RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CHTF8P0CG12 524 aa10.77□□□□□ -0.68
SFXN1-201ENST00000321442 KCNQ1DNQ9H478 68 aa10.77□□□□□ -0.68
SFXN1-201ENST00000321442 PHF5AQ7RTV0 110 aaKnown RBP10.77□□□□□ -0.69
SFXN1-201ENST00000321442 SEC61GP60059 68 aa10.77□□□□□ -0.69
SFXN1-201ENST00000321442 PDZD2O15018 2839 aa10.77□□□□□ -0.69
SFXN1-201ENST00000321442 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
SFXN1-201ENST00000321442 H3BNG1 76 aa10.75□□□□□ -0.69
SFXN1-201ENST00000321442 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
SFXN1-201ENST00000321442 A0A1B0GW54 56 aa10.74□□□□□ -0.69
SFXN1-201ENST00000321442 ERC2-IT1O76042 136 aa10.74□□□□□ -0.69
SFXN1-201ENST00000321442 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
SFXN1-201ENST00000321442 A0A1W2PNM2 257 aa10.72□□□□□ -0.69
SFXN1-201ENST00000321442 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
SFXN1-201ENST00000321442 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
SFXN1-201ENST00000321442 TRAV22A0A0B4J277 110 aa10.69□□□□□ -0.7
SFXN1-201ENST00000321442 IGFL1Q6UW32 110 aa10.68□□□□□ -0.7
SFXN1-201ENST00000321442 TENM3Q9P273 2699 aa10.67□□□□□ -0.7
SFXN1-201ENST00000321442 DNAH10OSP0CZ25 163 aa10.66□□□□□ -0.7
SFXN1-201ENST00000321442 MOBPQ13875 183 aa10.66□□□□□ -0.7
SFXN1-201ENST00000321442 CASC10Q5T4H9 136 aa10.66□□□□□ -0.7
SFXN1-201ENST00000321442 IGLV5-52A0A0A0MRZ9 124 aa10.65□□□□□ -0.7
SFXN1-201ENST00000321442 SPINK1P00995 79 aa10.65□□□□□ -0.7
SFXN1-201ENST00000321442 OXTP01178 125 aa10.65□□□□□ -0.71
SFXN1-201ENST00000321442 C1orf134Q5TEV5 83 aa10.64□□□□□ -0.71
SFXN1-201ENST00000321442 Q5XG85 94 aa10.64□□□□□ -0.71
SFXN1-201ENST00000321442 OCR1Q9BZK8 76 aa10.63□□□□□ -0.71
SFXN1-201ENST00000321442 C16orf90A8MZG2 172 aa10.62□□□□□ -0.71
SFXN1-201ENST00000321442 A8MWP4 228 aa10.57□□□□□ -0.72
SFXN1-201ENST00000321442 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-201ENST00000321442 IGLV5-48A0A075B6I7 105 aa10.57□□□□□ -0.72
SFXN1-201ENST00000321442 NBDYA0A0U1RRE5 68 aa10.57□□□□□ -0.72
SFXN1-201ENST00000321442 TP53AIP1Q9HCN2 124 aa10.56□□□□□ -0.72
SFXN1-201ENST00000321442 IGKV2D-30A0A075B6S6 120 aa10.56□□□□□ -0.72
SFXN1-201ENST00000321442 IGKV2-30P06310 120 aa10.56□□□□□ -0.72
SFXN1-201ENST00000321442 H3BPC8 53 aa10.55□□□□□ -0.72
SFXN1-201ENST00000321442 COA5Q86WW8 74 aa10.55□□□□□ -0.72
SFXN1-201ENST00000321442 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
SFXN1-201ENST00000321442 FAM229BQ4G0N7 80 aa10.54□□□□□ -0.72
SFXN1-201ENST00000321442 VPS13CQ709C8 3753 aa10.53□□□□□ -0.72
SFXN1-201ENST00000321442 DSCR10P59022 87 aa10.51□□□□□ -0.73
SFXN1-201ENST00000321442 WIPF1O43516 503 aa10.5□□□□□ -0.73
SFXN1-201ENST00000321442 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
SFXN1-201ENST00000321442 TGP01266 2768 aa10.48□□□□□ -0.73
SFXN1-201ENST00000321442 A0A1B0GU69 56 aa10.47□□□□□ -0.73
SFXN1-201ENST00000321442 TLX1NBP0CAT3 122 aa10.47□□□□□ -0.73
SFXN1-201ENST00000321442 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
SFXN1-201ENST00000321442 IGLV8-61A0A075B6I0 122 aa10.46□□□□□ -0.73
SFXN1-201ENST00000321442 ACYP2P14621 99 aa10.44□□□□□ -0.74
SFXN1-201ENST00000321442 SPACA4Q8TDM5 124 aa10.44□□□□□ -0.74
SFXN1-201ENST00000321442 K7ERS5 55 aa10.43□□□□□ -0.74
SFXN1-201ENST00000321442 PLA2G2DQ9UNK4 145 aa10.43□□□□□ -0.74
SFXN1-201ENST00000321442 RTL8CO15255 209 aa10.42□□□□□ -0.74
SFXN1-201ENST00000321442 MRPL34Q9BQ48 92 aaKnown RBP10.41□□□□□ -0.74
SFXN1-201ENST00000321442 DMBT1Q9UGM3 2413 aaPredicted RBP10.41□□□□□ -0.74
SFXN1-201ENST00000321442 LOC101927531A0A1B0GV80 90 aa10.41□□□□□ -0.74
SFXN1-201ENST00000321442 C8orf17Q9NRJ1 99 aa10.41□□□□□ -0.74
SFXN1-201ENST00000321442 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.75
SFXN1-201ENST00000321442 SPRR4Q96PI1 79 aa10.39□□□□□ -0.75
SFXN1-201ENST00000321442 CYP4F30PQ9H0H9 118 aa10.38□□□□□ -0.75
SFXN1-201ENST00000321442 ATP11AUNQ6ZP68 121 aa10.38□□□□□ -0.75
SFXN1-201ENST00000321442 APLNQ9ULZ1 77 aa10.36□□□□□ -0.75
SFXN1-201ENST00000321442 C7orf65Q6ZTY9 151 aa10.36□□□□□ -0.75
SFXN1-201ENST00000321442 TRRAPQ9Y4A5 3859 aa10.35□□□□□ -0.75
SFXN1-201ENST00000321442 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
SFXN1-201ENST00000321442 LINC00313P59037 77 aa10.33□□□□□ -0.76
SFXN1-201ENST00000321442 Q1T7F1 81 aa10.32□□□□□ -0.76
SFXN1-201ENST00000321442 A0A1B0GVX0 72 aa10.31□□□□□ -0.76
SFXN1-201ENST00000321442 PRR26Q8N8Z3 221 aa10.31□□□□□ -0.76
SFXN1-201ENST00000321442 IGLV5-37A0A075B6J1 123 aa10.29□□□□□ -0.76
SFXN1-201ENST00000321442 SMR3BP02814 79 aaPredicted RBP10.28□□□□□ -0.76
SFXN1-201ENST00000321442 SPANXA2-OT1Q8N9U9 137 aa10.28□□□□□ -0.76
SFXN1-201ENST00000321442 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
SFXN1-201ENST00000321442 A0A087WTM6 91 aa10.27□□□□□ -0.77
SFXN1-201ENST00000321442 SPRR1AP35321 89 aa10.25□□□□□ -0.77
SFXN1-201ENST00000321442 KRTAP26-1Q6PEX3 210 aa10.25□□□□□ -0.77
SFXN1-201ENST00000321442 CD164Q04900 197 aa10.25□□□□□ -0.77
SFXN1-201ENST00000321442 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
SFXN1-201ENST00000321442 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
SFXN1-201ENST00000321442 KTN1-AS1Q86SY8 53 aa10.23□□□□□ -0.77
SFXN1-201ENST00000321442 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
SFXN1-201ENST00000321442 TNP2Q05952 138 aa10.22□□□□□ -0.77
SFXN1-201ENST00000321442 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
SFXN1-201ENST00000321442 ZNF861PO60384 105 aa10.22□□□□□ -0.77
SFXN1-201ENST00000321442 Q8N9P0 234 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-201ENST00000321442 C8orf87E5RJ46 101 aa10.21□□□□□ -0.77
SFXN1-201ENST00000321442 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
SFXN1-201ENST00000321442 ZNF469Q96JG9 3925 aaPredicted RBP10.18□□□□□ -0.78
SFXN1-201ENST00000321442 Q96NJ1 140 aa10.17□□□□□ -0.78
SFXN1-201ENST00000321442 UQCR11O14957 56 aa10.17□□□□□ -0.78
SFXN1-201ENST00000321442 CDC42SE1Q9NRR8 79 aa10.15□□□□□ -0.79
SFXN1-201ENST00000321442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
SFXN1-201ENST00000321442 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
SFXN1-201ENST00000321442 Q5VV11 94 aa10.13□□□□□ -0.79
SFXN1-201ENST00000321442 MMP24-AS1A0A0U1RRL7 71 aa10.13□□□□□ -0.79
SFXN1-201ENST00000321442 TYMSOSQ8TAI1 123 aa10.12□□□□□ -0.79
SFXN1-201ENST00000321442 MIR22HGQ0VDD5 57 aa10.12□□□□□ -0.79
SFXN1-201ENST00000321442 LINC00472Q9H8W2 130 aa10.09□□□□□ -0.79
SFXN1-201ENST00000321442 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
SFXN1-201ENST00000321442 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
SFXN1-201ENST00000321442 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms