RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 P0C880 135 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 ZNF22P17026 224 aaPredicted RBP1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 GNG4P50150 75 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 CTAG1AP78358 180 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 SPAG11BQ08648 103 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 JOSD1Q15040 202 aaPredicted RBP1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 C1orf137Q5JT78 98 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 TEX261Q6UWH6 196 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 SLC51BQ86UW2 128 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 COMMD7Q86VX2 200 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 SFT2D1Q8WV19 159 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 TMEM191AQ9H0A3 160 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 GNG13Q9P2W3 67 aa1.22□□□□□ -2.21
SMARCB1-208ENST00000634926 IGKV3OR2-268A0A0C4DH90 116 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 TRBV30A0A0K0K1B3 111 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 A0A1B0GV50 99 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 IFNA1P01562 189 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 TSPEAR-AS2P59090 65 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 RAB5BP61020 215 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 EIF5AP63241 154 aaKnown RBP1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 MRPS36P82909 103 aaKnown RBP1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 C1orf195Q5TG92 126 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 EIF5AL1Q6IS14 154 aaKnown RBP1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 UNQ6190/PRO20217Q6UXQ8 127 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 TSKUQ8WUA8 353 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 IMMP2LQ96T52 175 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 ST20Q9HBF5 79 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 TP73-AS1Q9UF72 201 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 USH2AO75445 5202 aa1.21□□□□□ -2.22
SMARCB1-208ENST00000634926 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 TRAV13-1A0A0B4J241 112 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 A0A1B0GUT8 65 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 A0A1W2PNM2 257 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 HIGD1CA8MV81 97 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 NDUFA1O15239 70 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 NUPR1O60356 82 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 BCE1O60756 84 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 UBE2D1P51668 147 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 CEBPGP53567 150 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 RPL39P62891 51 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 MT1HP80294 61 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 BATFQ16520 125 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 ASB16-AS1Q495Z4 193 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 FAM229BQ4G0N7 80 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 C2orf82Q6UX34 121 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 C5orf38Q86SI9 138 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 DPH3Q96FX2 82 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 AMELXQ99217 191 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 C20orf78Q9BR46 151 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 SMIM2Q9BVW6 85 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 BIN3Q9NQY0 253 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 SPANXA1Q9NS26 97 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 V9GYV3 84 aa1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
SMARCB1-208ENST00000634926 KANTRA0A1W2PQU2 76 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 SMIM27A0A1W2PRY6 76 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 PPP1R17O96001 155 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 Q8IZM0 81 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 TCTE3Q8IZS6 198 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 Q8NDZ9 215 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 BTF3L4Q96K17 158 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 RETNLBQ9BQ08 111 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 OSTCQ9NRP0 149 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 MED9Q9NWA0 146 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 C22orf24Q9Y442 160 aa1.19□□□□□ -2.22
SMARCB1-208ENST00000634926 IGIPA6NJ69 53 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 ZNF727A8MUV8 499 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 D6R8Y8 96 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 F8VRH5 84 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 NPYP01303 97 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 IGKV4-1P06312 121 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 CRYGAP11844 174 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 LGALS3P17931 250 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 RPL28P46779 137 aaKnown RBP1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 HBBP68871 147 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 FP248Q71RG6 208 aaPredicted RBP1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 SMIM15Q7Z3B0 74 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 SMIM7Q9BQ49 75 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 BATF3Q9NR55 127 aa1.18□□□□□ -2.22
SMARCB1-208ENST00000634926 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 TGIF2-C20orf24A0A0A6YYL0 155 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 A0A1B0GW54 56 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 LINC01546A6NGU7 62 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 M0R378 163 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 PPBPP02775 128 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 SRP19P09132 144 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 FCER1GP30273 86 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 SPRR1AP35321 89 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 UBE2BP63146 152 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 PLEKHB2Q96CS7 222 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 TMEM141Q96I45 108 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 TMEM126AQ9H061 195 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 XAGE1AQ9HD64 81 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 CDKN2A-AS1Q9UH64 79 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 NAT8BQ9UHF3 227 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 LAMTOR2Q9Y2Q5 125 aa1.17□□□□□ -2.22
SMARCB1-208ENST00000634926 H3BPC8 53 aa1.16□□□□□ -2.22
SMARCB1-208ENST00000634926 K7EMI3 77 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms