RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.24□□□□□ -2.05
MCF2-202ENST00000370573 LOC107984640A0A0U1RRK4 108 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 HIST1H4AP62805 103 aaKnown RBP2.24□□□□□ -2.05
MCF2-202ENST00000370573 RPL18AQ02543 176 aaKnown RBP2.24□□□□□ -2.05
MCF2-202ENST00000370573 MRPL55Q7Z7F7 128 aaKnown RBP2.24□□□□□ -2.05
MCF2-202ENST00000370573 KRTAP7-1Q8IUC3 87 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 IGLV8-61A0A075B6I0 122 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 IGKV2-28A0A075B6P5 120 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 A0A096LNI7 61 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 FAM168BA1KXE4 195 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 PANO1I0J062 215 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 BCE1O60756 84 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 IGKV2D-28P01615 120 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 CHTF8P0CG12 524 aa2.24□□□□□ -2.05
MCF2-202ENST00000370573 TCL1BO95988 128 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
MCF2-202ENST00000370573 Q5XG85 94 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 PRO1854Q9UHT4 67 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 SERP1Q9Y6X1 66 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 DYNC1H1Q14204 4646 aaKnown RBP2.23□□□□□ -2.05
MCF2-202ENST00000370573 IGKV2-24A0A0C4DH68 120 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 FAM236AA0A1B0GUQ0 79 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 FAM236BA0A1B0GV22 79 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 A0A1B0GVY2 172 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 COX6CP09669 75 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 C1orf195Q5TG92 126 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 LINC00337Q8N6G1 96 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 SERP2Q8N6R1 65 aa2.23□□□□□ -2.05
MCF2-202ENST00000370573 PKHD1P08F94 4074 aa2.22□□□□□ -2.05
MCF2-202ENST00000370573 SMIM26A0A096LP01 95 aa2.22□□□□□ -2.05
MCF2-202ENST00000370573 A0A1W2PNN7 141 aa2.22□□□□□ -2.05
MCF2-202ENST00000370573 NCR3O14931 201 aa2.22□□□□□ -2.05
MCF2-202ENST00000370573 KRTAP4-16G5E9R7 235 aaPredicted RBP2.22□□□□□ -2.05
MCF2-202ENST00000370573 KRTAP10-1P60331 282 aa2.22□□□□□ -2.05
MCF2-202ENST00000370573 LRP1BQ9NZR2 4599 aa2.21□□□□□ -2.05
MCF2-202ENST00000370573 INAFM2P0DMQ5 153 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 SPACA4Q8TDM5 124 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 C7orf33Q8WU49 177 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 C22orf24Q9Y442 160 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 H7C2G1 150 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 M0R378 163 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 IGLV6-57P01721 117 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 HRCT1Q6UXD1 115 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 KRTAP11-1Q8IUC1 163 aa2.21□□□□□ -2.06
MCF2-202ENST00000370573 TRAV13-2A0A0B4J235 113 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 TRBV10-3A0A0K0K1G6 114 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 NDUFC1O43677 76 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 CD164Q04900 197 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 ATP5EP2Q5VTU8 51 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 PHF5AQ7RTV0 110 aaKnown RBP2.2□□□□□ -2.06
MCF2-202ENST00000370573 LINC00167Q96N53 147 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 C4orf26Q17RF5 130 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 S100A7L2Q5SY68 101 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 SMIM11BQ8TCY0 68 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
MCF2-202ENST00000370573 IGLV1-50A0A075B6I6 118 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 Q6ZSA8 131 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 PLAC8Q9NZF1 115 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
MCF2-202ENST00000370573 SRRM2Q9UQ35 2752 aaKnown RBP2.19□□□□□ -2.06
MCF2-202ENST00000370573 TEX49A0A1B0GTD5 131 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
MCF2-202ENST00000370573 HAMPP81172 84 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 Q6JHZ5 121 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 CIRBP-AS1Q8TBR5 109 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 KCNQ1DNQ9H478 68 aa2.19□□□□□ -2.06
MCF2-202ENST00000370573 A0A0U1RQV1 116 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 FAM236DA0A1B0GTK5 79 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 hADV29S1A0JD25 119 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 FAM236CP0DP71 79 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 Q1RN00 199 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 SCXQ7RTU7 201 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 TRAV23DV6A0A075B6W5 121 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 TRBV7-6A0A0J9YX20 115 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 LST1O00453 97 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 PMAIP1Q13794 54 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 C6orf99Q4VX62 202 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 PRR15Q8IV56 129 aa2.18□□□□□ -2.06
MCF2-202ENST00000370573 H0Y9J4 135 aa2.17□□□□□ -2.06
MCF2-202ENST00000370573 ZNF73O43830 326 aaPredicted RBP2.17□□□□□ -2.06
MCF2-202ENST00000370573 SPRR1AP35321 89 aa2.17□□□□□ -2.06
MCF2-202ENST00000370573 CLEC2BQ92478 149 aa2.17□□□□□ -2.06
MCF2-202ENST00000370573 EPPK1P58107 5090 aaKnown RBP2.17□□□□□ -2.06
MCF2-202ENST00000370573 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
MCF2-202ENST00000370573 UBE2BP63146 152 aa2.17□□□□□ -2.06
MCF2-202ENST00000370573 KRTAP16-1A8MUX0 517 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 DIRC1Q969H9 104 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 FAT1Q14517 4588 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 H0YGX0 51 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 COX7BP24311 80 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 ELOF1P60002 83 aaKnown RBP2.16□□□□□ -2.06
MCF2-202ENST00000370573 KLKP1Q107X0 134 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 LINC00575Q6W349 94 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 DSCR8Q96T75 97 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
MCF2-202ENST00000370573 ERC2-IT1O76042 136 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms