RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
PNKP-224ENST00000631020 LITAFQ99732 161 aa11.68□□□□□ -0.54
PNKP-224ENST00000631020 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
PNKP-224ENST00000631020 FAM19A5Q7Z5A7 132 aaPredicted RBP11.67□□□□□ -0.54
PNKP-224ENST00000631020 RPL37AP61513 92 aaKnown RBP11.66□□□□□ -0.54
PNKP-224ENST00000631020 Q8NDZ9 215 aa11.65□□□□□ -0.54
PNKP-224ENST00000631020 Q1RN00 199 aa11.65□□□□□ -0.55
PNKP-224ENST00000631020 PLA2G2DQ9UNK4 145 aa11.64□□□□□ -0.55
PNKP-224ENST00000631020 EIF4EBP3O60516 100 aaPredicted RBP11.63□□□□□ -0.55
PNKP-224ENST00000631020 OXTP01178 125 aa11.63□□□□□ -0.55
PNKP-224ENST00000631020 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
PNKP-224ENST00000631020 PRO0461Q9UI25 63 aa11.63□□□□□ -0.55
PNKP-224ENST00000631020 PCP4P48539 62 aa11.62□□□□□ -0.55
PNKP-224ENST00000631020 VPREB1P12018 145 aa11.61□□□□□ -0.55
PNKP-224ENST00000631020 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
PNKP-224ENST00000631020 C22orf24Q9Y442 160 aa11.61□□□□□ -0.55
PNKP-224ENST00000631020 M0QXV9 152 aa11.6□□□□□ -0.55
PNKP-224ENST00000631020 IGLV5-37A0A075B6J1 123 aa11.6□□□□□ -0.55
PNKP-224ENST00000631020 COX6CP09669 75 aa11.6□□□□□ -0.55
PNKP-224ENST00000631020 NPC2P61916 151 aa11.6□□□□□ -0.55
PNKP-224ENST00000631020 ETDBQ3ZM63 59 aa11.6□□□□□ -0.55
PNKP-224ENST00000631020 TCL1BO95988 128 aa11.59□□□□□ -0.55
PNKP-224ENST00000631020 ATXN8Q156A1 80 aa11.59□□□□□ -0.55
PNKP-224ENST00000631020 KRTAP11-1Q8IUC1 163 aa11.59□□□□□ -0.55
PNKP-224ENST00000631020 LRP1Q07954 4544 aaKnown RBP11.59□□□□□ -0.55
PNKP-224ENST00000631020 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
PNKP-224ENST00000631020 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
PNKP-224ENST00000631020 PKHD1L1Q86WI1 4243 aa11.58□□□□□ -0.56
PNKP-224ENST00000631020 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
PNKP-224ENST00000631020 H7C2G1 150 aa11.55□□□□□ -0.56
PNKP-224ENST00000631020 MRPL55Q7Z7F7 128 aaKnown RBP11.55□□□□□ -0.56
PNKP-224ENST00000631020 NKAPP1Q8N9T2 125 aa11.55□□□□□ -0.56
PNKP-224ENST00000631020 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
PNKP-224ENST00000631020 LINC00167Q96N53 147 aa11.55□□□□□ -0.56
PNKP-224ENST00000631020 FAT3Q8TDW7 4589 aa11.54□□□□□ -0.56
PNKP-224ENST00000631020 TEN1Q86WV5 123 aa11.54□□□□□ -0.56
PNKP-224ENST00000631020 MTURNQ8N3F0 131 aa11.54□□□□□ -0.56
PNKP-224ENST00000631020 PPDPFLQ8WWR9 84 aa11.54□□□□□ -0.56
PNKP-224ENST00000631020 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
PNKP-224ENST00000631020 NCR3O14931 201 aa11.51□□□□□ -0.57
PNKP-224ENST00000631020 SLC25A20O43772 301 aa11.5□□□□□ -0.57
PNKP-224ENST00000631020 NDUFC2O95298 119 aa11.5□□□□□ -0.57
PNKP-224ENST00000631020 RPL13AP40429 203 aaKnown RBP11.5□□□□□ -0.57
PNKP-224ENST00000631020 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
PNKP-224ENST00000631020 UBE2BP63146 152 aa11.5□□□□□ -0.57
PNKP-224ENST00000631020 M0R378 163 aa11.5□□□□□ -0.57
PNKP-224ENST00000631020 TRIAP1O43715 76 aa11.5□□□□□ -0.57
PNKP-224ENST00000631020 PSORS1C2Q9UIG4 136 aa11.5□□□□□ -0.57
PNKP-224ENST00000631020 C9JAW5 83 aa11.49□□□□□ -0.57
PNKP-224ENST00000631020 SIGMAR1Q99720 223 aa11.48□□□□□ -0.57
PNKP-224ENST00000631020 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
PNKP-224ENST00000631020 LINC01600Q96MT4 127 aa11.47□□□□□ -0.57
PNKP-224ENST00000631020 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.57
PNKP-224ENST00000631020 TRBV10-2A0A0K0K1G8 114 aa11.46□□□□□ -0.57
PNKP-224ENST00000631020 IGKV2D-28P01615 120 aa11.46□□□□□ -0.57
PNKP-224ENST00000631020 ANKRD29Q8N6D5 301 aa11.46□□□□□ -0.57
PNKP-224ENST00000631020 SCGB1A1P11684 91 aa11.45□□□□□ -0.58
PNKP-224ENST00000631020 H3BT86 120 aa11.45□□□□□ -0.58
PNKP-224ENST00000631020 C21orf62-AS1Q17RA5 79 aa11.44□□□□□ -0.58
PNKP-224ENST00000631020 TRAV13-2A0A0B4J235 113 aa11.43□□□□□ -0.58
PNKP-224ENST00000631020 TRBV10-3A0A0K0K1G6 114 aa11.43□□□□□ -0.58
PNKP-224ENST00000631020 C1orf137Q5JT78 98 aa11.43□□□□□ -0.58
PNKP-224ENST00000631020 LST1O00453 97 aa11.41□□□□□ -0.58
PNKP-224ENST00000631020 LINC00337Q8N6G1 96 aa11.41□□□□□ -0.58
PNKP-224ENST00000631020 IGLV6-57P01721 117 aa11.4□□□□□ -0.58
PNKP-224ENST00000631020 KCNQ1DNQ9H478 68 aa11.4□□□□□ -0.59
PNKP-224ENST00000631020 MT1HL1P0DM35 61 aa11.39□□□□□ -0.59
PNKP-224ENST00000631020 S100A7L2Q5SY68 101 aa11.39□□□□□ -0.59
PNKP-224ENST00000631020 TMEM126AQ9H061 195 aa11.39□□□□□ -0.59
PNKP-224ENST00000631020 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
PNKP-224ENST00000631020 REG3GQ6UW15 175 aa11.37□□□□□ -0.59
PNKP-224ENST00000631020 BCE1O60756 84 aa11.36□□□□□ -0.59
PNKP-224ENST00000631020 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
PNKP-224ENST00000631020 CLEC2BQ92478 149 aa11.35□□□□□ -0.59
PNKP-224ENST00000631020 PRYO14603 147 aa11.35□□□□□ -0.59
PNKP-224ENST00000631020 SPINK6Q6UWN8 80 aa11.35□□□□□ -0.59
PNKP-224ENST00000631020 SPRR1AP35321 89 aa11.34□□□□□ -0.59
PNKP-224ENST00000631020 HMCN2Q8NDA2 5059 aa11.33□□□□□ -0.6
PNKP-224ENST00000631020 KRTAP4-16G5E9R7 235 aaPredicted RBP11.33□□□□□ -0.6
PNKP-224ENST00000631020 TRACP01848 142 aa11.33□□□□□ -0.6
PNKP-224ENST00000631020 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
PNKP-224ENST00000631020 KRTAP13-1Q8IUC0 172 aa11.32□□□□□ -0.6
PNKP-224ENST00000631020 TRAV23DV6A0A075B6W5 121 aa11.31□□□□□ -0.6
PNKP-224ENST00000631020 ZNF861PO60384 105 aa11.3□□□□□ -0.6
PNKP-224ENST00000631020 FAM19A1Q7Z5A9 133 aa11.3□□□□□ -0.6
PNKP-224ENST00000631020 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
PNKP-224ENST00000631020 PRLHP81277 87 aa11.3□□□□□ -0.6
PNKP-224ENST00000631020 TNXBP22105 4242 aa11.28□□□□□ -0.6
PNKP-224ENST00000631020 H0YGX0 51 aa11.28□□□□□ -0.6
PNKP-224ENST00000631020 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
PNKP-224ENST00000631020 UBE2AP49459 152 aa11.28□□□□□ -0.6
PNKP-224ENST00000631020 TEX49A0A1B0GTD5 131 aa11.25□□□□□ -0.61
PNKP-224ENST00000631020 ETDCA0A1B0GVM5 59 aa11.25□□□□□ -0.61
PNKP-224ENST00000631020 B5MCH6 92 aa11.25□□□□□ -0.61
PNKP-224ENST00000631020 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
PNKP-224ENST00000631020 H0Y9J4 135 aa11.25□□□□□ -0.61
PNKP-224ENST00000631020 SMIM11BQ8TCY0 68 aa11.25□□□□□ -0.61
PNKP-224ENST00000631020 DNAL4O96015 105 aa11.24□□□□□ -0.61
PNKP-224ENST00000631020 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
PNKP-224ENST00000631020 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms