RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 HELZ2Q9BYK8 2649 aaKnown RBP10.31□□□□□ -0.76
UBE3A-227ENST00000638011 APLNQ9ULZ1 77 aa10.3□□□□□ -0.76
UBE3A-227ENST00000638011 ST20-AS1Q8NBB2 130 aa10.28□□□□□ -0.76
UBE3A-227ENST00000638011 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.76
UBE3A-227ENST00000638011 KCNQ1DNQ9H478 68 aa10.27□□□□□ -0.77
UBE3A-227ENST00000638011 C9orf129Q5T035 196 aaKnown RBP10.27□□□□□ -0.77
UBE3A-227ENST00000638011 LITAFQ99732 161 aa10.27□□□□□ -0.77
UBE3A-227ENST00000638011 TYMSOSQ8TAI1 123 aa10.27□□□□□ -0.77
UBE3A-227ENST00000638011 GCN1Q92616 2671 aaKnown RBP10.26□□□□□ -0.77
UBE3A-227ENST00000638011 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
UBE3A-227ENST00000638011 Q75L30 129 aa10.25□□□□□ -0.77
UBE3A-227ENST00000638011 Q96NJ1 140 aa10.25□□□□□ -0.77
UBE3A-227ENST00000638011 DMAC1Q96GE9 116 aa10.25□□□□□ -0.77
UBE3A-227ENST00000638011 FLNBO75369 2602 aaKnown RBP10.25□□□□□ -0.77
UBE3A-227ENST00000638011 FHL3Q13643 280 aa10.24□□□□□ -0.77
UBE3A-227ENST00000638011 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
UBE3A-227ENST00000638011 UNC79Q9P2D8 2635 aa10.24□□□□□ -0.77
UBE3A-227ENST00000638011 H3BS24 57 aa10.23□□□□□ -0.77
UBE3A-227ENST00000638011 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
UBE3A-227ENST00000638011 COL6A5A8TX70 2615 aa10.22□□□□□ -0.77
UBE3A-227ENST00000638011 C8orf17Q9NRJ1 99 aa10.2□□□□□ -0.78
UBE3A-227ENST00000638011 FAM104AQ969W3 186 aa10.2□□□□□ -0.78
UBE3A-227ENST00000638011 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
UBE3A-227ENST00000638011 KMT2BQ9UMN6 2715 aaPredicted RBP10.17□□□□□ -0.78
UBE3A-227ENST00000638011 DNAH10OSP0CZ25 163 aa10.16□□□□□ -0.78
UBE3A-227ENST00000638011 CSNK1G2-AS1Q8NCQ2 148 aa10.15□□□□□ -0.79
UBE3A-227ENST00000638011 WISP2O76076 250 aa10.14□□□□□ -0.79
UBE3A-227ENST00000638011 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
UBE3A-227ENST00000638011 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
UBE3A-227ENST00000638011 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
UBE3A-227ENST00000638011 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
UBE3A-227ENST00000638011 TEX15Q9BXT5 2789 aa10.11□□□□□ -0.79
UBE3A-227ENST00000638011 C15orf56Q8N910 161 aa10.09□□□□□ -0.79
UBE3A-227ENST00000638011 IGLV1-50A0A075B6I6 118 aa10.08□□□□□ -0.8
UBE3A-227ENST00000638011 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
UBE3A-227ENST00000638011 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
UBE3A-227ENST00000638011 OCR1Q9BZK8 76 aa10.07□□□□□ -0.8
UBE3A-227ENST00000638011 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
UBE3A-227ENST00000638011 COL4A2P08572 1712 aa10.05□□□□□ -0.8
UBE3A-227ENST00000638011 RTL8CO15255 209 aa10.04□□□□□ -0.8
UBE3A-227ENST00000638011 Q8N377 158 aa10.03□□□□□ -0.8
UBE3A-227ENST00000638011 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
UBE3A-227ENST00000638011 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.8
UBE3A-227ENST00000638011 KLK9Q2XQG4 91 aa10.01□□□□□ -0.81
UBE3A-227ENST00000638011 CDSNQ15517 529 aa10.01□□□□□ -0.81
UBE3A-227ENST00000638011 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
UBE3A-227ENST00000638011 ZNF861PO60384 105 aa10□□□□□ -0.81
UBE3A-227ENST00000638011 LINC00304Q8N9R0 145 aa9.99□□□□□ -0.81
UBE3A-227ENST00000638011 MAP1AP78559 2803 aaPredicted RBP9.99□□□□□ -0.81
UBE3A-227ENST00000638011 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
UBE3A-227ENST00000638011 A0A1B0GU33 70 aa9.98□□□□□ -0.81
UBE3A-227ENST00000638011 IGLV5-48A0A075B6I7 105 aa9.97□□□□□ -0.81
UBE3A-227ENST00000638011 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
UBE3A-227ENST00000638011 Q8NAQ8 132 aa9.96□□□□□ -0.82
UBE3A-227ENST00000638011 DSCR10P59022 87 aa9.94□□□□□ -0.82
UBE3A-227ENST00000638011 COX6B2Q6YFQ2 88 aa9.93□□□□□ -0.82
UBE3A-227ENST00000638011 SRCAPQ6ZRS2 3230 aa9.93□□□□□ -0.82
UBE3A-227ENST00000638011 UTP20O75691 2785 aaKnown RBP9.92□□□□□ -0.82
UBE3A-227ENST00000638011 SPRR4Q96PI1 79 aa9.92□□□□□ -0.82
UBE3A-227ENST00000638011 TNP2Q05952 138 aa9.92□□□□□ -0.82
UBE3A-227ENST00000638011 LINC01558Q9Y6Z2 57 aa9.91□□□□□ -0.82
UBE3A-227ENST00000638011 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
UBE3A-227ENST00000638011 LINC00588Q9Y4M8 146 aa9.91□□□□□ -0.82
UBE3A-227ENST00000638011 A0A0D9SG42 100 aa9.9□□□□□ -0.82
UBE3A-227ENST00000638011 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
UBE3A-227ENST00000638011 APCP25054 2843 aa9.89□□□□□ -0.83
UBE3A-227ENST00000638011 Q5XG85 94 aa9.88□□□□□ -0.83
UBE3A-227ENST00000638011 Q8N9P0 234 aaPredicted RBP9.87□□□□□ -0.83
UBE3A-227ENST00000638011 IGLV5-37A0A075B6J1 123 aa9.87□□□□□ -0.83
UBE3A-227ENST00000638011 CEP350Q5VT06 3117 aa9.86□□□□□ -0.83
UBE3A-227ENST00000638011 C10orf142B7Z368 130 aa9.85□□□□□ -0.83
UBE3A-227ENST00000638011 C9orf163Q8N9P6 203 aa9.85□□□□□ -0.83
UBE3A-227ENST00000638011 TEP1Q99973 2627 aaKnown RBP9.83□□□□□ -0.84
UBE3A-227ENST00000638011 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
UBE3A-227ENST00000638011 HRES1P13985 223 aa9.79□□□□□ -0.84
UBE3A-227ENST00000638011 CSAG1Q6PB30 78 aa9.79□□□□□ -0.84
UBE3A-227ENST00000638011 CNBPP62633 177 aaKnown RBP9.78□□□□□ -0.84
UBE3A-227ENST00000638011 Q5VV11 94 aa9.78□□□□□ -0.84
UBE3A-227ENST00000638011 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.84
UBE3A-227ENST00000638011 ZNF292O60281 2723 aa9.77□□□□□ -0.85
UBE3A-227ENST00000638011 KRTAP16-1A8MUX0 517 aa9.76□□□□□ -0.85
UBE3A-227ENST00000638011 A0A1W2PNM2 257 aa9.76□□□□□ -0.85
UBE3A-227ENST00000638011 PRR26Q8N8Z3 221 aa9.76□□□□□ -0.85
UBE3A-227ENST00000638011 ITPR1Q14643 2758 aa9.75□□□□□ -0.85
UBE3A-227ENST00000638011 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
UBE3A-227ENST00000638011 Q8N1X5 172 aa9.74□□□□□ -0.85
UBE3A-227ENST00000638011 PCNTO95613 3336 aa9.72□□□□□ -0.85
UBE3A-227ENST00000638011 SMR3AQ99954 134 aa9.71□□□□□ -0.85
UBE3A-227ENST00000638011 IGLV7-43P04211 117 aa9.71□□□□□ -0.86
UBE3A-227ENST00000638011 A0A1W2PPR1 153 aa9.7□□□□□ -0.86
UBE3A-227ENST00000638011 SPINK7P58062 85 aa9.7□□□□□ -0.86
UBE3A-227ENST00000638011 ROMO1P60602 79 aa9.69□□□□□ -0.86
UBE3A-227ENST00000638011 IGSF10Q6WRI0 2623 aa9.69□□□□□ -0.86
UBE3A-227ENST00000638011 LINC00612Q8N6U2 182 aa9.67□□□□□ -0.86
UBE3A-227ENST00000638011 FAM229BQ4G0N7 80 aa9.67□□□□□ -0.86
UBE3A-227ENST00000638011 SETXQ7Z333 2677 aaKnown RBP9.67□□□□□ -0.86
UBE3A-227ENST00000638011 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
UBE3A-227ENST00000638011 J3QL48 77 aa9.65□□□□□ -0.87
UBE3A-227ENST00000638011 EP400Q96L91 3159 aa9.64□□□□□ -0.87
UBE3A-227ENST00000638011 CFAP54Q96N23 3096 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms