RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 KRTAP26-1Q6PEX3 210 aa6.66□□□□□ -1.34
COL5A1-202ENST00000371820 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
COL5A1-202ENST00000371820 NDUFC1O43677 76 aa6.65□□□□□ -1.34
COL5A1-202ENST00000371820 Q6ZVQ6 151 aa6.65□□□□□ -1.34
COL5A1-202ENST00000371820 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
COL5A1-202ENST00000371820 KCNQ1DNQ9H478 68 aa6.65□□□□□ -1.34
COL5A1-202ENST00000371820 LINC01547P58512 204 aaPredicted RBP6.64□□□□□ -1.35
COL5A1-202ENST00000371820 SCXQ7RTU7 201 aa6.64□□□□□ -1.35
COL5A1-202ENST00000371820 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
COL5A1-202ENST00000371820 Q6ZRU5 148 aa6.63□□□□□ -1.35
COL5A1-202ENST00000371820 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
COL5A1-202ENST00000371820 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
COL5A1-202ENST00000371820 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
COL5A1-202ENST00000371820 PRYO14603 147 aa6.62□□□□□ -1.35
COL5A1-202ENST00000371820 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
COL5A1-202ENST00000371820 CNBPP62633 177 aaKnown RBP6.62□□□□□ -1.35
COL5A1-202ENST00000371820 C15orf56Q8N910 161 aa6.62□□□□□ -1.35
COL5A1-202ENST00000371820 Q8NDZ9 215 aa6.62□□□□□ -1.35
COL5A1-202ENST00000371820 A0A087WVE0 104 aa6.61□□□□□ -1.35
COL5A1-202ENST00000371820 HIGD2BQ4VC39 106 aa6.61□□□□□ -1.35
COL5A1-202ENST00000371820 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
COL5A1-202ENST00000371820 J3QL48 77 aa6.6□□□□□ -1.35
COL5A1-202ENST00000371820 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
COL5A1-202ENST00000371820 NREPQ16612 68 aa6.6□□□□□ -1.35
COL5A1-202ENST00000371820 PKIGQ9Y2B9 76 aa6.6□□□□□ -1.35
COL5A1-202ENST00000371820 FAM19A1Q7Z5A9 133 aa6.59□□□□□ -1.35
COL5A1-202ENST00000371820 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
COL5A1-202ENST00000371820 KRTAP29-1A8MX34 341 aaPredicted RBP6.58□□□□□ -1.36
COL5A1-202ENST00000371820 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
COL5A1-202ENST00000371820 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
COL5A1-202ENST00000371820 Q6ZRP5 223 aa6.57□□□□□ -1.36
COL5A1-202ENST00000371820 ETDCA0A1B0GVM5 59 aa6.56□□□□□ -1.36
COL5A1-202ENST00000371820 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
COL5A1-202ENST00000371820 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
COL5A1-202ENST00000371820 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
COL5A1-202ENST00000371820 IGLV1-50A0A075B6I6 118 aa6.54□□□□□ -1.36
COL5A1-202ENST00000371820 BPY2O14599 106 aa6.54□□□□□ -1.36
COL5A1-202ENST00000371820 SPRR1AP35321 89 aa6.54□□□□□ -1.36
COL5A1-202ENST00000371820 KRTAP10-4P60372 401 aaPredicted RBP6.54□□□□□ -1.36
COL5A1-202ENST00000371820 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
COL5A1-202ENST00000371820 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
COL5A1-202ENST00000371820 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
COL5A1-202ENST00000371820 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
COL5A1-202ENST00000371820 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
COL5A1-202ENST00000371820 Q6ZRX8 168 aa6.53□□□□□ -1.36
COL5A1-202ENST00000371820 LINC00474Q9P2X8 69 aa6.53□□□□□ -1.36
COL5A1-202ENST00000371820 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
COL5A1-202ENST00000371820 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
COL5A1-202ENST00000371820 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
COL5A1-202ENST00000371820 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
COL5A1-202ENST00000371820 Q8N377 158 aa6.51□□□□□ -1.37
COL5A1-202ENST00000371820 PKHD1L1Q86WI1 4243 aa6.51□□□□□ -1.37
COL5A1-202ENST00000371820 F8WEM9 126 aa6.5□□□□□ -1.37
COL5A1-202ENST00000371820 PANO1I0J062 215 aa6.5□□□□□ -1.37
COL5A1-202ENST00000371820 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
COL5A1-202ENST00000371820 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
COL5A1-202ENST00000371820 FAM19A5Q7Z5A7 132 aaPredicted RBP6.5□□□□□ -1.37
COL5A1-202ENST00000371820 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
COL5A1-202ENST00000371820 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
COL5A1-202ENST00000371820 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
COL5A1-202ENST00000371820 OXTP01178 125 aa6.49□□□□□ -1.37
COL5A1-202ENST00000371820 SERTAD4-AS1Q5TG53 156 aa6.49□□□□□ -1.37
COL5A1-202ENST00000371820 MRPL55Q7Z7F7 128 aaKnown RBP6.49□□□□□ -1.37
COL5A1-202ENST00000371820 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
COL5A1-202ENST00000371820 C1orf137Q5JT78 98 aa6.48□□□□□ -1.37
COL5A1-202ENST00000371820 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
COL5A1-202ENST00000371820 REG3GQ6UW15 175 aa6.47□□□□□ -1.37
COL5A1-202ENST00000371820 Q8NBF4 154 aa6.47□□□□□ -1.37
COL5A1-202ENST00000371820 A0A096LNI7 61 aa6.46□□□□□ -1.38
COL5A1-202ENST00000371820 H7BZZ5 65 aa6.46□□□□□ -1.38
COL5A1-202ENST00000371820 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
COL5A1-202ENST00000371820 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
COL5A1-202ENST00000371820 IGKV4-1P06312 121 aa6.45□□□□□ -1.38
COL5A1-202ENST00000371820 UBE2BP63146 152 aa6.45□□□□□ -1.38
COL5A1-202ENST00000371820 H0Y9J4 135 aa6.44□□□□□ -1.38
COL5A1-202ENST00000371820 TMEM254Q8TBM7 123 aa6.44□□□□□ -1.38
COL5A1-202ENST00000371820 IGLV8-61A0A075B6I0 122 aa6.42□□□□□ -1.38
COL5A1-202ENST00000371820 Q9BRP9 147 aa6.42□□□□□ -1.38
COL5A1-202ENST00000371820 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
COL5A1-202ENST00000371820 CYSTM1Q9H1C7 97 aa6.41□□□□□ -1.38
COL5A1-202ENST00000371820 A0A1W2PNM2 257 aa6.4□□□□□ -1.38
COL5A1-202ENST00000371820 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
COL5A1-202ENST00000371820 NDUFB1O75438 58 aa6.39□□□□□ -1.39
COL5A1-202ENST00000371820 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
COL5A1-202ENST00000371820 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
COL5A1-202ENST00000371820 H3BPC8 53 aa6.37□□□□□ -1.39
COL5A1-202ENST00000371820 SPRR1BP22528 89 aa6.37□□□□□ -1.39
COL5A1-202ENST00000371820 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
COL5A1-202ENST00000371820 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
COL5A1-202ENST00000371820 FAM168BA1KXE4 195 aa6.35□□□□□ -1.39
COL5A1-202ENST00000371820 SMIM29Q86T20 159 aa6.35□□□□□ -1.39
COL5A1-202ENST00000371820 UBE2AP49459 152 aa6.34□□□□□ -1.39
COL5A1-202ENST00000371820 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
COL5A1-202ENST00000371820 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
COL5A1-202ENST00000371820 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
COL5A1-202ENST00000371820 TNXBP22105 4242 aa6.33□□□□□ -1.4
COL5A1-202ENST00000371820 MP68P56378 58 aa6.32□□□□□ -1.4
COL5A1-202ENST00000371820 DSCR10P59022 87 aa6.32□□□□□ -1.4
COL5A1-202ENST00000371820 PHF5AQ7RTV0 110 aaKnown RBP6.32□□□□□ -1.4
COL5A1-202ENST00000371820 Q5XG85 94 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms