RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 Q1T7F1 81 aa9.24□□□□□ -0.93
SSBP3-201ENST00000326956 FLNBO75369 2602 aaKnown RBP9.23□□□□□ -0.93
SSBP3-201ENST00000326956 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
SSBP3-201ENST00000326956 RPL37AP61513 92 aaKnown RBP9.22□□□□□ -0.93
SSBP3-201ENST00000326956 BAHCC1Q9P281 2608 aa9.22□□□□□ -0.93
SSBP3-201ENST00000326956 PSPHP1O15172 72 aa9.21□□□□□ -0.93
SSBP3-201ENST00000326956 A0A096LNI7 61 aa9.21□□□□□ -0.93
SSBP3-201ENST00000326956 TRAV22A0A0B4J277 110 aa9.19□□□□□ -0.94
SSBP3-201ENST00000326956 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
SSBP3-201ENST00000326956 CASC2Q6XLA1 102 aa9.19□□□□□ -0.94
SSBP3-201ENST00000326956 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
SSBP3-201ENST00000326956 CD164Q04900 197 aa9.19□□□□□ -0.94
SSBP3-201ENST00000326956 H0Y9P7 68 aa9.18□□□□□ -0.94
SSBP3-201ENST00000326956 B9D2Q9BPU9 175 aa9.18□□□□□ -0.94
SSBP3-201ENST00000326956 NOTCH1P46531 2555 aa9.16□□□□□ -0.94
SSBP3-201ENST00000326956 STAB1Q9NY15 2570 aa9.15□□□□□ -0.94
SSBP3-201ENST00000326956 MAST4O15021 2626 aa9.15□□□□□ -0.94
SSBP3-201ENST00000326956 PRR15Q8IV56 129 aa9.15□□□□□ -0.95
SSBP3-201ENST00000326956 H3BPC8 53 aa9.14□□□□□ -0.95
SSBP3-201ENST00000326956 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-201ENST00000326956 H0Y9J4 135 aa9.12□□□□□ -0.95
SSBP3-201ENST00000326956 KRTAP24-1Q3LI83 254 aa9.12□□□□□ -0.95
SSBP3-201ENST00000326956 A8MWP4 228 aa9.12□□□□□ -0.95
SSBP3-201ENST00000326956 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
SSBP3-201ENST00000326956 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
SSBP3-201ENST00000326956 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
SSBP3-201ENST00000326956 A8MUN3 132 aa9.11□□□□□ -0.95
SSBP3-201ENST00000326956 UBE2DNLQ8IWF7 75 aa9.1□□□□□ -0.95
SSBP3-201ENST00000326956 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
SSBP3-201ENST00000326956 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
SSBP3-201ENST00000326956 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
SSBP3-201ENST00000326956 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
SSBP3-201ENST00000326956 SPRR1BP22528 89 aa9.06□□□□□ -0.96
SSBP3-201ENST00000326956 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
SSBP3-201ENST00000326956 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
SSBP3-201ENST00000326956 LIMD2Q9BT23 127 aa9.04□□□□□ -0.96
SSBP3-201ENST00000326956 NBEAL1Q6ZS30 2694 aa9.04□□□□□ -0.96
SSBP3-201ENST00000326956 COL6A5A8TX70 2615 aa9.03□□□□□ -0.96
SSBP3-201ENST00000326956 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.96
SSBP3-201ENST00000326956 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
SSBP3-201ENST00000326956 ANK2Q01484 3957 aa9.01□□□□□ -0.97
SSBP3-201ENST00000326956 Q5VV11 94 aa9□□□□□ -0.97
SSBP3-201ENST00000326956 Q8N9P0 234 aaPredicted RBP9□□□□□ -0.97
SSBP3-201ENST00000326956 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
SSBP3-201ENST00000326956 K7EIL1 84 aa8.99□□□□□ -0.97
SSBP3-201ENST00000326956 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
SSBP3-201ENST00000326956 IGLV9-49A0A0B4J1Y8 123 aa8.98□□□□□ -0.97
SSBP3-201ENST00000326956 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
SSBP3-201ENST00000326956 FBN1P35555 2871 aaKnown RBP8.97□□□□□ -0.97
SSBP3-201ENST00000326956 COA5Q86WW8 74 aa8.97□□□□□ -0.97
SSBP3-201ENST00000326956 NDUFS5O43920 106 aa8.96□□□□□ -0.98
SSBP3-201ENST00000326956 TP53AIP1Q9HCN2 124 aa8.95□□□□□ -0.98
SSBP3-201ENST00000326956 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
SSBP3-201ENST00000326956 H3BS24 57 aa8.95□□□□□ -0.98
SSBP3-201ENST00000326956 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
SSBP3-201ENST00000326956 CDK2AP2O75956 126 aa8.94□□□□□ -0.98
SSBP3-201ENST00000326956 MOBPQ13875 183 aa8.93□□□□□ -0.98
SSBP3-201ENST00000326956 A6NED7 52 aa8.91□□□□□ -0.98
SSBP3-201ENST00000326956 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
SSBP3-201ENST00000326956 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
SSBP3-201ENST00000326956 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
SSBP3-201ENST00000326956 C8orf17Q9NRJ1 99 aa8.91□□□□□ -0.98
SSBP3-201ENST00000326956 A8MU10 97 aa8.9□□□□□ -0.98
SSBP3-201ENST00000326956 APLNQ9ULZ1 77 aa8.9□□□□□ -0.99
SSBP3-201ENST00000326956 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
SSBP3-201ENST00000326956 CMYA5Q8N3K9 4069 aa8.89□□□□□ -0.99
SSBP3-201ENST00000326956 PANO1I0J062 215 aa8.87□□□□□ -0.99
SSBP3-201ENST00000326956 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
SSBP3-201ENST00000326956 MGAM2Q2M2H8 2515 aa8.87□□□□□ -0.99
SSBP3-201ENST00000326956 Q75L30 129 aa8.86□□□□□ -0.99
SSBP3-201ENST00000326956 Q96NJ1 140 aa8.86□□□□□ -0.99
SSBP3-201ENST00000326956 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-201ENST00000326956 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
SSBP3-201ENST00000326956 A0A1B0GVX0 72 aa8.84□□□□□ -0.99
SSBP3-201ENST00000326956 SPAG11AQ6PDA7 123 aa8.84□□□□□ -0.99
SSBP3-201ENST00000326956 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
SSBP3-201ENST00000326956 Q6ZR54 194 aa8.83□□□□□ -1
SSBP3-201ENST00000326956 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
SSBP3-201ENST00000326956 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
SSBP3-201ENST00000326956 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
SSBP3-201ENST00000326956 HUWE1Q7Z6Z7 4374 aaKnown RBP8.82□□□□□ -1
SSBP3-201ENST00000326956 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
SSBP3-201ENST00000326956 DNAH3Q8TD57 4116 aa8.81□□□□□ -1
SSBP3-201ENST00000326956 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
SSBP3-201ENST00000326956 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
SSBP3-201ENST00000326956 LINC00483Q53H64 154 aa8.79□□□□□ -1
SSBP3-201ENST00000326956 LCA10Q71F78 164 aa8.79□□□□□ -1
SSBP3-201ENST00000326956 MDFIQ99750 246 aa8.78□□□□□ -1
SSBP3-201ENST00000326956 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
SSBP3-201ENST00000326956 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
SSBP3-201ENST00000326956 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
SSBP3-201ENST00000326956 WWC2-AS2Q96NR7 200 aa8.76□□□□□ -1.01
SSBP3-201ENST00000326956 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
SSBP3-201ENST00000326956 CDC42SE1Q9NRR8 79 aa8.76□□□□□ -1.01
SSBP3-201ENST00000326956 HRES1P13985 223 aa8.75□□□□□ -1.01
SSBP3-201ENST00000326956 KTN1-AS1Q86SY8 53 aa8.74□□□□□ -1.01
SSBP3-201ENST00000326956 PSORS1C2Q9UIG4 136 aa8.74□□□□□ -1.01
SSBP3-201ENST00000326956 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-201ENST00000326956 TENM2Q9NT68 2774 aa8.74□□□□□ -1.01
SSBP3-201ENST00000326956 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms