2.24
PRPF40A-206ENST00000471167 CELSR1Q9NYQ6 3014 aa1.04□□□□□ -2.24
PRPF40A-206ENST00000471167 M0QZ58 72 aa1.04□□□□□ -2.24
PRPF40A-206ENST00000471167 FBN2P35556 2912 aa1.03□□□□□ -2.24
PRPF40A-206ENST00000471167 CHD6Q8TD26 2715 aa1.02□□□□□ -2.25
PRPF40A-206ENST00000471167 HECTD1Q9ULT8 2610 aa1.02□□□□□ -2.25
PRPF40A-206ENST00000471167 DEFB104AQ8WTQ1 72 aa1.01□□□□□ -2.25
PRPF40A-206ENST00000471167 AKAP13Q12802 2813 aa1.01□□□□□ -2.25
PRPF40A-206ENST00000471167 PRM1P04553 51 aa1□□□□□ -2.25
PRPF40A-206ENST00000471167 ANK2Q01484 3957 aa1□□□□□ -2.25
PRPF40A-206ENST00000471167 A0A0C4DFX4 3053 aa0.99□□□□□ -2.25
PRPF40A-206ENST00000471167 FRAS1Q86XX4 4008 aa0.99□□□□□ -2.25
PRPF40A-206ENST00000471167 BSNQ9UPA5 3926 aa0.98□□□□□ -2.25
PRPF40A-206ENST00000471167 CHD8Q9HCK8 2581 aa0.98□□□□□ -2.25
PRPF40A-206ENST00000471167 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
PRPF40A-206ENST00000471167 H3BNG1 76 aa0.97□□□□□ -2.25
PRPF40A-206ENST00000471167 TNP1P09430 55 aa0.96□□□□□ -2.26
PRPF40A-206ENST00000471167 TENM3Q9P273 2699 aa0.95□□□□□ -2.26
PRPF40A-206ENST00000471167 CREBBPQ92793 2442 aa0.95□□□□□ -2.26
PRPF40A-206ENST00000471167 TNRC18O15417 2968 aaPredicted RBP0.95□□□□□ -2.26
PRPF40A-206ENST00000471167 WNK1Q9H4A3 2382 aa0.94□□□□□ -2.26
PRPF40A-206ENST00000471167 TNXBP22105 4242 aa0.94□□□□□ -2.26
PRPF40A-206ENST00000471167 NBASA2RRP1 2371 aa0.94□□□□□ -2.26
PRPF40A-206ENST00000471167 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
PRPF40A-206ENST00000471167 K7EIM0 57 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms