RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
PMS1-221ENST00000624204 CAMK2N2Q96S95 79 aa10.11□□□□□ -0.79
PMS1-221ENST00000624204 ITPR2Q14571 2701 aa10.11□□□□□ -0.79
PMS1-221ENST00000624204 LINC00612Q8N6U2 182 aa10.1□□□□□ -0.79
PMS1-221ENST00000624204 RPL37AP8A6NKH3 93 aa10.08□□□□□ -0.8
PMS1-221ENST00000624204 C1orf64Q8NEQ6 169 aa10.08□□□□□ -0.8
PMS1-221ENST00000624204 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
PMS1-221ENST00000624204 FASNP49327 2511 aaKnown RBP10.08□□□□□ -0.8
PMS1-221ENST00000624204 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
PMS1-221ENST00000624204 X6R8D5 127 aa10.07□□□□□ -0.8
PMS1-221ENST00000624204 Q6ZRP5 223 aa10.07□□□□□ -0.8
PMS1-221ENST00000624204 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
PMS1-221ENST00000624204 VPREB1P12018 145 aa10.05□□□□□ -0.8
PMS1-221ENST00000624204 A8MU10 97 aa10.04□□□□□ -0.8
PMS1-221ENST00000624204 M0R378 163 aa10.04□□□□□ -0.8
PMS1-221ENST00000624204 HECTD1Q9ULT8 2610 aa10.03□□□□□ -0.8
PMS1-221ENST00000624204 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
PMS1-221ENST00000624204 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
PMS1-221ENST00000624204 PRR15Q8IV56 129 aa10.02□□□□□ -0.81
PMS1-221ENST00000624204 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
PMS1-221ENST00000624204 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
PMS1-221ENST00000624204 GVQW2A0A096LPI5 108 aaPredicted RBP10.01□□□□□ -0.81
PMS1-221ENST00000624204 Q6ZRU5 148 aa10□□□□□ -0.81
PMS1-221ENST00000624204 WFDC10BQ8IUB3 73 aa10□□□□□ -0.81
PMS1-221ENST00000624204 TRAV22A0A0B4J277 110 aa10□□□□□ -0.81
PMS1-221ENST00000624204 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
PMS1-221ENST00000624204 LELP1Q5T871 98 aa9.99□□□□□ -0.81
PMS1-221ENST00000624204 NKAPP1Q8N9T2 125 aa9.99□□□□□ -0.81
PMS1-221ENST00000624204 Q1T7F1 81 aa9.98□□□□□ -0.81
PMS1-221ENST00000624204 Q8N377 158 aa9.98□□□□□ -0.81
PMS1-221ENST00000624204 ST20-AS1Q8NBB2 130 aa9.98□□□□□ -0.81
PMS1-221ENST00000624204 NOTCH1P46531 2555 aa9.98□□□□□ -0.81
PMS1-221ENST00000624204 IGKV2D-24A0A075B6R9 120 aa9.98□□□□□ -0.81
PMS1-221ENST00000624204 A8MUN3 132 aa9.98□□□□□ -0.81
PMS1-221ENST00000624204 ETDCA0A1B0GVM5 59 aa9.97□□□□□ -0.81
PMS1-221ENST00000624204 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
PMS1-221ENST00000624204 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.81
PMS1-221ENST00000624204 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.96□□□□□ -0.82
PMS1-221ENST00000624204 SRRM2Q9UQ35 2752 aaKnown RBP9.95□□□□□ -0.82
PMS1-221ENST00000624204 A0A1W2PNM2 257 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 K7EQZ3 153 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 EGFEM1PQ0D2K5 195 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 C1orf137Q5JT78 98 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 COL6A5A8TX70 2615 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 MAST4O15021 2626 aa9.95□□□□□ -0.82
PMS1-221ENST00000624204 RETNQ9HD89 108 aa9.94□□□□□ -0.82
PMS1-221ENST00000624204 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
PMS1-221ENST00000624204 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
PMS1-221ENST00000624204 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
PMS1-221ENST00000624204 UBE2BP63146 152 aa9.92□□□□□ -0.82
PMS1-221ENST00000624204 A0A096LNI7 61 aa9.92□□□□□ -0.82
PMS1-221ENST00000624204 IGLV5-48A0A075B6I7 105 aa9.91□□□□□ -0.82
PMS1-221ENST00000624204 DSCR10P59022 87 aa9.9□□□□□ -0.82
PMS1-221ENST00000624204 SMR3AQ99954 134 aa9.9□□□□□ -0.82
PMS1-221ENST00000624204 FAM168BA1KXE4 195 aa9.9□□□□□ -0.82
PMS1-221ENST00000624204 ZCCHC13Q8WW36 166 aaKnown RBP9.89□□□□□ -0.83
PMS1-221ENST00000624204 LINC00208Q96KT6 92 aa9.89□□□□□ -0.83
PMS1-221ENST00000624204 CHKB-CPT1BH3BT56 60 aa9.89□□□□□ -0.83
PMS1-221ENST00000624204 PSCAO43653 123 aa9.89□□□□□ -0.83
PMS1-221ENST00000624204 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
PMS1-221ENST00000624204 LCE6AA0A183 80 aa9.88□□□□□ -0.83
PMS1-221ENST00000624204 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
PMS1-221ENST00000624204 FBN1P35555 2871 aaKnown RBP9.88□□□□□ -0.83
PMS1-221ENST00000624204 CSMD3Q7Z407 3707 aa9.88□□□□□ -0.83
PMS1-221ENST00000624204 C7orf33Q8WU49 177 aa9.88□□□□□ -0.83
PMS1-221ENST00000624204 Q8NBF4 154 aa9.88□□□□□ -0.83
PMS1-221ENST00000624204 SPART-AS1P0CW21 52 aa9.86□□□□□ -0.83
PMS1-221ENST00000624204 HCG22E2RYF7 251 aa9.86□□□□□ -0.83
PMS1-221ENST00000624204 C15orf56Q8N910 161 aa9.86□□□□□ -0.83
PMS1-221ENST00000624204 SYCNQ0VAF6 134 aa9.85□□□□□ -0.83
PMS1-221ENST00000624204 TENM3Q9P273 2699 aa9.85□□□□□ -0.83
PMS1-221ENST00000624204 MP68P56378 58 aa9.84□□□□□ -0.83
PMS1-221ENST00000624204 KCNQ1DNQ9H478 68 aa9.84□□□□□ -0.83
PMS1-221ENST00000624204 PRR15LQ9BU68 103 aa9.83□□□□□ -0.84
PMS1-221ENST00000624204 CYP4F30PQ9H0H9 118 aa9.83□□□□□ -0.84
PMS1-221ENST00000624204 Q9BRP9 147 aa9.83□□□□□ -0.84
PMS1-221ENST00000624204 DHRS4-AS1Q9P1J3 65 aa9.82□□□□□ -0.84
PMS1-221ENST00000624204 NDUFB1O75438 58 aa9.82□□□□□ -0.84
PMS1-221ENST00000624204 Q6ZRX8 168 aa9.82□□□□□ -0.84
PMS1-221ENST00000624204 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
PMS1-221ENST00000624204 Q8NAQ8 132 aa9.82□□□□□ -0.84
PMS1-221ENST00000624204 APOC4P55056 127 aa9.81□□□□□ -0.84
PMS1-221ENST00000624204 Q5VV11 94 aa9.81□□□□□ -0.84
PMS1-221ENST00000624204 NSD1Q96L73 2696 aaPredicted RBP9.79□□□□□ -0.84
PMS1-221ENST00000624204 A0A087WSZ3 146 aa9.79□□□□□ -0.84
PMS1-221ENST00000624204 A0A1B0GW54 56 aa9.79□□□□□ -0.84
PMS1-221ENST00000624204 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
PMS1-221ENST00000624204 IGKV2-24A0A0C4DH68 120 aa9.78□□□□□ -0.84
PMS1-221ENST00000624204 CD164Q04900 197 aa9.78□□□□□ -0.84
PMS1-221ENST00000624204 TNP2Q05952 138 aa9.78□□□□□ -0.84
PMS1-221ENST00000624204 SPRR4Q96PI1 79 aa9.77□□□□□ -0.85
PMS1-221ENST00000624204 COL7A1Q02388 2944 aa9.77□□□□□ -0.85
PMS1-221ENST00000624204 OTOGQ6ZRI0 2925 aa9.77□□□□□ -0.85
PMS1-221ENST00000624204 A6NED7 52 aa9.77□□□□□ -0.85
PMS1-221ENST00000624204 KRTAP10-3P60369 221 aa9.77□□□□□ -0.85
PMS1-221ENST00000624204 KRTAP26-1Q6PEX3 210 aa9.77□□□□□ -0.85
PMS1-221ENST00000624204 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
PMS1-221ENST00000624204 PCOTHQ58A44 107 aa9.76□□□□□ -0.85
PMS1-221ENST00000624204 STAB1Q9NY15 2570 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms