RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 LY6G6CO95867 125 aa3.58□□□□□ -1.84
TOPBP1-201ENST00000260810 FAM229AH3BQW9 127 aa3.58□□□□□ -1.84
TOPBP1-201ENST00000260810 LINC00336Q6ZUF6 198 aa3.58□□□□□ -1.84
TOPBP1-201ENST00000260810 FAM19A5Q7Z5A7 132 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-201ENST00000260810 C6orf223Q8N319 242 aa3.57□□□□□ -1.84
TOPBP1-201ENST00000260810 FAM236DA0A1B0GTK5 79 aa3.57□□□□□ -1.84
TOPBP1-201ENST00000260810 FAM236CP0DP71 79 aa3.57□□□□□ -1.84
TOPBP1-201ENST00000260810 LINC01547P58512 204 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-201ENST00000260810 C8orf87E5RJ46 101 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 SPAG11AQ6PDA7 123 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 Q6ZSA8 131 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 CCKP06307 115 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 NDUFV3P56181 108 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 KRTAP13-1Q8IUC0 172 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 XAGE1AQ9HD64 81 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 LYPD5Q6UWN5 251 aa3.56□□□□□ -1.84
TOPBP1-201ENST00000260810 SMIM1B2RUZ4 78 aa3.55□□□□□ -1.84
TOPBP1-201ENST00000260810 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
TOPBP1-201ENST00000260810 CDKN2A-AS1Q9UH64 79 aa3.55□□□□□ -1.84
TOPBP1-201ENST00000260810 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
TOPBP1-201ENST00000260810 XGP55808 180 aa3.55□□□□□ -1.84
TOPBP1-201ENST00000260810 C3orf22Q8N5N4 141 aa3.55□□□□□ -1.84
TOPBP1-201ENST00000260810 FAM236AA0A1B0GUQ0 79 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 FAM236BA0A1B0GV22 79 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 LINC00526Q96FQ7 95 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 TRAV7A0A075B6U4 112 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 CXCL6P80162 114 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 K7ERJ3 54 aa3.54□□□□□ -1.84
TOPBP1-201ENST00000260810 GVQW2A0A096LPI5 108 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-201ENST00000260810 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
TOPBP1-201ENST00000260810 C9orf116Q5BN46 136 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-201ENST00000260810 Q8NBF4 154 aa3.53□□□□□ -1.84
TOPBP1-201ENST00000260810 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
TOPBP1-201ENST00000260810 FXYD2P54710 66 aa3.53□□□□□ -1.84
TOPBP1-201ENST00000260810 DNAH10OSP0CZ25 163 aa3.52□□□□□ -1.85
TOPBP1-201ENST00000260810 Q6ZRP5 223 aa3.52□□□□□ -1.85
TOPBP1-201ENST00000260810 FAM218AQ96MZ4 157 aa3.52□□□□□ -1.85
TOPBP1-201ENST00000260810 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
TOPBP1-201ENST00000260810 Q8N814 137 aa3.52□□□□□ -1.85
TOPBP1-201ENST00000260810 Q6ZVQ6 151 aa3.52□□□□□ -1.85
TOPBP1-201ENST00000260810 M0R2N4 97 aa3.51□□□□□ -1.85
TOPBP1-201ENST00000260810 PRR3P79522 188 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-201ENST00000260810 C1orf137Q5JT78 98 aa3.51□□□□□ -1.85
TOPBP1-201ENST00000260810 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
TOPBP1-201ENST00000260810 IGKV3D-7A0A0C4DH55 119 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 MT1HL1P0DM35 61 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 HCG22E2RYF7 251 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 TRIAP1O43715 76 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 Q6ZQY7 126 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 Q9BRP9 147 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 SMIM11BQ8TCY0 68 aa3.5□□□□□ -1.85
TOPBP1-201ENST00000260810 SMIM26A0A096LP01 95 aa3.49□□□□□ -1.85
TOPBP1-201ENST00000260810 CRYGAP11844 174 aa3.49□□□□□ -1.85
TOPBP1-201ENST00000260810 COX7CP15954 63 aa3.49□□□□□ -1.85
TOPBP1-201ENST00000260810 MOBPQ13875 183 aa3.49□□□□□ -1.85
TOPBP1-201ENST00000260810 PLA2G2DQ9UNK4 145 aa3.49□□□□□ -1.85
TOPBP1-201ENST00000260810 C16orf90A8MZG2 172 aa3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 NBDYA0A0U1RRE5 68 aa3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 LINC00575Q6W349 94 aa3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 SERTAD4-AS1Q5TG53 156 aa3.48□□□□□ -1.85
TOPBP1-201ENST00000260810 LOC110117498A0A087WWA1 95 aa3.47□□□□□ -1.85
TOPBP1-201ENST00000260810 A0A1W2PNN7 141 aa3.46□□□□□ -1.86
TOPBP1-201ENST00000260810 IGLV9-49A0A0B4J1Y8 123 aa3.46□□□□□ -1.86
TOPBP1-201ENST00000260810 ACYP2P14621 99 aa3.46□□□□□ -1.86
TOPBP1-201ENST00000260810 SSBP3-AS1Q7Z2R9 100 aa3.46□□□□□ -1.86
TOPBP1-201ENST00000260810 LOC101927531A0A1B0GV80 90 aa3.46□□□□□ -1.86
TOPBP1-201ENST00000260810 C6orf48Q9UBA6 75 aa3.46□□□□□ -1.86
TOPBP1-201ENST00000260810 ERC2-IT1O76042 136 aa3.45□□□□□ -1.86
TOPBP1-201ENST00000260810 C9orf163Q8N9P6 203 aa3.45□□□□□ -1.86
TOPBP1-201ENST00000260810 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
TOPBP1-201ENST00000260810 SDIM1Q6ZPB5 146 aa3.45□□□□□ -1.86
TOPBP1-201ENST00000260810 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
TOPBP1-201ENST00000260810 TLX1NBP0CAT3 122 aa3.44□□□□□ -1.86
TOPBP1-201ENST00000260810 CIRBP-AS1Q8TBR5 109 aa3.44□□□□□ -1.86
TOPBP1-201ENST00000260810 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-201ENST00000260810 TNP2Q05952 138 aa3.44□□□□□ -1.86
TOPBP1-201ENST00000260810 LCE2CQ5TA81 110 aa3.44□□□□□ -1.86
TOPBP1-201ENST00000260810 TRAV22A0A0B4J277 110 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 TRBV7-4A0A0J9YYF1 115 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 SMCR5Q8TEV8 140 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 UNQ6190/PRO20217Q6UXQ8 127 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 CD164Q04900 197 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 H0Y9P7 68 aa3.43□□□□□ -1.86
TOPBP1-201ENST00000260810 LINC00313P59037 77 aa3.42□□□□□ -1.86
TOPBP1-201ENST00000260810 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
TOPBP1-201ENST00000260810 A0A0G2JQZ4 141 aa3.42□□□□□ -1.86
TOPBP1-201ENST00000260810 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
TOPBP1-201ENST00000260810 A6NED7 52 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 Q6ZRX8 168 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms