RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 PPDPFQ9H3Y8 114 aa12.58□□□□□ -0.4
PMPCA-212ENST00000622209 KRTAP4-16G5E9R7 235 aaPredicted RBP12.56□□□□□ -0.4
PMPCA-212ENST00000622209 ETDCA0A1B0GVM5 59 aa12.55□□□□□ -0.4
PMPCA-212ENST00000622209 LINC00518Q8N0U6 118 aa12.55□□□□□ -0.4
PMPCA-212ENST00000622209 CBY1Q9Y3M2 126 aa12.55□□□□□ -0.4
PMPCA-212ENST00000622209 RPL13AP40429 203 aaKnown RBP12.53□□□□□ -0.4
PMPCA-212ENST00000622209 JOSD1Q15040 202 aaPredicted RBP12.52□□□□□ -0.41
PMPCA-212ENST00000622209 HIGD2AQ9BW72 106 aa12.52□□□□□ -0.41
PMPCA-212ENST00000622209 TRAV23DV6A0A075B6W5 121 aa12.51□□□□□ -0.41
PMPCA-212ENST00000622209 MUSTN1Q8IVN3 82 aa12.51□□□□□ -0.41
PMPCA-212ENST00000622209 OR13C6PQ8NH95 151 aa12.5□□□□□ -0.41
PMPCA-212ENST00000622209 B5MCH6 92 aa12.49□□□□□ -0.41
PMPCA-212ENST00000622209 TMA7Q9Y2S6 64 aaKnown RBP12.49□□□□□ -0.41
PMPCA-212ENST00000622209 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
PMPCA-212ENST00000622209 COX8AP10176 69 aa12.48□□□□□ -0.41
PMPCA-212ENST00000622209 CRYGAP11844 174 aa12.47□□□□□ -0.41
PMPCA-212ENST00000622209 FAM229BQ4G0N7 80 aa12.47□□□□□ -0.41
PMPCA-212ENST00000622209 DLEU1O43261 78 aa12.46□□□□□ -0.41
PMPCA-212ENST00000622209 SMCR5Q8TEV8 140 aa12.46□□□□□ -0.41
PMPCA-212ENST00000622209 HINT1P49773 126 aaPredicted RBP12.45□□□□□ -0.42
PMPCA-212ENST00000622209 PRR4Q16378 134 aa12.45□□□□□ -0.42
PMPCA-212ENST00000622209 Q6ZRX8 168 aa12.45□□□□□ -0.42
PMPCA-212ENST00000622209 VAMP8Q9BV40 100 aa12.45□□□□□ -0.42
PMPCA-212ENST00000622209 ZNF706Q9Y5V0 76 aaPredicted RBP12.45□□□□□ -0.42
PMPCA-212ENST00000622209 A0A087X002 238 aa12.44□□□□□ -0.42
PMPCA-212ENST00000622209 SPATA45Q537H7 98 aa12.44□□□□□ -0.42
PMPCA-212ENST00000622209 ANAPC11Q9NYG5 84 aa12.44□□□□□ -0.42
PMPCA-212ENST00000622209 PAM16Q9Y3D7 125 aa12.44□□□□□ -0.42
PMPCA-212ENST00000622209 SPRR4Q96PI1 79 aa12.42□□□□□ -0.42
PMPCA-212ENST00000622209 TYMSOSQ8TAI1 123 aa12.4□□□□□ -0.42
PMPCA-212ENST00000622209 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
PMPCA-212ENST00000622209 Q9BRP9 147 aa12.4□□□□□ -0.42
PMPCA-212ENST00000622209 TRAV13-2A0A0B4J235 113 aa12.39□□□□□ -0.43
PMPCA-212ENST00000622209 A6NDN8 102 aa12.39□□□□□ -0.43
PMPCA-212ENST00000622209 TSPAN13O95857 204 aa12.38□□□□□ -0.43
PMPCA-212ENST00000622209 KRTAP13-2Q52LG2 175 aa12.38□□□□□ -0.43
PMPCA-212ENST00000622209 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
PMPCA-212ENST00000622209 SLC25A34Q6PIV7 304 aa12.37□□□□□ -0.43
PMPCA-212ENST00000622209 HIST1H4GQ99525 98 aa12.37□□□□□ -0.43
PMPCA-212ENST00000622209 MUC2Q02817 5179 aa12.36□□□□□ -0.43
PMPCA-212ENST00000622209 ERC2-IT1O76042 136 aa12.36□□□□□ -0.43
PMPCA-212ENST00000622209 A4D1N5 150 aa12.35□□□□□ -0.43
PMPCA-212ENST00000622209 C6orf99Q4VX62 202 aa12.35□□□□□ -0.43
PMPCA-212ENST00000622209 HIGD1BQ9P298 99 aa12.35□□□□□ -0.43
PMPCA-212ENST00000622209 TRBV7-6A0A0J9YX20 115 aa12.34□□□□□ -0.43
PMPCA-212ENST00000622209 LINC00483Q53H64 154 aa12.34□□□□□ -0.43
PMPCA-212ENST00000622209 COX7BP24311 80 aa12.33□□□□□ -0.44
PMPCA-212ENST00000622209 ELOF1P60002 83 aaKnown RBP12.33□□□□□ -0.44
PMPCA-212ENST00000622209 DHRS4-AS1Q9P1J3 65 aa12.33□□□□□ -0.44
PMPCA-212ENST00000622209 GAGE2AQ6NT46 116 aa12.3□□□□□ -0.44
PMPCA-212ENST00000622209 A0A1B0GWB2 263 aa12.29□□□□□ -0.44
PMPCA-212ENST00000622209 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
PMPCA-212ENST00000622209 C2orf91Q6ZV80 131 aa12.28□□□□□ -0.44
PMPCA-212ENST00000622209 SMIM11BQ8TCY0 68 aa12.28□□□□□ -0.44
PMPCA-212ENST00000622209 TAL2Q16559 108 aa12.26□□□□□ -0.45
PMPCA-212ENST00000622209 LINC00304Q8N9R0 145 aa12.25□□□□□ -0.45
PMPCA-212ENST00000622209 ST20-AS1Q8NBB2 130 aa12.24□□□□□ -0.45
PMPCA-212ENST00000622209 CTAG1AP78358 180 aa12.23□□□□□ -0.45
PMPCA-212ENST00000622209 VAMP3Q15836 100 aa12.22□□□□□ -0.45
PMPCA-212ENST00000622209 C12orf57Q99622 126 aa12.22□□□□□ -0.45
PMPCA-212ENST00000622209 CFC1BP0CG36 223 aa12.2□□□□□ -0.46
PMPCA-212ENST00000622209 CFC1P0CG37 223 aa12.2□□□□□ -0.46
PMPCA-212ENST00000622209 CEND1Q8N111 149 aa12.2□□□□□ -0.46
PMPCA-212ENST00000622209 SPRR1BP22528 89 aa12.19□□□□□ -0.46
PMPCA-212ENST00000622209 SPAG11AQ6PDA7 123 aa12.19□□□□□ -0.46
PMPCA-212ENST00000622209 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
PMPCA-212ENST00000622209 SSBP3-AS1Q7Z2R9 100 aa12.18□□□□□ -0.46
PMPCA-212ENST00000622209 RAB37Q96AX2 223 aa12.18□□□□□ -0.46
PMPCA-212ENST00000622209 IGLV9-49A0A0B4J1Y8 123 aa12.17□□□□□ -0.46
PMPCA-212ENST00000622209 A0A0B4J2C4 111 aa12.17□□□□□ -0.46
PMPCA-212ENST00000622209 TMEM238LA0A1B0GVL6 79 aa12.16□□□□□ -0.46
PMPCA-212ENST00000622209 A6NJY4 79 aa12.16□□□□□ -0.46
PMPCA-212ENST00000622209 C4orf48Q5BLP8 95 aa12.16□□□□□ -0.46
PMPCA-212ENST00000622209 Q8NBF4 154 aa12.16□□□□□ -0.46
PMPCA-212ENST00000622209 RETNLBQ9BQ08 111 aa12.16□□□□□ -0.46
PMPCA-212ENST00000622209 UQCR10Q9UDW1 63 aa12.16□□□□□ -0.46
PMPCA-212ENST00000622209 SLC25A20O43772 301 aa12.15□□□□□ -0.46
PMPCA-212ENST00000622209 MOBPQ13875 183 aa12.15□□□□□ -0.46
PMPCA-212ENST00000622209 TEX49A0A1B0GTD5 131 aa12.13□□□□□ -0.47
PMPCA-212ENST00000622209 HSD52Q0P140 79 aa12.13□□□□□ -0.47
PMPCA-212ENST00000622209 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
PMPCA-212ENST00000622209 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
PMPCA-212ENST00000622209 DEFB105AQ8NG35 78 aa12.12□□□□□ -0.47
PMPCA-212ENST00000622209 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
PMPCA-212ENST00000622209 IGLV5-48A0A075B6I7 105 aa12.11□□□□□ -0.47
PMPCA-212ENST00000622209 FXYD2P54710 66 aa12.11□□□□□ -0.47
PMPCA-212ENST00000622209 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
PMPCA-212ENST00000622209 H7C2G1 150 aa12.1□□□□□ -0.47
PMPCA-212ENST00000622209 C9orf153Q5TBE3 101 aa12.1□□□□□ -0.47
PMPCA-212ENST00000622209 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
PMPCA-212ENST00000622209 SPINK1P00995 79 aa12.09□□□□□ -0.47
PMPCA-212ENST00000622209 LINC01547P58512 204 aaPredicted RBP12.08□□□□□ -0.48
PMPCA-212ENST00000622209 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.48
PMPCA-212ENST00000622209 SMIM6P0DI80 62 aa12.06□□□□□ -0.48
PMPCA-212ENST00000622209 FAT4Q6V0I7 4981 aa12.05□□□□□ -0.48
PMPCA-212ENST00000622209 H0YGX0 51 aa12.04□□□□□ -0.48
PMPCA-212ENST00000622209 Q1RN00 199 aa12.04□□□□□ -0.48
PMPCA-212ENST00000622209 SMIM29Q86T20 159 aa12.04□□□□□ -0.48
PMPCA-212ENST00000622209 Q8N377 158 aa12.04□□□□□ -0.48
PMPCA-212ENST00000622209 IGLV7-46A0A075B6I9 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms