RNA–Protein interactions for RNA: ENST00000415910.2

LINC01661-201, Transcript of long intergenic non-protein coding RNA 1661, humanhuman

TSL 3 BASIC

Gene LINC01661, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01661-201ENST00000415910 PKDREJQ9NTG1 2253 aa1.7□□□□□ -2.14
LINC01661-201ENST00000415910 MEGF8Q7Z7M0 2845 aa1.7□□□□□ -2.14
LINC01661-201ENST00000415910 H3BUA1 57 aa1.69□□□□□ -2.14
LINC01661-201ENST00000415910 REV3LO60673 3130 aa1.69□□□□□ -2.14
LINC01661-201ENST00000415910 S4R3F8 94 aa1.68□□□□□ -2.14
LINC01661-201ENST00000415910 SPTBN1Q01082 2364 aaKnown RBP1.67□□□□□ -2.14
LINC01661-201ENST00000415910 MUC6Q6W4X9 2439 aa1.66□□□□□ -2.14
LINC01661-201ENST00000415910 TTC28Q96AY4 2481 aa1.64□□□□□ -2.15
LINC01661-201ENST00000415910 MMP24-AS1A0A0U1RRL7 71 aa1.64□□□□□ -2.15
LINC01661-201ENST00000415910 DEFB131AP59861 70 aa1.64□□□□□ -2.15
LINC01661-201ENST00000415910 KNL1Q8NG31 2342 aa1.64□□□□□ -2.15
LINC01661-201ENST00000415910 PCNX1Q96RV3 2341 aa1.64□□□□□ -2.15
LINC01661-201ENST00000415910 POLR2KP53803 58 aaKnown RBP1.63□□□□□ -2.15
LINC01661-201ENST00000415910 PRLHP81277 87 aa1.63□□□□□ -2.15
LINC01661-201ENST00000415910 IGF2RP11717 2491 aa1.63□□□□□ -2.15
LINC01661-201ENST00000415910 DEFB109BQ30KR1 87 aa1.62□□□□□ -2.15
LINC01661-201ENST00000415910 ZNF292O60281 2723 aa1.6□□□□□ -2.15
LINC01661-201ENST00000415910 DEFB106AQ8N104 65 aa1.6□□□□□ -2.15
LINC01661-201ENST00000415910 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
LINC01661-201ENST00000415910 GVINP1Q7Z2Y8 2422 aa1.59□□□□□ -2.16
LINC01661-201ENST00000415910 DSPP15924 2871 aaKnown RBP1.59□□□□□ -2.16
LINC01661-201ENST00000415910 RPL39P62891 51 aaKnown RBP1.58□□□□□ -2.16
LINC01661-201ENST00000415910 POLQO75417 2590 aa1.58□□□□□ -2.16
LINC01661-201ENST00000415910 TPRP12270 2363 aaKnown RBP1.58□□□□□ -2.16
LINC01661-201ENST00000415910 PDE4DIPQ5VU43 2346 aa1.54□□□□□ -2.16
LINC01661-201ENST00000415910 ARHGAP5-AS1Q96IT6 56 aa1.54□□□□□ -2.16
LINC01661-201ENST00000415910 ABCA12Q86UK0 2595 aa1.54□□□□□ -2.16
LINC01661-201ENST00000415910 F8P00451 2351 aa1.54□□□□□ -2.16
LINC01661-201ENST00000415910 ABCA2Q9BZC7 2435 aa1.53□□□□□ -2.16
LINC01661-201ENST00000415910 CHD9Q3L8U1 2897 aa1.52□□□□□ -2.17
LINC01661-201ENST00000415910 HELZ2Q9BYK8 2649 aaKnown RBP1.52□□□□□ -2.17
LINC01661-201ENST00000415910 RPL39LQ96EH5 51 aaKnown RBP1.52□□□□□ -2.17
LINC01661-201ENST00000415910 CELSR2Q9HCU4 2923 aa1.51□□□□□ -2.17
LINC01661-201ENST00000415910 CSPG4Q6UVK1 2322 aa1.51□□□□□ -2.17
LINC01661-201ENST00000415910 TRANK1O15050 2925 aa1.5□□□□□ -2.17
LINC01661-201ENST00000415910 NOP10Q9NPE3 64 aaKnown RBP1.5□□□□□ -2.17
LINC01661-201ENST00000415910 SMR3AQ99954 134 aa1.47□□□□□ -2.17
LINC01661-201ENST00000415910 CSMD3Q7Z407 3707 aa1.46□□□□□ -2.17
LINC01661-201ENST00000415910 CLPSL2Q6UWE3 100 aa1.46□□□□□ -2.18
LINC01661-201ENST00000415910 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
LINC01661-201ENST00000415910 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
LINC01661-201ENST00000415910 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
LINC01661-201ENST00000415910 AKAP6Q13023 2319 aa1.44□□□□□ -2.18
LINC01661-201ENST00000415910 TENM4Q6N022 2769 aa1.43□□□□□ -2.18
LINC01661-201ENST00000415910 LEAP2Q969E1 77 aa1.43□□□□□ -2.18
LINC01661-201ENST00000415910 SPINK1P00995 79 aa1.42□□□□□ -2.18
LINC01661-201ENST00000415910 DEFB135Q30KP9 77 aa1.42□□□□□ -2.18
LINC01661-201ENST00000415910 ANK2Q01484 3957 aa1.4□□□□□ -2.19
LINC01661-201ENST00000415910 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
LINC01661-201ENST00000415910 VWFP04275 2813 aa1.39□□□□□ -2.19
LINC01661-201ENST00000415910 M0QY20 66 aa1.39□□□□□ -2.19
LINC01661-201ENST00000415910 TTTY10Q9BZA0 68 aa1.39□□□□□ -2.19
LINC01661-201ENST00000415910 BDP1A6H8Y1 2624 aa1.39□□□□□ -2.19
LINC01661-201ENST00000415910 SRCAPQ6ZRS2 3230 aa1.39□□□□□ -2.19
LINC01661-201ENST00000415910 PRRC2CQ9Y520 2896 aaKnown RBP1.38□□□□□ -2.19
LINC01661-201ENST00000415910 CACNA1AO00555 2505 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 A8MTW9 85 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 H0YGG7 62 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 M0R2T5 61 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 LINC01590Q5TEZ4 76 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
LINC01661-201ENST00000415910 CELSR1Q9NYQ6 3014 aa1.37□□□□□ -2.19
LINC01661-201ENST00000415910 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
LINC01661-201ENST00000415910 UNC79Q9P2D8 2635 aa1.37□□□□□ -2.19
LINC01661-201ENST00000415910 ATRQ13535 2644 aa1.36□□□□□ -2.19
LINC01661-201ENST00000415910 A0A0C4DFX4 3053 aa1.36□□□□□ -2.19
LINC01661-201ENST00000415910 TENM1Q9UKZ4 2725 aa1.35□□□□□ -2.19
LINC01661-201ENST00000415910 FBN2P35556 2912 aa1.35□□□□□ -2.19
LINC01661-201ENST00000415910 PKD1L2Q7Z442 2459 aa1.34□□□□□ -2.19
LINC01661-201ENST00000415910 PIEZO1Q92508 2521 aa1.34□□□□□ -2.19
LINC01661-201ENST00000415910 AKAP13Q12802 2813 aa1.34□□□□□ -2.19
LINC01661-201ENST00000415910 FRAS1Q86XX4 4008 aa1.34□□□□□ -2.19
LINC01661-201ENST00000415910 CHD6Q8TD26 2715 aa1.34□□□□□ -2.2
LINC01661-201ENST00000415910 EP300Q09472 2414 aaPredicted RBP1.33□□□□□ -2.2
LINC01661-201ENST00000415910 CEP290O15078 2479 aa1.31□□□□□ -2.2
LINC01661-201ENST00000415910 BSNQ9UPA5 3926 aa1.31□□□□□ -2.2
LINC01661-201ENST00000415910 GPR98Q8WXG9 6306 aa1.31□□□□□ -2.2
LINC01661-201ENST00000415910 PRKDCP78527 4128 aaKnown RBP1.31□□□□□ -2.2
LINC01661-201ENST00000415910 HECTD1Q9ULT8 2610 aa1.3□□□□□ -2.2
LINC01661-201ENST00000415910 TOMM7Q9P0U1 55 aa1.3□□□□□ -2.2
LINC01661-201ENST00000415910 SPTA1P02549 2419 aa1.3□□□□□ -2.2
LINC01661-201ENST00000415910 M0QZ58 72 aa1.29□□□□□ -2.2
LINC01661-201ENST00000415910 U3KQA8 63 aa1.29□□□□□ -2.2
LINC01661-201ENST00000415910 CEP350Q5VT06 3117 aa1.29□□□□□ -2.2
LINC01661-201ENST00000415910 PRCDQ00LT1 54 aa1.28□□□□□ -2.2
LINC01661-201ENST00000415910 TNXBP22105 4242 aa1.28□□□□□ -2.2
LINC01661-201ENST00000415910 NCOR1O75376 2440 aa1.27□□□□□ -2.21
LINC01661-201ENST00000415910 H3BSH0 61 aa1.26□□□□□ -2.21
LINC01661-201ENST00000415910 PRM1P04553 51 aa1.26□□□□□ -2.21
LINC01661-201ENST00000415910 OTOGQ6ZRI0 2925 aa1.26□□□□□ -2.21
LINC01661-201ENST00000415910 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
LINC01661-201ENST00000415910 ZNF469Q96JG9 3925 aaPredicted RBP1.26□□□□□ -2.21
LINC01661-201ENST00000415910 TNRC18O15417 2968 aaPredicted RBP1.25□□□□□ -2.21
LINC01661-201ENST00000415910 CHD8Q9HCK8 2581 aa1.22□□□□□ -2.21
LINC01661-201ENST00000415910 SRRM2Q9UQ35 2752 aaKnown RBP1.22□□□□□ -2.21
LINC01661-201ENST00000415910 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
LINC01661-201ENST00000415910 DEFB104AQ8WTQ1 72 aa1.2□□□□□ -2.22
LINC01661-201ENST00000415910 APCP25054 2843 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms