RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TRAV22A0A0B4J277 110 aa12.07□□□□□ -0.48
TRA2A-201ENST00000297071 C16orf90A8MZG2 172 aa12.06□□□□□ -0.48
TRA2A-201ENST00000297071 H0Y9J4 135 aa12.06□□□□□ -0.48
TRA2A-201ENST00000297071 CNBPP62633 177 aaKnown RBP12.05□□□□□ -0.48
TRA2A-201ENST00000297071 C1orf195Q5TG92 126 aa12.05□□□□□ -0.48
TRA2A-201ENST00000297071 PKIGQ9Y2B9 76 aa12.04□□□□□ -0.48
TRA2A-201ENST00000297071 A0A087WSZ3 146 aa12.02□□□□□ -0.49
TRA2A-201ENST00000297071 WFDC13Q8IUB5 93 aa11.98□□□□□ -0.49
TRA2A-201ENST00000297071 B9D2Q9BPU9 175 aa11.98□□□□□ -0.49
TRA2A-201ENST00000297071 A0A096LNI7 61 aa11.97□□□□□ -0.49
TRA2A-201ENST00000297071 UBE2AP49459 152 aa11.97□□□□□ -0.49
TRA2A-201ENST00000297071 A8MWP4 228 aa11.97□□□□□ -0.49
TRA2A-201ENST00000297071 CASC2Q6XLA1 102 aa11.96□□□□□ -0.49
TRA2A-201ENST00000297071 LINC00472Q9H8W2 130 aa11.96□□□□□ -0.49
TRA2A-201ENST00000297071 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
TRA2A-201ENST00000297071 PRLHP81277 87 aa11.95□□□□□ -0.5
TRA2A-201ENST00000297071 LINC00208Q96KT6 92 aa11.95□□□□□ -0.5
TRA2A-201ENST00000297071 ANK2Q01484 3957 aa11.94□□□□□ -0.5
TRA2A-201ENST00000297071 PKD1L1Q8TDX9 2849 aa11.94□□□□□ -0.5
TRA2A-201ENST00000297071 H0Y9P7 68 aa11.94□□□□□ -0.5
TRA2A-201ENST00000297071 DNAH3Q8TD57 4116 aa11.94□□□□□ -0.5
TRA2A-201ENST00000297071 C14orf177Q52M58 125 aa11.93□□□□□ -0.5
TRA2A-201ENST00000297071 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
TRA2A-201ENST00000297071 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
TRA2A-201ENST00000297071 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
TRA2A-201ENST00000297071 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
TRA2A-201ENST00000297071 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
TRA2A-201ENST00000297071 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.5
TRA2A-201ENST00000297071 MEGF8Q7Z7M0 2845 aa11.88□□□□□ -0.51
TRA2A-201ENST00000297071 RPL37AP61513 92 aaKnown RBP11.88□□□□□ -0.51
TRA2A-201ENST00000297071 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
TRA2A-201ENST00000297071 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
TRA2A-201ENST00000297071 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
TRA2A-201ENST00000297071 PRR4Q16378 134 aa11.85□□□□□ -0.51
TRA2A-201ENST00000297071 PSPHP1O15172 72 aa11.83□□□□□ -0.51
TRA2A-201ENST00000297071 KRTAP24-1Q3LI83 254 aa11.83□□□□□ -0.51
TRA2A-201ENST00000297071 MMP24-AS1A0A0U1RRL7 71 aa11.82□□□□□ -0.52
TRA2A-201ENST00000297071 ASB16-AS1Q495Z4 193 aa11.82□□□□□ -0.52
TRA2A-201ENST00000297071 Q8N9P0 234 aaPredicted RBP11.82□□□□□ -0.52
TRA2A-201ENST00000297071 TGP01266 2768 aa11.82□□□□□ -0.52
TRA2A-201ENST00000297071 NOTCH1P46531 2555 aa11.82□□□□□ -0.52
TRA2A-201ENST00000297071 IGLV7-46A0A075B6I9 117 aa11.81□□□□□ -0.52
TRA2A-201ENST00000297071 Q5VV11 94 aa11.81□□□□□ -0.52
TRA2A-201ENST00000297071 TP53AIP1Q9HCN2 124 aa11.81□□□□□ -0.52
TRA2A-201ENST00000297071 A8MUN3 132 aa11.8□□□□□ -0.52
TRA2A-201ENST00000297071 PHF5AQ7RTV0 110 aaKnown RBP11.79□□□□□ -0.52
TRA2A-201ENST00000297071 KRTAP1-5Q9BYS1 174 aa11.79□□□□□ -0.52
TRA2A-201ENST00000297071 KRTAP13-1Q8IUC0 172 aa11.78□□□□□ -0.52
TRA2A-201ENST00000297071 KRTAP11-1Q8IUC1 163 aa11.78□□□□□ -0.52
TRA2A-201ENST00000297071 MOBPQ13875 183 aa11.77□□□□□ -0.52
TRA2A-201ENST00000297071 PMAIP1Q13794 54 aa11.76□□□□□ -0.53
TRA2A-201ENST00000297071 LOC101927531A0A1B0GV80 90 aa11.74□□□□□ -0.53
TRA2A-201ENST00000297071 Q6ZR54 194 aa11.72□□□□□ -0.53
TRA2A-201ENST00000297071 K7EIL1 84 aa11.71□□□□□ -0.54
TRA2A-201ENST00000297071 Q75L30 129 aa11.71□□□□□ -0.54
TRA2A-201ENST00000297071 Q96NJ1 140 aa11.7□□□□□ -0.54
TRA2A-201ENST00000297071 COA5Q86WW8 74 aa11.7□□□□□ -0.54
TRA2A-201ENST00000297071 HUWE1Q7Z6Z7 4374 aaKnown RBP11.69□□□□□ -0.54
TRA2A-201ENST00000297071 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
TRA2A-201ENST00000297071 LINC00483Q53H64 154 aa11.68□□□□□ -0.54
TRA2A-201ENST00000297071 APLNQ9ULZ1 77 aa11.67□□□□□ -0.54
TRA2A-201ENST00000297071 SEC61GP60059 68 aa11.66□□□□□ -0.54
TRA2A-201ENST00000297071 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
TRA2A-201ENST00000297071 C8orf17Q9NRJ1 99 aa11.65□□□□□ -0.54
TRA2A-201ENST00000297071 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.55
TRA2A-201ENST00000297071 PRR15LQ9BU68 103 aa11.64□□□□□ -0.55
TRA2A-201ENST00000297071 KRTAP17-1Q9BYP8 105 aa11.61□□□□□ -0.55
TRA2A-201ENST00000297071 PLAC8Q9NZF1 115 aa11.61□□□□□ -0.55
TRA2A-201ENST00000297071 ZNF706Q9Y5V0 76 aaPredicted RBP11.61□□□□□ -0.55
TRA2A-201ENST00000297071 LINC01558Q9Y6Z2 57 aa11.61□□□□□ -0.55
TRA2A-201ENST00000297071 A0A1B0GVX0 72 aa11.6□□□□□ -0.55
TRA2A-201ENST00000297071 ATP11AUNQ6ZP68 121 aa11.59□□□□□ -0.55
TRA2A-201ENST00000297071 PRB2P02812 416 aaPredicted RBP11.58□□□□□ -0.56
TRA2A-201ENST00000297071 CD164Q04900 197 aa11.58□□□□□ -0.56
TRA2A-201ENST00000297071 DYNC2H1Q8NCM8 4307 aaKnown RBP11.56□□□□□ -0.56
TRA2A-201ENST00000297071 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
TRA2A-201ENST00000297071 DNAH10Q8IVF4 4471 aa11.55□□□□□ -0.56
TRA2A-201ENST00000297071 MGAM2Q2M2H8 2515 aa11.55□□□□□ -0.56
TRA2A-201ENST00000297071 MRPL34Q9BQ48 92 aaKnown RBP11.55□□□□□ -0.56
TRA2A-201ENST00000297071 Q6ZRN7 208 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-201ENST00000297071 DNAH9Q9NYC9 4486 aa11.54□□□□□ -0.56
TRA2A-201ENST00000297071 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
TRA2A-201ENST00000297071 CDC42SE1Q9NRR8 79 aa11.53□□□□□ -0.56
TRA2A-201ENST00000297071 TENM2Q9NT68 2774 aa11.52□□□□□ -0.57
TRA2A-201ENST00000297071 IGLV9-49A0A0B4J1Y8 123 aa11.51□□□□□ -0.57
TRA2A-201ENST00000297071 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
TRA2A-201ENST00000297071 PCOTHQ58A44 107 aa11.51□□□□□ -0.57
TRA2A-201ENST00000297071 WWC2-AS2Q96NR7 200 aa11.51□□□□□ -0.57
TRA2A-201ENST00000297071 PANO1I0J062 215 aa11.5□□□□□ -0.57
TRA2A-201ENST00000297071 LCA10Q71F78 164 aa11.5□□□□□ -0.57
TRA2A-201ENST00000297071 RYR3Q15413 4870 aa11.49□□□□□ -0.57
TRA2A-201ENST00000297071 A6NED7 52 aa11.49□□□□□ -0.57
TRA2A-201ENST00000297071 A8MU10 97 aa11.48□□□□□ -0.57
TRA2A-201ENST00000297071 KTN1-AS1Q86SY8 53 aa11.47□□□□□ -0.57
TRA2A-201ENST00000297071 KMT2CQ8NEZ4 4911 aaKnown RBP11.47□□□□□ -0.57
TRA2A-201ENST00000297071 IGHV6-1A0A0B4J1U7 121 aa11.45□□□□□ -0.58
TRA2A-201ENST00000297071 NDUFS5O43920 106 aa11.45□□□□□ -0.58
TRA2A-201ENST00000297071 HRES1P13985 223 aa11.45□□□□□ -0.58
TRA2A-201ENST00000297071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.44□□□□□ -0.58
TRA2A-201ENST00000297071 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms