RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
SYNGAP1-208ENST00000629380 IGLV6-57P01721 117 aa8.99□□□□□ -0.97
SYNGAP1-208ENST00000629380 EP400Q96L91 3159 aa8.99□□□□□ -0.97
SYNGAP1-208ENST00000629380 LINC00315P59091 139 aa8.99□□□□□ -0.97
SYNGAP1-208ENST00000629380 FAM218AQ96MZ4 157 aa8.99□□□□□ -0.97
SYNGAP1-208ENST00000629380 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
SYNGAP1-208ENST00000629380 KRTAP24-1Q3LI83 254 aa8.98□□□□□ -0.97
SYNGAP1-208ENST00000629380 DNAH10OSP0CZ25 163 aa8.97□□□□□ -0.97
SYNGAP1-208ENST00000629380 LINC00304Q8N9R0 145 aa8.97□□□□□ -0.97
SYNGAP1-208ENST00000629380 CENPFP49454 3210 aa8.97□□□□□ -0.97
SYNGAP1-208ENST00000629380 LUZP6Q538Z0 58 aa8.97□□□□□ -0.97
SYNGAP1-208ENST00000629380 STAB2Q8WWQ8 2551 aa8.96□□□□□ -0.97
SYNGAP1-208ENST00000629380 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.97
SYNGAP1-208ENST00000629380 CDC42SE1Q9NRR8 79 aa8.96□□□□□ -0.98
SYNGAP1-208ENST00000629380 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
SYNGAP1-208ENST00000629380 BAHCC1Q9P281 2608 aa8.93□□□□□ -0.98
SYNGAP1-208ENST00000629380 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
SYNGAP1-208ENST00000629380 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
SYNGAP1-208ENST00000629380 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
SYNGAP1-208ENST00000629380 CD164Q04900 197 aa8.9□□□□□ -0.98
SYNGAP1-208ENST00000629380 TEP1Q99973 2627 aaKnown RBP8.9□□□□□ -0.98
SYNGAP1-208ENST00000629380 K7EQZ3 153 aa8.89□□□□□ -0.99
SYNGAP1-208ENST00000629380 A0A1B0GVX0 72 aa8.89□□□□□ -0.99
SYNGAP1-208ENST00000629380 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
SYNGAP1-208ENST00000629380 KLK9Q2XQG4 91 aa8.89□□□□□ -0.99
SYNGAP1-208ENST00000629380 PRR15Q8IV56 129 aa8.89□□□□□ -0.99
SYNGAP1-208ENST00000629380 OBSCN-AS1Q96MR7 158 aa8.89□□□□□ -0.99
SYNGAP1-208ENST00000629380 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
SYNGAP1-208ENST00000629380 KCNQ1DNQ9H478 68 aa8.88□□□□□ -0.99
SYNGAP1-208ENST00000629380 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
SYNGAP1-208ENST00000629380 Q8NAQ8 132 aa8.87□□□□□ -0.99
SYNGAP1-208ENST00000629380 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-208ENST00000629380 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
SYNGAP1-208ENST00000629380 LINC01554Q52M75 96 aa8.84□□□□□ -0.99
SYNGAP1-208ENST00000629380 C8orf17Q9NRJ1 99 aa8.84□□□□□ -0.99
SYNGAP1-208ENST00000629380 FAM168BA1KXE4 195 aa8.84□□□□□ -1
SYNGAP1-208ENST00000629380 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
SYNGAP1-208ENST00000629380 A8MUN3 132 aa8.81□□□□□ -1
SYNGAP1-208ENST00000629380 ITPR2Q14571 2701 aa8.81□□□□□ -1
SYNGAP1-208ENST00000629380 DSCR10P59022 87 aa8.8□□□□□ -1
SYNGAP1-208ENST00000629380 IGFL1Q6UW32 110 aa8.79□□□□□ -1
SYNGAP1-208ENST00000629380 LCA10Q71F78 164 aa8.79□□□□□ -1
SYNGAP1-208ENST00000629380 ZNF861PO60384 105 aa8.79□□□□□ -1
SYNGAP1-208ENST00000629380 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
SYNGAP1-208ENST00000629380 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
SYNGAP1-208ENST00000629380 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
SYNGAP1-208ENST00000629380 Q1T7F1 81 aa8.77□□□□□ -1.01
SYNGAP1-208ENST00000629380 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
SYNGAP1-208ENST00000629380 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
SYNGAP1-208ENST00000629380 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
SYNGAP1-208ENST00000629380 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SYNGAP1-208ENST00000629380 A0A0D9SG42 100 aa8.73□□□□□ -1.01
SYNGAP1-208ENST00000629380 LITAFQ99732 161 aa8.73□□□□□ -1.01
SYNGAP1-208ENST00000629380 C15orf56Q8N910 161 aa8.71□□□□□ -1.01
SYNGAP1-208ENST00000629380 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.01
SYNGAP1-208ENST00000629380 TLX1NBP0CAT3 122 aa8.69□□□□□ -1.02
SYNGAP1-208ENST00000629380 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
SYNGAP1-208ENST00000629380 ZNF292O60281 2723 aa8.68□□□□□ -1.02
SYNGAP1-208ENST00000629380 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
SYNGAP1-208ENST00000629380 H7BZZ5 65 aa8.66□□□□□ -1.02
SYNGAP1-208ENST00000629380 MAP1AP78559 2803 aaPredicted RBP8.65□□□□□ -1.02
SYNGAP1-208ENST00000629380 K7EIL1 84 aa8.65□□□□□ -1.03
SYNGAP1-208ENST00000629380 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
SYNGAP1-208ENST00000629380 C9orf163Q8N9P6 203 aa8.63□□□□□ -1.03
SYNGAP1-208ENST00000629380 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
SYNGAP1-208ENST00000629380 HRES1P13985 223 aa8.62□□□□□ -1.03
SYNGAP1-208ENST00000629380 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
SYNGAP1-208ENST00000629380 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
SYNGAP1-208ENST00000629380 CAMK2N1Q7Z7J9 78 aa8.61□□□□□ -1.03
SYNGAP1-208ENST00000629380 Q8N377 158 aa8.6□□□□□ -1.03
SYNGAP1-208ENST00000629380 CNBPP62633 177 aaKnown RBP8.6□□□□□ -1.03
SYNGAP1-208ENST00000629380 A0A087WTM6 91 aa8.6□□□□□ -1.03
SYNGAP1-208ENST00000629380 A0A096LNT2 108 aa8.6□□□□□ -1.03
SYNGAP1-208ENST00000629380 Q8N1X5 172 aa8.6□□□□□ -1.03
SYNGAP1-208ENST00000629380 A0A0A0MQY5 61 aa8.58□□□□□ -1.04
SYNGAP1-208ENST00000629380 KRTAP10-11P60412 298 aa8.58□□□□□ -1.04
SYNGAP1-208ENST00000629380 APCP25054 2843 aa8.57□□□□□ -1.04
SYNGAP1-208ENST00000629380 Q6ZSA8 131 aa8.55□□□□□ -1.04
SYNGAP1-208ENST00000629380 A0A1B0GU33 70 aa8.54□□□□□ -1.04
SYNGAP1-208ENST00000629380 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
SYNGAP1-208ENST00000629380 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
SYNGAP1-208ENST00000629380 Q75L30 129 aa8.52□□□□□ -1.05
SYNGAP1-208ENST00000629380 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
SYNGAP1-208ENST00000629380 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
SYNGAP1-208ENST00000629380 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
SYNGAP1-208ENST00000629380 NSD1Q96L73 2696 aaPredicted RBP8.49□□□□□ -1.05
SYNGAP1-208ENST00000629380 M0R2T5 61 aa8.49□□□□□ -1.05
SYNGAP1-208ENST00000629380 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
SYNGAP1-208ENST00000629380 PRR26Q8N8Z3 221 aa8.47□□□□□ -1.05
SYNGAP1-208ENST00000629380 S4R3F8 94 aa8.46□□□□□ -1.05
SYNGAP1-208ENST00000629380 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.06
SYNGAP1-208ENST00000629380 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
SYNGAP1-208ENST00000629380 KRTAP1-3Q8IUG1 177 aa8.44□□□□□ -1.06
SYNGAP1-208ENST00000629380 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SYNGAP1-208ENST00000629380 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
SYNGAP1-208ENST00000629380 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
SYNGAP1-208ENST00000629380 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
SYNGAP1-208ENST00000629380 WIPF1O43516 503 aa8.39□□□□□ -1.07
SYNGAP1-208ENST00000629380 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
SYNGAP1-208ENST00000629380 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms