RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 CFC1P0CG37 223 aa8.08□□□□□ -1.12
PHGDH-220ENST00000641570 PSMB2P49721 201 aa8.08□□□□□ -1.12
PHGDH-220ENST00000641570 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
PHGDH-220ENST00000641570 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
PHGDH-220ENST00000641570 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
PHGDH-220ENST00000641570 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
PHGDH-220ENST00000641570 COX6CP09669 75 aa8.07□□□□□ -1.12
PHGDH-220ENST00000641570 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
PHGDH-220ENST00000641570 K7ERJ3 54 aa8.05□□□□□ -1.12
PHGDH-220ENST00000641570 SLC25A20O43772 301 aa8.05□□□□□ -1.12
PHGDH-220ENST00000641570 Q5VSD8 79 aa8.05□□□□□ -1.12
PHGDH-220ENST00000641570 COX7BP24311 80 aa8.04□□□□□ -1.12
PHGDH-220ENST00000641570 C6orf99Q4VX62 202 aa8.04□□□□□ -1.12
PHGDH-220ENST00000641570 A0A1B0GWB2 263 aa8.03□□□□□ -1.12
PHGDH-220ENST00000641570 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
PHGDH-220ENST00000641570 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
PHGDH-220ENST00000641570 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
PHGDH-220ENST00000641570 IGLV7-43P04211 117 aa8.02□□□□□ -1.13
PHGDH-220ENST00000641570 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
PHGDH-220ENST00000641570 EPPK1P58107 5090 aaKnown RBP8.02□□□□□ -1.13
PHGDH-220ENST00000641570 DNAH8Q96JB1 4490 aa8.02□□□□□ -1.13
PHGDH-220ENST00000641570 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
PHGDH-220ENST00000641570 PRLHP81277 87 aa8.01□□□□□ -1.13
PHGDH-220ENST00000641570 Q8N1X5 172 aa8.01□□□□□ -1.13
PHGDH-220ENST00000641570 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
PHGDH-220ENST00000641570 ZNF861PO60384 105 aa8□□□□□ -1.13
PHGDH-220ENST00000641570 COL5A1-AS1Q5SY13 56 aa8□□□□□ -1.13
PHGDH-220ENST00000641570 H0YGX0 51 aa7.99□□□□□ -1.13
PHGDH-220ENST00000641570 Q6ZRX8 168 aa7.99□□□□□ -1.13
PHGDH-220ENST00000641570 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-220ENST00000641570 BIRC6Q9NR09 4857 aa7.99□□□□□ -1.13
PHGDH-220ENST00000641570 B5MCH6 92 aa7.98□□□□□ -1.13
PHGDH-220ENST00000641570 TSPAN13O95857 204 aa7.98□□□□□ -1.13
PHGDH-220ENST00000641570 SPRR1AP35321 89 aa7.98□□□□□ -1.13
PHGDH-220ENST00000641570 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
PHGDH-220ENST00000641570 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
PHGDH-220ENST00000641570 H0Y9J4 135 aa7.97□□□□□ -1.13
PHGDH-220ENST00000641570 DNAL4O96015 105 aa7.97□□□□□ -1.13
PHGDH-220ENST00000641570 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
PHGDH-220ENST00000641570 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
PHGDH-220ENST00000641570 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
PHGDH-220ENST00000641570 TRIAP1O43715 76 aa7.95□□□□□ -1.14
PHGDH-220ENST00000641570 GHRHP01286 108 aa7.95□□□□□ -1.14
PHGDH-220ENST00000641570 SNHG12Q9BXW3 62 aa7.95□□□□□ -1.14
PHGDH-220ENST00000641570 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
PHGDH-220ENST00000641570 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-220ENST00000641570 H3BUT2 72 aa7.92□□□□□ -1.14
PHGDH-220ENST00000641570 FABP2P12104 132 aa7.92□□□□□ -1.14
PHGDH-220ENST00000641570 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
PHGDH-220ENST00000641570 RYR1P21817 5038 aa7.91□□□□□ -1.14
PHGDH-220ENST00000641570 A0A1B0GX51 115 aa7.91□□□□□ -1.14
PHGDH-220ENST00000641570 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
PHGDH-220ENST00000641570 NAA38Q9BRA0 125 aaKnown RBP7.91□□□□□ -1.14
PHGDH-220ENST00000641570 ATXN8Q156A1 80 aa7.9□□□□□ -1.14
PHGDH-220ENST00000641570 LINC00575Q6W349 94 aa7.9□□□□□ -1.14
PHGDH-220ENST00000641570 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
PHGDH-220ENST00000641570 DEFB105AQ8NG35 78 aa7.89□□□□□ -1.15
PHGDH-220ENST00000641570 Q9BRP9 147 aa7.89□□□□□ -1.15
PHGDH-220ENST00000641570 TRBV20-1A0A075B6N2 111 aa7.88□□□□□ -1.15
PHGDH-220ENST00000641570 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
PHGDH-220ENST00000641570 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
PHGDH-220ENST00000641570 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
PHGDH-220ENST00000641570 CLEC2BQ92478 149 aa7.88□□□□□ -1.15
PHGDH-220ENST00000641570 H3BQ85 93 aa7.87□□□□□ -1.15
PHGDH-220ENST00000641570 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.87□□□□□ -1.15
PHGDH-220ENST00000641570 A0A1W2PPM0 123 aa7.86□□□□□ -1.15
PHGDH-220ENST00000641570 F8WEM9 126 aa7.86□□□□□ -1.15
PHGDH-220ENST00000641570 Q6ZQY7 126 aa7.86□□□□□ -1.15
PHGDH-220ENST00000641570 TEX49A0A1B0GTD5 131 aa7.85□□□□□ -1.15
PHGDH-220ENST00000641570 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
PHGDH-220ENST00000641570 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
PHGDH-220ENST00000641570 HSPG2P98160 4391 aa7.85□□□□□ -1.15
PHGDH-220ENST00000641570 LST1O00453 97 aa7.84□□□□□ -1.15
PHGDH-220ENST00000641570 TRACP01848 142 aa7.84□□□□□ -1.15
PHGDH-220ENST00000641570 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
PHGDH-220ENST00000641570 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
PHGDH-220ENST00000641570 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
PHGDH-220ENST00000641570 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
PHGDH-220ENST00000641570 SPCS1Q9Y6A9 102 aa7.83□□□□□ -1.16
PHGDH-220ENST00000641570 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
PHGDH-220ENST00000641570 CRYGAP11844 174 aa7.82□□□□□ -1.16
PHGDH-220ENST00000641570 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-220ENST00000641570 C9orf153Q5TBE3 101 aa7.82□□□□□ -1.16
PHGDH-220ENST00000641570 GTF2H5Q6ZYL4 71 aa7.82□□□□□ -1.16
PHGDH-220ENST00000641570 ST20-AS1Q8NBB2 130 aa7.82□□□□□ -1.16
PHGDH-220ENST00000641570 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
PHGDH-220ENST00000641570 TCL1BO95988 128 aa7.81□□□□□ -1.16
PHGDH-220ENST00000641570 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
PHGDH-220ENST00000641570 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
PHGDH-220ENST00000641570 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
PHGDH-220ENST00000641570 FAT1Q14517 4588 aa7.77□□□□□ -1.17
PHGDH-220ENST00000641570 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
PHGDH-220ENST00000641570 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
PHGDH-220ENST00000641570 TYMSOSQ8TAI1 123 aa7.77□□□□□ -1.17
PHGDH-220ENST00000641570 C9JAW5 83 aa7.76□□□□□ -1.17
PHGDH-220ENST00000641570 OXTP01178 125 aa7.76□□□□□ -1.17
PHGDH-220ENST00000641570 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
PHGDH-220ENST00000641570 H3BMG7 143 aa7.75□□□□□ -1.17
PHGDH-220ENST00000641570 J3QL48 77 aa7.75□□□□□ -1.17
PHGDH-220ENST00000641570 K7EP34 96 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms