RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
VRK3-202ENST00000377011 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
VRK3-202ENST00000377011 FAM19A5Q7Z5A7 132 aaPredicted RBP7.92□□□□□ -1.14
VRK3-202ENST00000377011 PLA2G2DQ9UNK4 145 aa7.92□□□□□ -1.14
VRK3-202ENST00000377011 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
VRK3-202ENST00000377011 KCNQ1DNQ9H478 68 aa7.89□□□□□ -1.15
VRK3-202ENST00000377011 Q6ZRP5 223 aa7.89□□□□□ -1.15
VRK3-202ENST00000377011 RMI2Q96E14 147 aa7.89□□□□□ -1.15
VRK3-202ENST00000377011 Q8N1X5 172 aa7.88□□□□□ -1.15
VRK3-202ENST00000377011 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
VRK3-202ENST00000377011 KLKP1Q107X0 134 aa7.87□□□□□ -1.15
VRK3-202ENST00000377011 C20orf197Q8N268 126 aa7.87□□□□□ -1.15
VRK3-202ENST00000377011 NKAPP1Q8N9T2 125 aa7.87□□□□□ -1.15
VRK3-202ENST00000377011 A0A1B0GW54 56 aa7.86□□□□□ -1.15
VRK3-202ENST00000377011 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
VRK3-202ENST00000377011 HERC1Q15751 4861 aa7.85□□□□□ -1.15
VRK3-202ENST00000377011 PANO1I0J062 215 aa7.85□□□□□ -1.15
VRK3-202ENST00000377011 PRYO14603 147 aa7.85□□□□□ -1.15
VRK3-202ENST00000377011 NDUFC1O43677 76 aa7.85□□□□□ -1.15
VRK3-202ENST00000377011 Q6ZSA8 131 aa7.85□□□□□ -1.15
VRK3-202ENST00000377011 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
VRK3-202ENST00000377011 FAM236DA0A1B0GTK5 79 aa7.84□□□□□ -1.15
VRK3-202ENST00000377011 FAM236CP0DP71 79 aa7.84□□□□□ -1.15
VRK3-202ENST00000377011 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
VRK3-202ENST00000377011 C7orf33Q8WU49 177 aa7.83□□□□□ -1.16
VRK3-202ENST00000377011 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
VRK3-202ENST00000377011 FLG2Q5D862 2391 aaPredicted RBP7.82□□□□□ -1.16
VRK3-202ENST00000377011 H7BZZ5 65 aa7.82□□□□□ -1.16
VRK3-202ENST00000377011 SERP1Q9Y6X1 66 aa7.82□□□□□ -1.16
VRK3-202ENST00000377011 IGLV5-48A0A075B6I7 105 aa7.81□□□□□ -1.16
VRK3-202ENST00000377011 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
VRK3-202ENST00000377011 SPRR1AP35321 89 aa7.81□□□□□ -1.16
VRK3-202ENST00000377011 ATP5EP56381 51 aaPredicted RBP7.81□□□□□ -1.16
VRK3-202ENST00000377011 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
VRK3-202ENST00000377011 Q5VSD8 79 aa7.81□□□□□ -1.16
VRK3-202ENST00000377011 SCXQ7RTU7 201 aa7.81□□□□□ -1.16
VRK3-202ENST00000377011 Q6ZRX8 168 aa7.8□□□□□ -1.16
VRK3-202ENST00000377011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.8□□□□□ -1.16
VRK3-202ENST00000377011 FAT3Q8TDW7 4589 aa7.79□□□□□ -1.16
VRK3-202ENST00000377011 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
VRK3-202ENST00000377011 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
VRK3-202ENST00000377011 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 OXTP01178 125 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 NREPQ16612 68 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 PKHD1L1Q86WI1 4243 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 Q8N377 158 aa7.78□□□□□ -1.16
VRK3-202ENST00000377011 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
VRK3-202ENST00000377011 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
VRK3-202ENST00000377011 ETDCA0A1B0GVM5 59 aa7.76□□□□□ -1.17
VRK3-202ENST00000377011 BPY2O14599 106 aa7.76□□□□□ -1.17
VRK3-202ENST00000377011 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
VRK3-202ENST00000377011 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
VRK3-202ENST00000377011 Q5XG85 94 aa7.75□□□□□ -1.17
VRK3-202ENST00000377011 IGKV4-1P06312 121 aa7.74□□□□□ -1.17
VRK3-202ENST00000377011 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
VRK3-202ENST00000377011 Q9BRP9 147 aa7.73□□□□□ -1.17
VRK3-202ENST00000377011 F8WEM9 126 aa7.72□□□□□ -1.17
VRK3-202ENST00000377011 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
VRK3-202ENST00000377011 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
VRK3-202ENST00000377011 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.18
VRK3-202ENST00000377011 TMEM254Q8TBM7 123 aa7.71□□□□□ -1.18
VRK3-202ENST00000377011 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
VRK3-202ENST00000377011 Q8NBF4 154 aa7.7□□□□□ -1.18
VRK3-202ENST00000377011 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
VRK3-202ENST00000377011 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
VRK3-202ENST00000377011 FAM168BA1KXE4 195 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 RPL37AP8A6NKH3 93 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 J3QL48 77 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 C4orf26Q17RF5 130 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 REG3GQ6UW15 175 aa7.69□□□□□ -1.18
VRK3-202ENST00000377011 A0A096LNI7 61 aa7.68□□□□□ -1.18
VRK3-202ENST00000377011 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
VRK3-202ENST00000377011 A0A1W2PNM2 257 aa7.68□□□□□ -1.18
VRK3-202ENST00000377011 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
VRK3-202ENST00000377011 DMBT1Q9UGM3 2413 aaPredicted RBP7.68□□□□□ -1.18
VRK3-202ENST00000377011 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
VRK3-202ENST00000377011 UBE2BP63146 152 aa7.66□□□□□ -1.18
VRK3-202ENST00000377011 HRCT1Q6UXD1 115 aa7.64□□□□□ -1.19
VRK3-202ENST00000377011 ST20-AS1Q8NBB2 130 aa7.64□□□□□ -1.19
VRK3-202ENST00000377011 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
VRK3-202ENST00000377011 Q8N9L7 120 aa7.64□□□□□ -1.19
VRK3-202ENST00000377011 IGLV8-61A0A075B6I0 122 aa7.63□□□□□ -1.19
VRK3-202ENST00000377011 SMIM29Q86T20 159 aa7.62□□□□□ -1.19
VRK3-202ENST00000377011 PLAC8Q9NZF1 115 aa7.62□□□□□ -1.19
VRK3-202ENST00000377011 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
VRK3-202ENST00000377011 PLA2G1BP04054 148 aaKnown RBP7.61□□□□□ -1.19
VRK3-202ENST00000377011 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
VRK3-202ENST00000377011 H0Y9J4 135 aa7.59□□□□□ -1.19
VRK3-202ENST00000377011 TNXBP22105 4242 aa7.58□□□□□ -1.2
VRK3-202ENST00000377011 DSCR10P59022 87 aa7.58□□□□□ -1.2
VRK3-202ENST00000377011 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
VRK3-202ENST00000377011 HMCN2Q8NDA2 5059 aa7.56□□□□□ -1.2
VRK3-202ENST00000377011 SPRR1BP22528 89 aa7.56□□□□□ -1.2
VRK3-202ENST00000377011 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
VRK3-202ENST00000377011 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
VRK3-202ENST00000377011 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms