RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ITPR1Q14643 2758 aa2.43□□□□□ -2.02
SYNE2-202ENST00000344113 RPL37P61927 97 aaKnown RBP2.43□□□□□ -2.02
SYNE2-202ENST00000344113 PLA2G2CQ5R387 149 aa2.43□□□□□ -2.02
SYNE2-202ENST00000344113 C19orf73Q9NVV2 129 aa2.43□□□□□ -2.02
SYNE2-202ENST00000344113 Q6ZSN1 163 aa2.43□□□□□ -2.02
SYNE2-202ENST00000344113 CELSR2Q9HCU4 2923 aa2.42□□□□□ -2.02
SYNE2-202ENST00000344113 DEFB136Q30KP8 78 aa2.42□□□□□ -2.02
SYNE2-202ENST00000344113 CHD7Q9P2D1 2997 aa2.42□□□□□ -2.02
SYNE2-202ENST00000344113 PATE3B3GLJ2 98 aa2.42□□□□□ -2.02
SYNE2-202ENST00000344113 ST20-AS1Q8NBB2 130 aa2.42□□□□□ -2.02
SYNE2-202ENST00000344113 Q8N377 158 aa2.42□□□□□ -2.02
SYNE2-202ENST00000344113 HRES1P13985 223 aa2.41□□□□□ -2.02
SYNE2-202ENST00000344113 TRANK1O15050 2925 aa2.41□□□□□ -2.02
SYNE2-202ENST00000344113 KRTAP29-1A8MX34 341 aaPredicted RBP2.41□□□□□ -2.02
SYNE2-202ENST00000344113 IGLV5-52A0A0A0MRZ9 124 aa2.41□□□□□ -2.02
SYNE2-202ENST00000344113 SPRR1BP22528 89 aa2.41□□□□□ -2.02
SYNE2-202ENST00000344113 COL4A1P02462 1669 aa2.41□□□□□ -2.02
SYNE2-202ENST00000344113 MUC22E2RYF6 1773 aaPredicted RBP2.4□□□□□ -2.02
SYNE2-202ENST00000344113 IGLV1-51P01701 117 aa2.4□□□□□ -2.02
SYNE2-202ENST00000344113 A0A096LNT2 108 aa2.4□□□□□ -2.03
SYNE2-202ENST00000344113 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
SYNE2-202ENST00000344113 SPRR1AP35321 89 aa2.4□□□□□ -2.03
SYNE2-202ENST00000344113 C20orf166-AS1Q96NR2 134 aa2.4□□□□□ -2.03
SYNE2-202ENST00000344113 LRBAP50851 2863 aa2.4□□□□□ -2.03
SYNE2-202ENST00000344113 DCHS2Q6V1P9 2916 aa2.4□□□□□ -2.03
SYNE2-202ENST00000344113 PCSK5Q92824 1860 aa2.39□□□□□ -2.03
SYNE2-202ENST00000344113 DSCR10P59022 87 aa2.39□□□□□ -2.03
SYNE2-202ENST00000344113 U3KQA8 63 aa2.39□□□□□ -2.03
SYNE2-202ENST00000344113 TEX15Q9BXT5 2789 aa2.39□□□□□ -2.03
SYNE2-202ENST00000344113 LTBP2Q14767 1821 aa2.39□□□□□ -2.03
SYNE2-202ENST00000344113 Q8NDZ9 215 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 ITPR3Q14573 2671 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 UNC80Q8N2C7 3258 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 ITPR2Q14571 2701 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.38□□□□□ -2.03
SYNE2-202ENST00000344113 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
SYNE2-202ENST00000344113 LINC00612Q8N6U2 182 aa2.37□□□□□ -2.03
SYNE2-202ENST00000344113 MKI67P46013 3256 aaKnown RBP2.37□□□□□ -2.03
SYNE2-202ENST00000344113 COL27A1Q8IZC6 1860 aaPredicted RBP2.37□□□□□ -2.03
SYNE2-202ENST00000344113 J3QL48 77 aa2.37□□□□□ -2.03
SYNE2-202ENST00000344113 Q96NJ1 140 aa2.37□□□□□ -2.03
SYNE2-202ENST00000344113 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
SYNE2-202ENST00000344113 Q5W150 140 aa2.36□□□□□ -2.03
SYNE2-202ENST00000344113 ZNF292O60281 2723 aa2.36□□□□□ -2.03
SYNE2-202ENST00000344113 RANBP2P49792 3224 aaKnown RBP2.36□□□□□ -2.03
SYNE2-202ENST00000344113 NBEAL2Q6ZNJ1 2754 aa2.36□□□□□ -2.03
SYNE2-202ENST00000344113 FLNBO75369 2602 aaKnown RBP2.35□□□□□ -2.03
SYNE2-202ENST00000344113 DEFB4AO15263 64 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 LINC00472Q9H8W2 130 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 ATMQ13315 3056 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 ZNF861PO60384 105 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 COL4A5P29400 1685 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 TYMSOSQ8TAI1 123 aa2.35□□□□□ -2.03
SYNE2-202ENST00000344113 A0A0G2JQZ4 141 aa2.34□□□□□ -2.03
SYNE2-202ENST00000344113 M0R2N4 97 aa2.34□□□□□ -2.03
SYNE2-202ENST00000344113 KMT2BQ9UMN6 2715 aaPredicted RBP2.34□□□□□ -2.04
SYNE2-202ENST00000344113 A0A1W2PPR1 153 aa2.34□□□□□ -2.04
SYNE2-202ENST00000344113 TENM3Q9P273 2699 aa2.34□□□□□ -2.04
SYNE2-202ENST00000344113 A0A1W2PNN7 141 aa2.34□□□□□ -2.04
SYNE2-202ENST00000344113 SETXQ7Z333 2677 aaKnown RBP2.33□□□□□ -2.04
SYNE2-202ENST00000344113 APCP25054 2843 aa2.33□□□□□ -2.04
SYNE2-202ENST00000344113 A8MUU9 505 aa2.33□□□□□ -2.04
SYNE2-202ENST00000344113 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
SYNE2-202ENST00000344113 M0QZ58 72 aa2.33□□□□□ -2.04
SYNE2-202ENST00000344113 ZZEF1O43149 2961 aa2.32□□□□□ -2.04
SYNE2-202ENST00000344113 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
SYNE2-202ENST00000344113 FLNAP21333 2647 aaKnown RBP2.32□□□□□ -2.04
SYNE2-202ENST00000344113 PDZD2O15018 2839 aa2.32□□□□□ -2.04
SYNE2-202ENST00000344113 WDFY4Q6ZS81 3184 aa2.31□□□□□ -2.04
SYNE2-202ENST00000344113 A0A0D9SG42 100 aa2.31□□□□□ -2.04
SYNE2-202ENST00000344113 A0A1W2PNU3 283 aaPredicted RBP2.31□□□□□ -2.04
SYNE2-202ENST00000344113 TACC2O95359 2948 aa2.3□□□□□ -2.04
SYNE2-202ENST00000344113 MMP24-AS1A0A0U1RRL7 71 aa2.3□□□□□ -2.04
SYNE2-202ENST00000344113 SRRM2Q9UQ35 2752 aaKnown RBP2.3□□□□□ -2.04
SYNE2-202ENST00000344113 CELSR1Q9NYQ6 3014 aa2.29□□□□□ -2.04
SYNE2-202ENST00000344113 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
SYNE2-202ENST00000344113 PANO1I0J062 215 aa2.29□□□□□ -2.04
SYNE2-202ENST00000344113 S4R3F8 94 aa2.29□□□□□ -2.04
SYNE2-202ENST00000344113 KRTAP4-16G5E9R7 235 aaPredicted RBP2.28□□□□□ -2.04
SYNE2-202ENST00000344113 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
SYNE2-202ENST00000344113 C10orf99Q6UWK7 81 aa2.28□□□□□ -2.04
SYNE2-202ENST00000344113 HIVEP1P15822 2718 aa2.27□□□□□ -2.05
SYNE2-202ENST00000344113 KRTAP11-1Q8IUC1 163 aa2.27□□□□□ -2.05
SYNE2-202ENST00000344113 NF1P21359 2839 aa2.26□□□□□ -2.05
SYNE2-202ENST00000344113 Q8N1X5 172 aa2.25□□□□□ -2.05
SYNE2-202ENST00000344113 J3QKU1 62 aa2.25□□□□□ -2.05
SYNE2-202ENST00000344113 INE1O15225 51 aa2.24□□□□□ -2.05
SYNE2-202ENST00000344113 NBDYA0A0U1RRE5 68 aa2.24□□□□□ -2.05
SYNE2-202ENST00000344113 FAM168BA1KXE4 195 aa2.24□□□□□ -2.05
SYNE2-202ENST00000344113 R4GN34 69 aa2.23□□□□□ -2.05
SYNE2-202ENST00000344113 NIPBLQ6KC79 2804 aaeCLIP2.23□□□□□ -2.05
SYNE2-202ENST00000344113 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
SYNE2-202ENST00000344113 P0C880 135 aa2.23□□□□□ -2.05
SYNE2-202ENST00000344113 GIG44P09565 113 aaPredicted RBP2.22□□□□□ -2.05
SYNE2-202ENST00000344113 CELSR3Q9NYQ7 3312 aa2.22□□□□□ -2.05
SYNE2-202ENST00000344113 KRTAP24-1Q3LI83 254 aa2.22□□□□□ -2.05
SYNE2-202ENST00000344113 MAPK1IP1LQ8NDC0 245 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms