RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	FAM236D	A0A1B0GTK5	79 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	C3orf84	H3BNL1	204 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	FAM236C	P0DP71	79 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	NBEAL1	Q6ZS30	2694 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	LOC107984640	A0A0U1RRK4	108 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001		M0R2N4	97 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	IGLV6-57	P01721	117 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	BAHCC1	Q9P281	2608 aa		5.15	□□□□□ -1.58
HNRNPU-223	ENST00000640001	VPREB1	P12018	145 aa		5.15	□□□□□ -1.59
HNRNPU-223	ENST00000640001	C7orf33	Q8WU49	177 aa		5.15	□□□□□ -1.59
HNRNPU-223	ENST00000640001	FAM19A1	Q7Z5A9	133 aa		5.15	□□□□□ -1.59
HNRNPU-223	ENST00000640001		Q8NDZ9	215 aa		5.15	□□□□□ -1.59
HNRNPU-223	ENST00000640001		A6NED7	52 aa		5.14	□□□□□ -1.59
HNRNPU-223	ENST00000640001	DNAH10OS	P0CZ25	163 aa		5.14	□□□□□ -1.59
HNRNPU-223	ENST00000640001	ATP5EP2	Q5VTU8	51 aa		5.14	□□□□□ -1.59
HNRNPU-223	ENST00000640001	LINC01600	Q96MT4	127 aa		5.14	□□□□□ -1.59
HNRNPU-223	ENST00000640001	C3orf22	Q8N5N4	141 aa		5.13	□□□□□ -1.59
HNRNPU-223	ENST00000640001	ELOF1	P60002	83 aa	Known RBP	5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	C14orf177	Q52M58	125 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	CASC10	Q5T4H9	136 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	DHRS4-AS1	Q9P1J3	65 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001		F8WDY8	70 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	UBE2A	P49459	152 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	FAM168B	A1KXE4	195 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	SERTAD4-AS1	Q5TG53	156 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	C22orf24	Q9Y442	160 aa		5.12	□□□□□ -1.59
HNRNPU-223	ENST00000640001	PRR4	Q16378	134 aa		5.11	□□□□□ -1.59
HNRNPU-223	ENST00000640001		A0A096LNI7	61 aa		5.11	□□□□□ -1.59
HNRNPU-223	ENST00000640001	BPY2	O14599	106 aa		5.11	□□□□□ -1.59
HNRNPU-223	ENST00000640001	LINC00167	Q96N53	147 aa		5.11	□□□□□ -1.59
HNRNPU-223	ENST00000640001		Q6ZVQ6	151 aa		5.1	□□□□□ -1.59
HNRNPU-223	ENST00000640001	COX7C	P15954	63 aa		5.1	□□□□□ -1.59
HNRNPU-223	ENST00000640001	TM2D3	Q9BRN9	247 aa		5.1	□□□□□ -1.59
HNRNPU-223	ENST00000640001	NHLRC4	P0CG21	123 aa	Predicted RBP	5.1	□□□□□ -1.59
HNRNPU-223	ENST00000640001		Q6ZQT0	140 aa		5.1	□□□□□ -1.59
HNRNPU-223	ENST00000640001	SERP2	Q8N6R1	65 aa		5.09	□□□□□ -1.59
HNRNPU-223	ENST00000640001	FLG2	Q5D862	2391 aa	Predicted RBP	5.09	□□□□□ -1.59
HNRNPU-223	ENST00000640001	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.09	□□□□□ -1.59
HNRNPU-223	ENST00000640001	LRCOL1	A6NCL2	159 aa		5.09	□□□□□ -1.59
HNRNPU-223	ENST00000640001	REG3G	Q6UW15	175 aa		5.09	□□□□□ -1.59
HNRNPU-223	ENST00000640001	PRY	O14603	147 aa		5.08	□□□□□ -1.6
HNRNPU-223	ENST00000640001	PRLH	P81277	87 aa		5.08	□□□□□ -1.6
HNRNPU-223	ENST00000640001	LINC01547	P58512	204 aa	Predicted RBP	5.08	□□□□□ -1.6
HNRNPU-223	ENST00000640001	C1orf137	Q5JT78	98 aa		5.07	□□□□□ -1.6
HNRNPU-223	ENST00000640001	SNURF	Q9Y675	71 aa		5.07	□□□□□ -1.6
HNRNPU-223	ENST00000640001	TRBV7-6	A0A0J9YX20	115 aa		5.07	□□□□□ -1.6
HNRNPU-223	ENST00000640001	LINC00528	Q8N1L1	170 aa		5.07	□□□□□ -1.6
HNRNPU-223	ENST00000640001	SMIM26	A0A096LP01	95 aa		5.06	□□□□□ -1.6
HNRNPU-223	ENST00000640001	NUPR2	A6NF83	97 aa		5.06	□□□□□ -1.6
HNRNPU-223	ENST00000640001	ST20-AS1	Q8NBB2	130 aa		5.06	□□□□□ -1.6
HNRNPU-223	ENST00000640001		Q8N9L7	120 aa		5.06	□□□□□ -1.6
HNRNPU-223	ENST00000640001	ANK3	Q12955	4377 aa	Known RBP	5.06	□□□□□ -1.6
HNRNPU-223	ENST00000640001	LOC110117498	A0A087WWA1	95 aa		5.06	□□□□□ -1.6
HNRNPU-223	ENST00000640001		K7ERS5	55 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001	OBSCN-AS1	Q96MR7	158 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001	CHTF8	P0CG12	524 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001	KRTAP26-1	Q6PEX3	210 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001		Q6ZRX8	168 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001	MDFI	Q99750	246 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001	B9D2	Q9BPU9	175 aa		5.05	□□□□□ -1.6
HNRNPU-223	ENST00000640001	TENM3	Q9P273	2699 aa		5.04	□□□□□ -1.6
HNRNPU-223	ENST00000640001	KCNQ1DN	Q9H478	68 aa		5.04	□□□□□ -1.6
HNRNPU-223	ENST00000640001	IGLV1-50	A0A075B6I6	118 aa		5.03	□□□□□ -1.6
HNRNPU-223	ENST00000640001	NDUFB1	O75438	58 aa		5.03	□□□□□ -1.6
HNRNPU-223	ENST00000640001	STAB2	Q8WWQ8	2551 aa		5.03	□□□□□ -1.6
HNRNPU-223	ENST00000640001	IGKV4-1	P06312	121 aa		5.02	□□□□□ -1.61
HNRNPU-223	ENST00000640001	PHF5A	Q7RTV0	110 aa	Known RBP	5.02	□□□□□ -1.61
HNRNPU-223	ENST00000640001	LY6G6C	O95867	125 aa		5.02	□□□□□ -1.61
HNRNPU-223	ENST00000640001	PSPHP1	O15172	72 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001	PRR15L	Q9BU68	103 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001	NBDY	A0A0U1RRE5	68 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001	C16orf90	A8MZG2	172 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001	TLX1NB	P0CAT3	122 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001	DEFB116	Q30KQ4	102 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001		Q8N377	158 aa		5.01	□□□□□ -1.61
HNRNPU-223	ENST00000640001	CXCL6	P80162	114 aa		5	□□□□□ -1.61
HNRNPU-223	ENST00000640001	TRBV7-4	A0A0J9YYF1	115 aa		5	□□□□□ -1.61
HNRNPU-223	ENST00000640001		Q9BRP9	147 aa		5	□□□□□ -1.61
HNRNPU-223	ENST00000640001	LINC00474	Q9P2X8	69 aa		5	□□□□□ -1.61
HNRNPU-223	ENST00000640001	TRAV7	A0A075B6U4	112 aa		5	□□□□□ -1.61
HNRNPU-223	ENST00000640001	PRO0628	Q9UI54	55 aa		5	□□□□□ -1.61
HNRNPU-223	ENST00000640001		A0A087WSZ3	146 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001	IGLV9-49	A0A0B4J1Y8	123 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001	ERC2-IT1	O76042	136 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001	APLN	Q9ULZ1	77 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001		A0A1W2PNN7	141 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001		H0Y9J4	135 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001	WFDC13	Q8IUB5	93 aa		4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001	FBN1	P35555	2871 aa	Known RBP	4.99	□□□□□ -1.61
HNRNPU-223	ENST00000640001		A0A0G2JQZ4	141 aa		4.98	□□□□□ -1.61
HNRNPU-223	ENST00000640001	CASC2	Q6XLA1	102 aa		4.98	□□□□□ -1.61
HNRNPU-223	ENST00000640001	FAM30A	Q9NZY2	134 aa		4.98	□□□□□ -1.61
HNRNPU-223	ENST00000640001	LINC00476	Q8WZB0	136 aa		4.98	□□□□□ -1.61
HNRNPU-223	ENST00000640001	KRTAP1-5	Q9BYS1	174 aa		4.98	□□□□□ -1.61
HNRNPU-223	ENST00000640001	PLA2G2D	Q9UNK4	145 aa		4.98	□□□□□ -1.61
HNRNPU-223	ENST00000640001	TRRAP	Q9Y4A5	3859 aa		4.97	□□□□□ -1.61
HNRNPU-223	ENST00000640001	NDUFC1	O43677	76 aa		4.97	□□□□□ -1.61
HNRNPU-223	ENST00000640001		Q8NBF4	154 aa		4.97	□□□□□ -1.61
HNRNPU-223	ENST00000640001	CRYGA	P11844	174 aa		4.97	□□□□□ -1.61
HNRNPU-223	ENST00000640001	EPM2A	B3EWF7	344 aa		4.96	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms