RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
PCNX4-202ENST00000391611 SMG1Q96Q15 3661 aaKnown RBP8.37□□□□□ -1.07
PCNX4-202ENST00000391611 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
PCNX4-202ENST00000391611 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
PCNX4-202ENST00000391611 NBDYA0A0U1RRE5 68 aa8.37□□□□□ -1.07
PCNX4-202ENST00000391611 K7EIL1 84 aa8.36□□□□□ -1.07
PCNX4-202ENST00000391611 APCP25054 2843 aa8.36□□□□□ -1.07
PCNX4-202ENST00000391611 A8MWP4 228 aa8.35□□□□□ -1.07
PCNX4-202ENST00000391611 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
PCNX4-202ENST00000391611 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.08
PCNX4-202ENST00000391611 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.08
PCNX4-202ENST00000391611 PRR15Q8IV56 129 aa8.33□□□□□ -1.08
PCNX4-202ENST00000391611 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
PCNX4-202ENST00000391611 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.08
PCNX4-202ENST00000391611 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
PCNX4-202ENST00000391611 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
PCNX4-202ENST00000391611 RTL8CO15255 209 aa8.3□□□□□ -1.08
PCNX4-202ENST00000391611 H3BPC8 53 aa8.29□□□□□ -1.08
PCNX4-202ENST00000391611 MXRA5Q9NR99 2828 aa8.28□□□□□ -1.08
PCNX4-202ENST00000391611 COA5Q86WW8 74 aa8.28□□□□□ -1.08
PCNX4-202ENST00000391611 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
PCNX4-202ENST00000391611 DSCR10P59022 87 aa8.27□□□□□ -1.09
PCNX4-202ENST00000391611 SPENQ96T58 3664 aaKnown RBP8.27□□□□□ -1.09
PCNX4-202ENST00000391611 CSMD1Q96PZ7 3565 aa8.26□□□□□ -1.09
PCNX4-202ENST00000391611 C9orf163Q8N9P6 203 aa8.26□□□□□ -1.09
PCNX4-202ENST00000391611 IGLV8-61A0A075B6I0 122 aa8.24□□□□□ -1.09
PCNX4-202ENST00000391611 MRPL34Q9BQ48 92 aaKnown RBP8.24□□□□□ -1.09
PCNX4-202ENST00000391611 A0A1B0GU69 56 aa8.24□□□□□ -1.09
PCNX4-202ENST00000391611 OXTP01178 125 aa8.24□□□□□ -1.09
PCNX4-202ENST00000391611 ACYP2P14621 99 aa8.24□□□□□ -1.09
PCNX4-202ENST00000391611 K7ERS5 55 aa8.23□□□□□ -1.09
PCNX4-202ENST00000391611 CELSR1Q9NYQ6 3014 aa8.23□□□□□ -1.09
PCNX4-202ENST00000391611 C8orf17Q9NRJ1 99 aa8.23□□□□□ -1.09
PCNX4-202ENST00000391611 SVEP1Q4LDE5 3571 aa8.23□□□□□ -1.09
PCNX4-202ENST00000391611 Q5XG85 94 aa8.22□□□□□ -1.09
PCNX4-202ENST00000391611 LINC00313P59037 77 aa8.21□□□□□ -1.09
PCNX4-202ENST00000391611 KMT2BQ9UMN6 2715 aaPredicted RBP8.21□□□□□ -1.1
PCNX4-202ENST00000391611 C7orf65Q6ZTY9 151 aa8.2□□□□□ -1.1
PCNX4-202ENST00000391611 FAM229BQ4G0N7 80 aa8.19□□□□□ -1.1
PCNX4-202ENST00000391611 FP248Q71RG6 208 aaPredicted RBP8.19□□□□□ -1.1
PCNX4-202ENST00000391611 SPRR4Q96PI1 79 aa8.18□□□□□ -1.1
PCNX4-202ENST00000391611 CUBNO60494 3623 aa8.17□□□□□ -1.1
PCNX4-202ENST00000391611 IGLV5-37A0A075B6J1 123 aa8.17□□□□□ -1.1
PCNX4-202ENST00000391611 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
PCNX4-202ENST00000391611 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
PCNX4-202ENST00000391611 ZNF861PO60384 105 aa8.15□□□□□ -1.1
PCNX4-202ENST00000391611 CNBPP62633 177 aaKnown RBP8.15□□□□□ -1.1
PCNX4-202ENST00000391611 A0A087WTM6 91 aa8.15□□□□□ -1.11
PCNX4-202ENST00000391611 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.11
PCNX4-202ENST00000391611 KRTAP26-1Q6PEX3 210 aa8.14□□□□□ -1.11
PCNX4-202ENST00000391611 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
PCNX4-202ENST00000391611 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
PCNX4-202ENST00000391611 SPRR1AP35321 89 aa8.11□□□□□ -1.11
PCNX4-202ENST00000391611 TYMSOSQ8TAI1 123 aa8.11□□□□□ -1.11
PCNX4-202ENST00000391611 Q96NJ1 140 aa8.11□□□□□ -1.11
PCNX4-202ENST00000391611 PRR26Q8N8Z3 221 aa8.1□□□□□ -1.11
PCNX4-202ENST00000391611 CYP4F30PQ9H0H9 118 aa8.1□□□□□ -1.11
PCNX4-202ENST00000391611 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
PCNX4-202ENST00000391611 WIPF1O43516 503 aa8.09□□□□□ -1.11
PCNX4-202ENST00000391611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
PCNX4-202ENST00000391611 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
PCNX4-202ENST00000391611 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
PCNX4-202ENST00000391611 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
PCNX4-202ENST00000391611 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
PCNX4-202ENST00000391611 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
PCNX4-202ENST00000391611 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
PCNX4-202ENST00000391611 Q1T7F1 81 aa8.03□□□□□ -1.12
PCNX4-202ENST00000391611 IGLV7-43P04211 117 aa8.02□□□□□ -1.13
PCNX4-202ENST00000391611 TENM4Q6N022 2769 aa8□□□□□ -1.13
PCNX4-202ENST00000391611 MMP24-AS1A0A0U1RRL7 71 aa7.98□□□□□ -1.13
PCNX4-202ENST00000391611 TNP2Q05952 138 aa7.98□□□□□ -1.13
PCNX4-202ENST00000391611 UQCR11O14957 56 aa7.98□□□□□ -1.13
PCNX4-202ENST00000391611 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-202ENST00000391611 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
PCNX4-202ENST00000391611 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
PCNX4-202ENST00000391611 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
PCNX4-202ENST00000391611 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.14
PCNX4-202ENST00000391611 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
PCNX4-202ENST00000391611 C9orf92A6NGG3 77 aa7.94□□□□□ -1.14
PCNX4-202ENST00000391611 MIR22HGQ0VDD5 57 aa7.93□□□□□ -1.14
PCNX4-202ENST00000391611 Q8N1X5 172 aa7.93□□□□□ -1.14
PCNX4-202ENST00000391611 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
PCNX4-202ENST00000391611 CD164Q04900 197 aa7.91□□□□□ -1.14
PCNX4-202ENST00000391611 PANO1I0J062 215 aa7.9□□□□□ -1.14
PCNX4-202ENST00000391611 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
PCNX4-202ENST00000391611 TENM3Q9P273 2699 aa7.9□□□□□ -1.14
PCNX4-202ENST00000391611 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.15
PCNX4-202ENST00000391611 Q5VV11 94 aa7.88□□□□□ -1.15
PCNX4-202ENST00000391611 SPRR1BP22528 89 aa7.88□□□□□ -1.15
PCNX4-202ENST00000391611 HRES1P13985 223 aa7.88□□□□□ -1.15
PCNX4-202ENST00000391611 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
PCNX4-202ENST00000391611 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
PCNX4-202ENST00000391611 TENM1Q9UKZ4 2725 aa7.85□□□□□ -1.15
PCNX4-202ENST00000391611 KRTAP11-1Q8IUC1 163 aa7.85□□□□□ -1.15
PCNX4-202ENST00000391611 VWFP04275 2813 aa7.84□□□□□ -1.15
PCNX4-202ENST00000391611 PDZD2O15018 2839 aa7.84□□□□□ -1.15
PCNX4-202ENST00000391611 FBN1P35555 2871 aaKnown RBP7.82□□□□□ -1.16
PCNX4-202ENST00000391611 Q75L30 129 aa7.82□□□□□ -1.16
PCNX4-202ENST00000391611 KRTAP29-1A8MX34 341 aaPredicted RBP7.81□□□□□ -1.16
PCNX4-202ENST00000391611 SPINK7P58062 85 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms