RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TNP2Q05952 138 aa6.75□□□□□ -1.33
CX3CL1-201ENST00000006053 HCG22E2RYF7 251 aa6.74□□□□□ -1.33
CX3CL1-201ENST00000006053 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
CX3CL1-201ENST00000006053 DSCR10P59022 87 aa6.74□□□□□ -1.33
CX3CL1-201ENST00000006053 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
CX3CL1-201ENST00000006053 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 DEFB116Q30KQ4 102 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 Q5VV11 94 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 PSCAO43653 123 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 MDFIQ99750 246 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 NDUFS5O43920 106 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 SPRR1AP35321 89 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
CX3CL1-201ENST00000006053 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
CX3CL1-201ENST00000006053 TENM2Q9NT68 2774 aa6.72□□□□□ -1.33
CX3CL1-201ENST00000006053 A0A1B0GW54 56 aa6.71□□□□□ -1.33
CX3CL1-201ENST00000006053 SPRR4Q96PI1 79 aa6.71□□□□□ -1.33
CX3CL1-201ENST00000006053 A6NED7 52 aa6.71□□□□□ -1.34
CX3CL1-201ENST00000006053 LINC00476Q8WZB0 136 aa6.71□□□□□ -1.34
CX3CL1-201ENST00000006053 IGLV5-37A0A075B6J1 123 aa6.7□□□□□ -1.34
CX3CL1-201ENST00000006053 REG3GQ6UW15 175 aa6.7□□□□□ -1.34
CX3CL1-201ENST00000006053 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
CX3CL1-201ENST00000006053 ANK2Q01484 3957 aa6.68□□□□□ -1.34
CX3CL1-201ENST00000006053 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
CX3CL1-201ENST00000006053 PRLHP81277 87 aa6.68□□□□□ -1.34
CX3CL1-201ENST00000006053 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.68□□□□□ -1.34
CX3CL1-201ENST00000006053 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
CX3CL1-201ENST00000006053 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
CX3CL1-201ENST00000006053 A0A087WSZ3 146 aa6.66□□□□□ -1.34
CX3CL1-201ENST00000006053 LCE6AA0A183 80 aa6.66□□□□□ -1.34
CX3CL1-201ENST00000006053 LCA10Q71F78 164 aa6.66□□□□□ -1.34
CX3CL1-201ENST00000006053 RPL37AP61513 92 aaKnown RBP6.65□□□□□ -1.34
CX3CL1-201ENST00000006053 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.35
CX3CL1-201ENST00000006053 C7orf65Q6ZTY9 151 aa6.65□□□□□ -1.35
CX3CL1-201ENST00000006053 A6NN06 94 aa6.64□□□□□ -1.35
CX3CL1-201ENST00000006053 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
CX3CL1-201ENST00000006053 A0A096LNI7 61 aa6.62□□□□□ -1.35
CX3CL1-201ENST00000006053 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
CX3CL1-201ENST00000006053 Q8N9P0 234 aaPredicted RBP6.61□□□□□ -1.35
CX3CL1-201ENST00000006053 B9D2Q9BPU9 175 aa6.61□□□□□ -1.35
CX3CL1-201ENST00000006053 MP68P56378 58 aa6.61□□□□□ -1.35
CX3CL1-201ENST00000006053 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
CX3CL1-201ENST00000006053 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
CX3CL1-201ENST00000006053 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
CX3CL1-201ENST00000006053 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
CX3CL1-201ENST00000006053 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
CX3CL1-201ENST00000006053 NDUFB1O75438 58 aa6.57□□□□□ -1.36
CX3CL1-201ENST00000006053 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
CX3CL1-201ENST00000006053 DNAH1Q9P2D7 4330 aa6.56□□□□□ -1.36
CX3CL1-201ENST00000006053 H0Y9P7 68 aa6.56□□□□□ -1.36
CX3CL1-201ENST00000006053 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
CX3CL1-201ENST00000006053 K7EIL1 84 aa6.55□□□□□ -1.36
CX3CL1-201ENST00000006053 KRTAP1-5Q9BYS1 174 aa6.55□□□□□ -1.36
CX3CL1-201ENST00000006053 MOBPQ13875 183 aa6.55□□□□□ -1.36
CX3CL1-201ENST00000006053 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
CX3CL1-201ENST00000006053 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
CX3CL1-201ENST00000006053 IGLV8-61A0A075B6I0 122 aa6.55□□□□□ -1.36
CX3CL1-201ENST00000006053 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
CX3CL1-201ENST00000006053 CMYA5Q8N3K9 4069 aa6.54□□□□□ -1.36
CX3CL1-201ENST00000006053 KRTAP29-1A8MX34 341 aaPredicted RBP6.53□□□□□ -1.36
CX3CL1-201ENST00000006053 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
CX3CL1-201ENST00000006053 Q75L30 129 aa6.53□□□□□ -1.36
CX3CL1-201ENST00000006053 H0Y9J4 135 aa6.53□□□□□ -1.36
CX3CL1-201ENST00000006053 TGP01266 2768 aa6.52□□□□□ -1.37
CX3CL1-201ENST00000006053 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
CX3CL1-201ENST00000006053 A8MWP4 228 aa6.5□□□□□ -1.37
CX3CL1-201ENST00000006053 LINC00313P59037 77 aa6.5□□□□□ -1.37
CX3CL1-201ENST00000006053 LOC101927531A0A1B0GV80 90 aa6.5□□□□□ -1.37
CX3CL1-201ENST00000006053 LINC00472Q9H8W2 130 aa6.49□□□□□ -1.37
CX3CL1-201ENST00000006053 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
CX3CL1-201ENST00000006053 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
CX3CL1-201ENST00000006053 COL7A1Q02388 2944 aa6.48□□□□□ -1.37
CX3CL1-201ENST00000006053 LINC01554Q52M75 96 aa6.48□□□□□ -1.37
CX3CL1-201ENST00000006053 LYSTQ99698 3801 aa6.47□□□□□ -1.37
CX3CL1-201ENST00000006053 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
CX3CL1-201ENST00000006053 SPRR1BP22528 89 aa6.46□□□□□ -1.38
CX3CL1-201ENST00000006053 DNAH3Q8TD57 4116 aa6.46□□□□□ -1.38
CX3CL1-201ENST00000006053 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
CX3CL1-201ENST00000006053 H3BPC8 53 aa6.46□□□□□ -1.38
CX3CL1-201ENST00000006053 COA5Q86WW8 74 aa6.46□□□□□ -1.38
CX3CL1-201ENST00000006053 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
CX3CL1-201ENST00000006053 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
CX3CL1-201ENST00000006053 SPINK7P58062 85 aa6.45□□□□□ -1.38
CX3CL1-201ENST00000006053 C14orf177Q52M58 125 aa6.45□□□□□ -1.38
CX3CL1-201ENST00000006053 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
CX3CL1-201ENST00000006053 DNAH9Q9NYC9 4486 aa6.44□□□□□ -1.38
CX3CL1-201ENST00000006053 PANO1I0J062 215 aa6.43□□□□□ -1.38
CX3CL1-201ENST00000006053 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
CX3CL1-201ENST00000006053 C9orf163Q8N9P6 203 aa6.42□□□□□ -1.38
CX3CL1-201ENST00000006053 APLNQ9ULZ1 77 aa6.39□□□□□ -1.39
CX3CL1-201ENST00000006053 IGHV6-1A0A0B4J1U7 121 aa6.38□□□□□ -1.39
CX3CL1-201ENST00000006053 IGLV7-46A0A075B6I9 117 aa6.37□□□□□ -1.39
CX3CL1-201ENST00000006053 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
CX3CL1-201ENST00000006053 Q96NJ1 140 aa6.37□□□□□ -1.39
CX3CL1-201ENST00000006053 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
CX3CL1-201ENST00000006053 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
CX3CL1-201ENST00000006053 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
CX3CL1-201ENST00000006053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
CX3CL1-201ENST00000006053 CDK2AP2O75956 126 aa6.35□□□□□ -1.39
CX3CL1-201ENST00000006053 ANAPC11Q9NYG5 84 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms