RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
VARS2-201ENST00000321897 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
VARS2-201ENST00000321897 DNAH10OSP0CZ25 163 aa9.97□□□□□ -0.81
VARS2-201ENST00000321897 Q8N377 158 aa9.97□□□□□ -0.81
VARS2-201ENST00000321897 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
VARS2-201ENST00000321897 K7EIL1 84 aa9.96□□□□□ -0.82
VARS2-201ENST00000321897 Q6ZRX8 168 aa9.96□□□□□ -0.82
VARS2-201ENST00000321897 RETNLBQ9BQ08 111 aa9.95□□□□□ -0.82
VARS2-201ENST00000321897 hDV103S1A0JD37 113 aa9.95□□□□□ -0.82
VARS2-201ENST00000321897 MDFIQ99750 246 aa9.94□□□□□ -0.82
VARS2-201ENST00000321897 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
VARS2-201ENST00000321897 OCR1Q9BZK8 76 aa9.93□□□□□ -0.82
VARS2-201ENST00000321897 F8WDY8 70 aa9.92□□□□□ -0.82
VARS2-201ENST00000321897 A0A1W2PNM2 257 aa9.92□□□□□ -0.82
VARS2-201ENST00000321897 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
VARS2-201ENST00000321897 GVQW2A0A096LPI5 108 aaPredicted RBP9.91□□□□□ -0.82
VARS2-201ENST00000321897 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
VARS2-201ENST00000321897 EPM2AB3EWF7 344 aa9.91□□□□□ -0.82
VARS2-201ENST00000321897 H3BNG1 76 aa9.89□□□□□ -0.83
VARS2-201ENST00000321897 TENM2Q9NT68 2774 aa9.86□□□□□ -0.83
VARS2-201ENST00000321897 ANAPC11Q9NYG5 84 aa9.85□□□□□ -0.83
VARS2-201ENST00000321897 IGLV1-50A0A075B6I6 118 aa9.82□□□□□ -0.84
VARS2-201ENST00000321897 IGLV5-52A0A0A0MRZ9 124 aa9.82□□□□□ -0.84
VARS2-201ENST00000321897 COA5Q86WW8 74 aa9.82□□□□□ -0.84
VARS2-201ENST00000321897 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
VARS2-201ENST00000321897 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
VARS2-201ENST00000321897 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
VARS2-201ENST00000321897 MOBPQ13875 183 aa9.8□□□□□ -0.84
VARS2-201ENST00000321897 NUPR2A6NF83 97 aa9.8□□□□□ -0.84
VARS2-201ENST00000321897 SPINK1P00995 79 aa9.78□□□□□ -0.84
VARS2-201ENST00000321897 DSCR10P59022 87 aa9.77□□□□□ -0.85
VARS2-201ENST00000321897 C16orf90A8MZG2 172 aa9.77□□□□□ -0.85
VARS2-201ENST00000321897 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
VARS2-201ENST00000321897 CD164Q04900 197 aa9.75□□□□□ -0.85
VARS2-201ENST00000321897 TRRAPQ9Y4A5 3859 aa9.74□□□□□ -0.85
VARS2-201ENST00000321897 IGLV8-61A0A075B6I0 122 aa9.74□□□□□ -0.85
VARS2-201ENST00000321897 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
VARS2-201ENST00000321897 A0A1B0GW54 56 aa9.72□□□□□ -0.85
VARS2-201ENST00000321897 C1orf134Q5TEV5 83 aa9.72□□□□□ -0.85
VARS2-201ENST00000321897 IGLV5-48A0A075B6I7 105 aa9.71□□□□□ -0.86
VARS2-201ENST00000321897 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
VARS2-201ENST00000321897 Q1T7F1 81 aa9.69□□□□□ -0.86
VARS2-201ENST00000321897 KTN1-AS1Q86SY8 53 aa9.69□□□□□ -0.86
VARS2-201ENST00000321897 A8MWP4 228 aa9.67□□□□□ -0.86
VARS2-201ENST00000321897 RTL8CO15255 209 aa9.67□□□□□ -0.86
VARS2-201ENST00000321897 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
VARS2-201ENST00000321897 ZNF706Q9Y5V0 76 aaPredicted RBP9.65□□□□□ -0.86
VARS2-201ENST00000321897 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
VARS2-201ENST00000321897 A0A1B0GU69 56 aa9.64□□□□□ -0.87
VARS2-201ENST00000321897 A8MU10 97 aa9.63□□□□□ -0.87
VARS2-201ENST00000321897 IGKV2D-30A0A075B6S6 120 aa9.63□□□□□ -0.87
VARS2-201ENST00000321897 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
VARS2-201ENST00000321897 H3BPC8 53 aa9.63□□□□□ -0.87
VARS2-201ENST00000321897 CYP4F30PQ9H0H9 118 aa9.63□□□□□ -0.87
VARS2-201ENST00000321897 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
VARS2-201ENST00000321897 DMBT1Q9UGM3 2413 aaPredicted RBP9.62□□□□□ -0.87
VARS2-201ENST00000321897 PRR26Q8N8Z3 221 aa9.62□□□□□ -0.87
VARS2-201ENST00000321897 TGP01266 2768 aa9.62□□□□□ -0.87
VARS2-201ENST00000321897 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
VARS2-201ENST00000321897 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
VARS2-201ENST00000321897 ZNF469Q96JG9 3925 aaPredicted RBP9.6□□□□□ -0.87
VARS2-201ENST00000321897 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
VARS2-201ENST00000321897 Q5VV11 94 aa9.6□□□□□ -0.87
VARS2-201ENST00000321897 C9orf163Q8N9P6 203 aa9.59□□□□□ -0.87
VARS2-201ENST00000321897 TP53AIP1Q9HCN2 124 aa9.58□□□□□ -0.88
VARS2-201ENST00000321897 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
VARS2-201ENST00000321897 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
VARS2-201ENST00000321897 C7orf65Q6ZTY9 151 aa9.56□□□□□ -0.88
VARS2-201ENST00000321897 SPRR4Q96PI1 79 aa9.55□□□□□ -0.88
VARS2-201ENST00000321897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.55□□□□□ -0.88
VARS2-201ENST00000321897 PRAC1Q96KF2 57 aa9.55□□□□□ -0.88
VARS2-201ENST00000321897 ACYP2P14621 99 aa9.53□□□□□ -0.88
VARS2-201ENST00000321897 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.88
VARS2-201ENST00000321897 A0A087WTM6 91 aa9.52□□□□□ -0.89
VARS2-201ENST00000321897 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.89
VARS2-201ENST00000321897 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
VARS2-201ENST00000321897 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
VARS2-201ENST00000321897 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
VARS2-201ENST00000321897 SPANXA2-OT1Q8N9U9 137 aa9.49□□□□□ -0.89
VARS2-201ENST00000321897 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
VARS2-201ENST00000321897 PLA2G2DQ9UNK4 145 aa9.47□□□□□ -0.89
VARS2-201ENST00000321897 PANO1I0J062 215 aa9.47□□□□□ -0.89
VARS2-201ENST00000321897 LCA10Q71F78 164 aa9.46□□□□□ -0.89
VARS2-201ENST00000321897 SPINK7P58062 85 aa9.45□□□□□ -0.9
VARS2-201ENST00000321897 SMR3BP02814 79 aaPredicted RBP9.45□□□□□ -0.9
VARS2-201ENST00000321897 SRRM2Q9UQ35 2752 aaKnown RBP9.45□□□□□ -0.9
VARS2-201ENST00000321897 TNP2Q05952 138 aa9.42□□□□□ -0.9
VARS2-201ENST00000321897 A0A1B0GVX0 72 aa9.41□□□□□ -0.9
VARS2-201ENST00000321897 K7ERS5 55 aa9.41□□□□□ -0.9
VARS2-201ENST00000321897 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
VARS2-201ENST00000321897 Q75L30 129 aa9.4□□□□□ -0.9
VARS2-201ENST00000321897 ZNF861PO60384 105 aa9.4□□□□□ -0.91
VARS2-201ENST00000321897 SPRR1AP35321 89 aa9.39□□□□□ -0.91
VARS2-201ENST00000321897 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
VARS2-201ENST00000321897 IGLV5-37A0A075B6J1 123 aa9.39□□□□□ -0.91
VARS2-201ENST00000321897 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
VARS2-201ENST00000321897 ZCCHC13Q8WW36 166 aaKnown RBP9.38□□□□□ -0.91
VARS2-201ENST00000321897 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
VARS2-201ENST00000321897 MIR22HGQ0VDD5 57 aa9.37□□□□□ -0.91
VARS2-201ENST00000321897 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms