RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 FAT3Q8TDW7 4589 aa9.63□□□□□ -0.87
LMO4-201ENST00000370542 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
LMO4-201ENST00000370542 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
LMO4-201ENST00000370542 TRBV7-4A0A0J9YYF1 115 aa9.61□□□□□ -0.87
LMO4-201ENST00000370542 DIRC1Q969H9 104 aa9.61□□□□□ -0.87
LMO4-201ENST00000370542 A0A1B0GW54 56 aa9.6□□□□□ -0.87
LMO4-201ENST00000370542 CHCHD10Q8WYQ3 142 aaPredicted RBP9.6□□□□□ -0.87
LMO4-201ENST00000370542 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.59□□□□□ -0.87
LMO4-201ENST00000370542 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
LMO4-201ENST00000370542 F8WEM9 126 aa9.59□□□□□ -0.87
LMO4-201ENST00000370542 PLA2G1BP04054 148 aaKnown RBP9.59□□□□□ -0.87
LMO4-201ENST00000370542 KRTAP10-4P60372 401 aaPredicted RBP9.59□□□□□ -0.87
LMO4-201ENST00000370542 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
LMO4-201ENST00000370542 PKHD1L1Q86WI1 4243 aa9.58□□□□□ -0.88
LMO4-201ENST00000370542 COX7BP24311 80 aa9.57□□□□□ -0.88
LMO4-201ENST00000370542 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
LMO4-201ENST00000370542 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
LMO4-201ENST00000370542 REG3AQ06141 175 aa9.56□□□□□ -0.88
LMO4-201ENST00000370542 NREPQ16612 68 aa9.56□□□□□ -0.88
LMO4-201ENST00000370542 Q6ZQY7 126 aa9.56□□□□□ -0.88
LMO4-201ENST00000370542 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
LMO4-201ENST00000370542 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
LMO4-201ENST00000370542 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
LMO4-201ENST00000370542 C1orf43Q9BWL3 253 aa9.55□□□□□ -0.88
LMO4-201ENST00000370542 LCE2BO14633 110 aa9.54□□□□□ -0.88
LMO4-201ENST00000370542 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
LMO4-201ENST00000370542 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
LMO4-201ENST00000370542 LINC00269Q8N2A0 174 aa9.53□□□□□ -0.88
LMO4-201ENST00000370542 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
LMO4-201ENST00000370542 BPY2O14599 106 aa9.52□□□□□ -0.89
LMO4-201ENST00000370542 ANGP03950 147 aaKnown RBP9.52□□□□□ -0.89
LMO4-201ENST00000370542 ELOF1P60002 83 aaKnown RBP9.52□□□□□ -0.89
LMO4-201ENST00000370542 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
LMO4-201ENST00000370542 F8WDY8 70 aa9.51□□□□□ -0.89
LMO4-201ENST00000370542 ZNF73O43830 326 aaPredicted RBP9.5□□□□□ -0.89
LMO4-201ENST00000370542 FP248Q71RG6 208 aaPredicted RBP9.5□□□□□ -0.89
LMO4-201ENST00000370542 PRYO14603 147 aa9.49□□□□□ -0.89
LMO4-201ENST00000370542 C9orf163Q8N9P6 203 aa9.49□□□□□ -0.89
LMO4-201ENST00000370542 M0R378 163 aa9.48□□□□□ -0.89
LMO4-201ENST00000370542 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
LMO4-201ENST00000370542 A0A0U1RQV1 116 aa9.47□□□□□ -0.89
LMO4-201ENST00000370542 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
LMO4-201ENST00000370542 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.9
LMO4-201ENST00000370542 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
LMO4-201ENST00000370542 Q8NDZ9 215 aa9.44□□□□□ -0.9
LMO4-201ENST00000370542 KRTAP9-2Q9BYQ4 174 aa9.44□□□□□ -0.9
LMO4-201ENST00000370542 OCR1Q9BZK8 76 aa9.44□□□□□ -0.9
LMO4-201ENST00000370542 IGKV4-1P06312 121 aa9.43□□□□□ -0.9
LMO4-201ENST00000370542 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
LMO4-201ENST00000370542 LRP2P98164 4655 aa9.43□□□□□ -0.9
LMO4-201ENST00000370542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
LMO4-201ENST00000370542 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
LMO4-201ENST00000370542 PANO1I0J062 215 aa9.41□□□□□ -0.9
LMO4-201ENST00000370542 C10orf25Q5T742 122 aa9.41□□□□□ -0.9
LMO4-201ENST00000370542 VPREB1P12018 145 aa9.39□□□□□ -0.91
LMO4-201ENST00000370542 RPL37AP61513 92 aaKnown RBP9.39□□□□□ -0.91
LMO4-201ENST00000370542 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
LMO4-201ENST00000370542 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
LMO4-201ENST00000370542 C1orf195Q5TG92 126 aa9.37□□□□□ -0.91
LMO4-201ENST00000370542 BRK1Q8WUW1 75 aa9.36□□□□□ -0.91
LMO4-201ENST00000370542 TNXBP22105 4242 aa9.35□□□□□ -0.91
LMO4-201ENST00000370542 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
LMO4-201ENST00000370542 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
LMO4-201ENST00000370542 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
LMO4-201ENST00000370542 CAMK2N2Q96S95 79 aa9.34□□□□□ -0.91
LMO4-201ENST00000370542 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
LMO4-201ENST00000370542 V9GYY9 64 aa9.34□□□□□ -0.91
LMO4-201ENST00000370542 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
LMO4-201ENST00000370542 Q1T7F1 81 aa9.32□□□□□ -0.92
LMO4-201ENST00000370542 NDUFB1O75438 58 aa9.31□□□□□ -0.92
LMO4-201ENST00000370542 MT1HL1P0DM35 61 aa9.31□□□□□ -0.92
LMO4-201ENST00000370542 Q6ZRU5 148 aa9.31□□□□□ -0.92
LMO4-201ENST00000370542 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
LMO4-201ENST00000370542 PLAC8Q9NZF1 115 aa9.31□□□□□ -0.92
LMO4-201ENST00000370542 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
LMO4-201ENST00000370542 PRR15Q8IV56 129 aa9.3□□□□□ -0.92
LMO4-201ENST00000370542 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
LMO4-201ENST00000370542 CYP4F30PQ9H0H9 118 aa9.29□□□□□ -0.92
LMO4-201ENST00000370542 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
LMO4-201ENST00000370542 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
LMO4-201ENST00000370542 CHTF8P0CG12 524 aa9.28□□□□□ -0.92
LMO4-201ENST00000370542 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
LMO4-201ENST00000370542 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
LMO4-201ENST00000370542 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
LMO4-201ENST00000370542 Q8NBF4 154 aa9.25□□□□□ -0.93
LMO4-201ENST00000370542 ZCCHC13Q8WW36 166 aaKnown RBP9.25□□□□□ -0.93
LMO4-201ENST00000370542 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
LMO4-201ENST00000370542 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
LMO4-201ENST00000370542 Q8N377 158 aa9.23□□□□□ -0.93
LMO4-201ENST00000370542 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
LMO4-201ENST00000370542 H3BPC8 53 aa9.22□□□□□ -0.93
LMO4-201ENST00000370542 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
LMO4-201ENST00000370542 SMIM29Q86T20 159 aa9.22□□□□□ -0.93
LMO4-201ENST00000370542 Q8N9L7 120 aa9.21□□□□□ -0.94
LMO4-201ENST00000370542 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
LMO4-201ENST00000370542 C1orf137Q5JT78 98 aa9.2□□□□□ -0.94
LMO4-201ENST00000370542 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
LMO4-201ENST00000370542 A0A096LNI7 61 aa9.19□□□□□ -0.94
LMO4-201ENST00000370542 Q6ZRX8 168 aa9.19□□□□□ -0.94
LMO4-201ENST00000370542 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms