RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SPTBN2O15020 2390 aa1.11□□□□□ -2.23
VPS8-215ENST00000460158 CACNA1HO95180 2353 aa1.1□□□□□ -2.23
VPS8-215ENST00000460158 H3BUA1 57 aa1.1□□□□□ -2.23
VPS8-215ENST00000460158 WT1-ASQ06250 92 aa1.1□□□□□ -2.23
VPS8-215ENST00000460158 PDE4DIPQ5VU43 2346 aa1.1□□□□□ -2.23
VPS8-215ENST00000460158 KAAG1Q9UBP8 84 aa1.09□□□□□ -2.23
VPS8-215ENST00000460158 SPTBN1Q01082 2364 aaKnown RBP1.08□□□□□ -2.24
VPS8-215ENST00000460158 TPRP12270 2363 aaKnown RBP1.07□□□□□ -2.24
VPS8-215ENST00000460158 IGF2RP11717 2491 aa1.07□□□□□ -2.24
VPS8-215ENST00000460158 CSPG4Q6UVK1 2322 aa1.06□□□□□ -2.24
VPS8-215ENST00000460158 KRTAP10-4P60372 401 aaPredicted RBP1.06□□□□□ -2.24
VPS8-215ENST00000460158 PRLHP81277 87 aa1.06□□□□□ -2.24
VPS8-215ENST00000460158 ZNF292O60281 2723 aa1.05□□□□□ -2.24
VPS8-215ENST00000460158 DEFB131AP59861 70 aa1.05□□□□□ -2.24
VPS8-215ENST00000460158 DEFB109BQ30KR1 87 aa1.05□□□□□ -2.24
VPS8-215ENST00000460158 PCNX1Q96RV3 2341 aa1.04□□□□□ -2.24
VPS8-215ENST00000460158 TTC28Q96AY4 2481 aa1.04□□□□□ -2.24
VPS8-215ENST00000460158 IGLV5-48A0A075B6I7 105 aa1.04□□□□□ -2.24
VPS8-215ENST00000460158 DEFB106AQ8N104 65 aa1.04□□□□□ -2.24
VPS8-215ENST00000460158 F8P00451 2351 aa1.04□□□□□ -2.24
VPS8-215ENST00000460158 S4R3F8 94 aa1.03□□□□□ -2.24
VPS8-215ENST00000460158 ABCA12Q86UK0 2595 aa1.02□□□□□ -2.25
VPS8-215ENST00000460158 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
VPS8-215ENST00000460158 FBN3Q75N90 2809 aa1.02□□□□□ -2.25
VPS8-215ENST00000460158 MEGF8Q7Z7M0 2845 aa1.02□□□□□ -2.25
VPS8-215ENST00000460158 GVINP1Q7Z2Y8 2422 aa1.01□□□□□ -2.25
VPS8-215ENST00000460158 MMP24-AS1A0A0U1RRL7 71 aa1.01□□□□□ -2.25
VPS8-215ENST00000460158 ABCA2Q9BZC7 2435 aa1.01□□□□□ -2.25
VPS8-215ENST00000460158 POLR2KP53803 58 aaKnown RBP1□□□□□ -2.25
VPS8-215ENST00000460158 RPL39P62891 51 aaKnown RBP1□□□□□ -2.25
VPS8-215ENST00000460158 ARHGAP5-AS1Q96IT6 56 aa1□□□□□ -2.25
VPS8-215ENST00000460158 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
VPS8-215ENST00000460158 POLQO75417 2590 aa1□□□□□ -2.25
VPS8-215ENST00000460158 FCGBPQ9Y6R7 5405 aaPredicted RBP0.98□□□□□ -2.25
VPS8-215ENST00000460158 TENM1Q9UKZ4 2725 aa0.97□□□□□ -2.25
VPS8-215ENST00000460158 CELSR2Q9HCU4 2923 aa0.97□□□□□ -2.25
VPS8-215ENST00000460158 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
VPS8-215ENST00000460158 H0YGG7 62 aa0.97□□□□□ -2.25
VPS8-215ENST00000460158 RPL39LQ96EH5 51 aaKnown RBP0.97□□□□□ -2.25
VPS8-215ENST00000460158 REV3LO60673 3130 aa0.97□□□□□ -2.25
VPS8-215ENST00000460158 DSPP15924 2871 aaKnown RBP0.96□□□□□ -2.26
VPS8-215ENST00000460158 CHD9Q3L8U1 2897 aa0.95□□□□□ -2.26
VPS8-215ENST00000460158 NCOR1O75376 2440 aa0.95□□□□□ -2.26
VPS8-215ENST00000460158 SPINK1P00995 79 aa0.94□□□□□ -2.26
VPS8-215ENST00000460158 SPINK6Q6UWN8 80 aa0.94□□□□□ -2.26
VPS8-215ENST00000460158 TTTY10Q9BZA0 68 aa0.94□□□□□ -2.26
VPS8-215ENST00000460158 TRANK1O15050 2925 aa0.93□□□□□ -2.26
VPS8-215ENST00000460158 CEP290O15078 2479 aa0.93□□□□□ -2.26
VPS8-215ENST00000460158 M0QY20 66 aa0.92□□□□□ -2.26
VPS8-215ENST00000460158 DEFB135Q30KP9 77 aa0.92□□□□□ -2.26
VPS8-215ENST00000460158 LEAP2Q969E1 77 aa0.92□□□□□ -2.26
VPS8-215ENST00000460158 PRRC2CQ9Y520 2896 aaKnown RBP0.92□□□□□ -2.26
VPS8-215ENST00000460158 A0A0C4DFX4 3053 aa0.91□□□□□ -2.26
VPS8-215ENST00000460158 SPTA1P02549 2419 aa0.91□□□□□ -2.26
VPS8-215ENST00000460158 A8MTW9 85 aa0.9□□□□□ -2.27
VPS8-215ENST00000460158 TOMM7Q9P0U1 55 aa0.9□□□□□ -2.27
VPS8-215ENST00000460158 VWFP04275 2813 aa0.89□□□□□ -2.27
VPS8-215ENST00000460158 CLPSL2Q6UWE3 100 aa0.89□□□□□ -2.27
VPS8-215ENST00000460158 M0R2T5 61 aa0.88□□□□□ -2.27
VPS8-215ENST00000460158 LINC01590Q5TEZ4 76 aa0.87□□□□□ -2.27
VPS8-215ENST00000460158 PKD1L2Q7Z442 2459 aa0.87□□□□□ -2.27
VPS8-215ENST00000460158 ATRQ13535 2644 aa0.86□□□□□ -2.27
VPS8-215ENST00000460158 H3BSH0 61 aa0.86□□□□□ -2.27
VPS8-215ENST00000460158 PRCDQ00LT1 54 aa0.86□□□□□ -2.27
VPS8-215ENST00000460158 CELSR1Q9NYQ6 3014 aa0.86□□□□□ -2.27
VPS8-215ENST00000460158 EP300Q09472 2414 aaPredicted RBP0.86□□□□□ -2.27
VPS8-215ENST00000460158 FBN2P35556 2912 aa0.85□□□□□ -2.27
VPS8-215ENST00000460158 NBASA2RRP1 2371 aa0.85□□□□□ -2.27
VPS8-215ENST00000460158 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
VPS8-215ENST00000460158 SRRM2Q9UQ35 2752 aaKnown RBP0.84□□□□□ -2.27
VPS8-215ENST00000460158 BDP1A6H8Y1 2624 aa0.84□□□□□ -2.27
VPS8-215ENST00000460158 COL6A5A8TX70 2615 aa0.84□□□□□ -2.27
VPS8-215ENST00000460158 SMR3AQ99954 134 aa0.84□□□□□ -2.27
VPS8-215ENST00000460158 U3KQA8 63 aa0.84□□□□□ -2.27
VPS8-215ENST00000460158 CSMD3Q7Z407 3707 aa0.84□□□□□ -2.28
VPS8-215ENST00000460158 PIEZO1Q92508 2521 aa0.84□□□□□ -2.28
VPS8-215ENST00000460158 CREBBPQ92793 2442 aa0.84□□□□□ -2.28
VPS8-215ENST00000460158 ACACAQ13085 2346 aa0.83□□□□□ -2.28
VPS8-215ENST00000460158 CHD6Q8TD26 2715 aa0.83□□□□□ -2.28
VPS8-215ENST00000460158 M0QZ58 72 aa0.83□□□□□ -2.28
VPS8-215ENST00000460158 AKAP13Q12802 2813 aa0.83□□□□□ -2.28
VPS8-215ENST00000460158 BSNQ9UPA5 3926 aa0.82□□□□□ -2.28
VPS8-215ENST00000460158 NAV2Q8IVL1 2488 aa0.81□□□□□ -2.28
VPS8-215ENST00000460158 C9orf92A6NGG3 77 aa0.8□□□□□ -2.28
VPS8-215ENST00000460158 CHD8Q9HCK8 2581 aa0.8□□□□□ -2.28
VPS8-215ENST00000460158 HECTD1Q9ULT8 2610 aa0.8□□□□□ -2.28
VPS8-215ENST00000460158 WNK1Q9H4A3 2382 aa0.79□□□□□ -2.28
VPS8-215ENST00000460158 DEFB104AQ8WTQ1 72 aa0.79□□□□□ -2.28
VPS8-215ENST00000460158 CCDC168Q8NDH2 2452 aa0.78□□□□□ -2.28
VPS8-215ENST00000460158 TNRC18O15417 2968 aaPredicted RBP0.78□□□□□ -2.28
VPS8-215ENST00000460158 TNP1P09430 55 aa0.78□□□□□ -2.28
VPS8-215ENST00000460158 UBR5O95071 2799 aaPredicted RBP0.78□□□□□ -2.29
VPS8-215ENST00000460158 FRAS1Q86XX4 4008 aa0.78□□□□□ -2.29
VPS8-215ENST00000460158 ANK2Q01484 3957 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 HIVEP3Q5T1R4 2406 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 OTOGQ6ZRI0 2925 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 CHD7Q9P2D1 2997 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 H3BNG1 76 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
VPS8-215ENST00000460158 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms