RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 LINC00472Q9H8W2 130 aa9.5□□□□□ -0.89
C9orf3-204ENST00000424143 TRRAPQ9Y4A5 3859 aa9.49□□□□□ -0.89
C9orf3-204ENST00000424143 HECTD1Q9ULT8 2610 aa9.49□□□□□ -0.89
C9orf3-204ENST00000424143 KRTAP24-1Q3LI83 254 aa9.48□□□□□ -0.89
C9orf3-204ENST00000424143 PRLHP81277 87 aa9.47□□□□□ -0.89
C9orf3-204ENST00000424143 CASC2Q6XLA1 102 aa9.47□□□□□ -0.89
C9orf3-204ENST00000424143 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
C9orf3-204ENST00000424143 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
C9orf3-204ENST00000424143 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.89
C9orf3-204ENST00000424143 C1orf195Q5TG92 126 aa9.45□□□□□ -0.9
C9orf3-204ENST00000424143 PKD1L1Q8TDX9 2849 aa9.44□□□□□ -0.9
C9orf3-204ENST00000424143 H0Y9P7 68 aa9.44□□□□□ -0.9
C9orf3-204ENST00000424143 LINC00208Q96KT6 92 aa9.44□□□□□ -0.9
C9orf3-204ENST00000424143 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
C9orf3-204ENST00000424143 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
C9orf3-204ENST00000424143 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
C9orf3-204ENST00000424143 CMYA5Q8N3K9 4069 aa9.41□□□□□ -0.9
C9orf3-204ENST00000424143 IGKV2-24A0A0C4DH68 120 aa9.4□□□□□ -0.9
C9orf3-204ENST00000424143 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
C9orf3-204ENST00000424143 ASB16-AS1Q495Z4 193 aa9.4□□□□□ -0.9
C9orf3-204ENST00000424143 LIMD2Q9BT23 127 aa9.4□□□□□ -0.9
C9orf3-204ENST00000424143 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
C9orf3-204ENST00000424143 KRTAP1-5Q9BYS1 174 aa9.38□□□□□ -0.91
C9orf3-204ENST00000424143 TP53AIP1Q9HCN2 124 aa9.38□□□□□ -0.91
C9orf3-204ENST00000424143 MMP24-AS1A0A0U1RRL7 71 aa9.37□□□□□ -0.91
C9orf3-204ENST00000424143 K7EIL1 84 aa9.37□□□□□ -0.91
C9orf3-204ENST00000424143 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
C9orf3-204ENST00000424143 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
C9orf3-204ENST00000424143 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
C9orf3-204ENST00000424143 KRTAP11-1Q8IUC1 163 aa9.35□□□□□ -0.91
C9orf3-204ENST00000424143 MOBPQ13875 183 aa9.34□□□□□ -0.91
C9orf3-204ENST00000424143 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-204ENST00000424143 ANK2Q01484 3957 aa9.33□□□□□ -0.92
C9orf3-204ENST00000424143 APLNQ9ULZ1 77 aa9.33□□□□□ -0.92
C9orf3-204ENST00000424143 PRR4Q16378 134 aa9.32□□□□□ -0.92
C9orf3-204ENST00000424143 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
C9orf3-204ENST00000424143 Q5VV11 94 aa9.31□□□□□ -0.92
C9orf3-204ENST00000424143 PSPHP1O15172 72 aa9.31□□□□□ -0.92
C9orf3-204ENST00000424143 Q6ZR54 194 aa9.31□□□□□ -0.92
C9orf3-204ENST00000424143 HUWE1Q7Z6Z7 4374 aaKnown RBP9.29□□□□□ -0.92
C9orf3-204ENST00000424143 LOC101927531A0A1B0GV80 90 aa9.29□□□□□ -0.92
C9orf3-204ENST00000424143 A8MUN3 132 aa9.29□□□□□ -0.92
C9orf3-204ENST00000424143 Q96NJ1 140 aa9.29□□□□□ -0.92
C9orf3-204ENST00000424143 CHTF8P0CG12 524 aa9.28□□□□□ -0.92
C9orf3-204ENST00000424143 UBE2DNLQ8IWF7 75 aa9.28□□□□□ -0.92
C9orf3-204ENST00000424143 FLNBO75369 2602 aaKnown RBP9.27□□□□□ -0.93
C9orf3-204ENST00000424143 MAST4O15021 2626 aa9.25□□□□□ -0.93
C9orf3-204ENST00000424143 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
C9orf3-204ENST00000424143 PMAIP1Q13794 54 aa9.24□□□□□ -0.93
C9orf3-204ENST00000424143 Q75L30 129 aa9.24□□□□□ -0.93
C9orf3-204ENST00000424143 C8orf17Q9NRJ1 99 aa9.24□□□□□ -0.93
C9orf3-204ENST00000424143 F8P00451 2351 aa9.24□□□□□ -0.93
C9orf3-204ENST00000424143 COA5Q86WW8 74 aa9.23□□□□□ -0.93
C9orf3-204ENST00000424143 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
C9orf3-204ENST00000424143 DYNC2H1Q8NCM8 4307 aaKnown RBP9.21□□□□□ -0.93
C9orf3-204ENST00000424143 NBDYA0A0U1RRE5 68 aa9.21□□□□□ -0.93
C9orf3-204ENST00000424143 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.93
C9orf3-204ENST00000424143 A0A1B0GVX0 72 aa9.2□□□□□ -0.94
C9orf3-204ENST00000424143 PRB2P02812 416 aaPredicted RBP9.2□□□□□ -0.94
C9orf3-204ENST00000424143 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
C9orf3-204ENST00000424143 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
C9orf3-204ENST00000424143 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
C9orf3-204ENST00000424143 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
C9orf3-204ENST00000424143 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
C9orf3-204ENST00000424143 CD164Q04900 197 aa9.16□□□□□ -0.94
C9orf3-204ENST00000424143 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
C9orf3-204ENST00000424143 PANO1I0J062 215 aa9.15□□□□□ -0.94
C9orf3-204ENST00000424143 ATP11AUNQ6ZP68 121 aa9.15□□□□□ -0.94
C9orf3-204ENST00000424143 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.94
C9orf3-204ENST00000424143 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
C9orf3-204ENST00000424143 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
C9orf3-204ENST00000424143 SEC61GP60059 68 aa9.13□□□□□ -0.95
C9orf3-204ENST00000424143 BAHCC1Q9P281 2608 aa9.12□□□□□ -0.95
C9orf3-204ENST00000424143 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
C9orf3-204ENST00000424143 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
C9orf3-204ENST00000424143 DNAH10Q8IVF4 4471 aa9.11□□□□□ -0.95
C9orf3-204ENST00000424143 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
C9orf3-204ENST00000424143 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
C9orf3-204ENST00000424143 FBN1P35555 2871 aaKnown RBP9.09□□□□□ -0.95
C9orf3-204ENST00000424143 ZNF861PO60384 105 aa9.09□□□□□ -0.95
C9orf3-204ENST00000424143 CDC42SE1Q9NRR8 79 aa9.09□□□□□ -0.95
C9orf3-204ENST00000424143 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
C9orf3-204ENST00000424143 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
C9orf3-204ENST00000424143 PCOTHQ58A44 107 aa9.07□□□□□ -0.96
C9orf3-204ENST00000424143 LCA10Q71F78 164 aa9.06□□□□□ -0.96
C9orf3-204ENST00000424143 NBEAL1Q6ZS30 2694 aa9.06□□□□□ -0.96
C9orf3-204ENST00000424143 A0A087WTM6 91 aa9.05□□□□□ -0.96
C9orf3-204ENST00000424143 HRES1P13985 223 aa9.05□□□□□ -0.96
C9orf3-204ENST00000424143 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
C9orf3-204ENST00000424143 MDFIQ99750 246 aa9.05□□□□□ -0.96
C9orf3-204ENST00000424143 PSORS1C2Q9UIG4 136 aa9.05□□□□□ -0.96
C9orf3-204ENST00000424143 A6NED7 52 aa9.04□□□□□ -0.96
C9orf3-204ENST00000424143 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
C9orf3-204ENST00000424143 NDUFS5O43920 106 aa9.02□□□□□ -0.96
C9orf3-204ENST00000424143 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
C9orf3-204ENST00000424143 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
C9orf3-204ENST00000424143 A8MU10 97 aa9□□□□□ -0.97
C9orf3-204ENST00000424143 LYSTQ99698 3801 aa8.99□□□□□ -0.97
C9orf3-204ENST00000424143 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
C9orf3-204ENST00000424143 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms