RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 BPY2O14599 106 aa14.71□□□□□ -0.05
POLR2J3-220ENST00000613744 CELA1Q9UNI1 258 aa14.71□□□□□ -0.05
POLR2J3-220ENST00000613744 GYPEP15421 78 aa14.7□□□□□ -0.06
POLR2J3-220ENST00000613744 CHCHD10Q8WYQ3 142 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-220ENST00000613744 DIRC1Q969H9 104 aa14.68□□□□□ -0.06
POLR2J3-220ENST00000613744 C9orf116Q5BN46 136 aaPredicted RBP14.67□□□□□ -0.06
POLR2J3-220ENST00000613744 LINC00269Q8N2A0 174 aa14.67□□□□□ -0.06
POLR2J3-220ENST00000613744 PKIGQ9Y2B9 76 aa14.67□□□□□ -0.06
POLR2J3-220ENST00000613744 CLPSL2Q6UWE3 100 aa14.67□□□□□ -0.06
POLR2J3-220ENST00000613744 TGP01266 2768 aa14.66□□□□□ -0.06
POLR2J3-220ENST00000613744 A0A0U1RQV1 116 aa14.66□□□□□ -0.06
POLR2J3-220ENST00000613744 LYRM9A8MSI8 78 aa14.66□□□□□ -0.06
POLR2J3-220ENST00000613744 COX7BP24311 80 aa14.66□□□□□ -0.06
POLR2J3-220ENST00000613744 BRK1Q8WUW1 75 aa14.66□□□□□ -0.06
POLR2J3-220ENST00000613744 PRYO14603 147 aa14.65□□□□□ -0.06
POLR2J3-220ENST00000613744 SPART-AS1P0CW21 52 aa14.65□□□□□ -0.06
POLR2J3-220ENST00000613744 DAD1P61803 113 aa14.64□□□□□ -0.07
POLR2J3-220ENST00000613744 PRO0255Q9UI72 69 aa14.64□□□□□ -0.07
POLR2J3-220ENST00000613744 C1orf195Q5TG92 126 aa14.63□□□□□ -0.07
POLR2J3-220ENST00000613744 STAB2Q8WWQ8 2551 aa14.63□□□□□ -0.07
POLR2J3-220ENST00000613744 ESRGQ1W209 222 aa14.62□□□□□ -0.07
POLR2J3-220ENST00000613744 OCR1Q9BZK8 76 aa14.62□□□□□ -0.07
POLR2J3-220ENST00000613744 GVQW2A0A096LPI5 108 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-220ENST00000613744 SCXQ7RTU7 201 aa14.62□□□□□ -0.07
POLR2J3-220ENST00000613744 REG3AQ06141 175 aa14.61□□□□□ -0.07
POLR2J3-220ENST00000613744 FUSP35637 526 aaKnown RBP eCLIP14.61□□□□□ -0.07
POLR2J3-220ENST00000613744 HTN3P15516 51 aa14.6□□□□□ -0.07
POLR2J3-220ENST00000613744 ELOF1P60002 83 aaKnown RBP14.6□□□□□ -0.07
POLR2J3-220ENST00000613744 C11orf45Q8TAV5 145 aa14.6□□□□□ -0.07
POLR2J3-220ENST00000613744 IGKV4-1P06312 121 aa14.59□□□□□ -0.07
POLR2J3-220ENST00000613744 SPAG11BQ08648 103 aa14.59□□□□□ -0.07
POLR2J3-220ENST00000613744 V9GYY9 64 aa14.59□□□□□ -0.07
POLR2J3-220ENST00000613744 ZNF73O43830 326 aaPredicted RBP14.57□□□□□ -0.08
POLR2J3-220ENST00000613744 UNQ6190/PRO20217Q6UXQ8 127 aa14.57□□□□□ -0.08
POLR2J3-220ENST00000613744 Q6ZTC4 211 aa14.57□□□□□ -0.08
POLR2J3-220ENST00000613744 ANGP03950 147 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-220ENST00000613744 FAM229BQ4G0N7 80 aa14.56□□□□□ -0.08
POLR2J3-220ENST00000613744 C10orf25Q5T742 122 aa14.56□□□□□ -0.08
POLR2J3-220ENST00000613744 IGLV10-54A0A075B6I4 117 aa14.53□□□□□ -0.08
POLR2J3-220ENST00000613744 MPLKIPQ8TAP9 179 aa14.51□□□□□ -0.09
POLR2J3-220ENST00000613744 A0A1B0GW54 56 aa14.48□□□□□ -0.09
POLR2J3-220ENST00000613744 LCE6AA0A183 80 aa14.47□□□□□ -0.09
POLR2J3-220ENST00000613744 DEFB131BA0A096LNP1 70 aa14.46□□□□□ -0.09
POLR2J3-220ENST00000613744 A0A096LPF7 62 aa14.46□□□□□ -0.09
POLR2J3-220ENST00000613744 LINC00528Q8N1L1 170 aa14.45□□□□□ -0.1
POLR2J3-220ENST00000613744 SEC61GP60059 68 aa14.45□□□□□ -0.1
POLR2J3-220ENST00000613744 HIGD2BQ4VC39 106 aa14.44□□□□□ -0.1
POLR2J3-220ENST00000613744 PRR15Q8IV56 129 aa14.44□□□□□ -0.1
POLR2J3-220ENST00000613744 CSMD3Q7Z407 3707 aa14.44□□□□□ -0.1
POLR2J3-220ENST00000613744 hDV103S1A0JD37 113 aa14.43□□□□□ -0.1
POLR2J3-220ENST00000613744 M0R378 163 aa14.43□□□□□ -0.1
POLR2J3-220ENST00000613744 HIGD2AQ9BW72 106 aa14.43□□□□□ -0.1
POLR2J3-220ENST00000613744 C6orf48Q9UBA6 75 aa14.43□□□□□ -0.1
POLR2J3-220ENST00000613744 DNAH7Q8WXX0 4024 aa14.42□□□□□ -0.1
POLR2J3-220ENST00000613744 Q1T7F1 81 aa14.42□□□□□ -0.1
POLR2J3-220ENST00000613744 Q8N9L7 120 aa14.42□□□□□ -0.1
POLR2J3-220ENST00000613744 PRR34Q9NV39 138 aa14.42□□□□□ -0.1
POLR2J3-220ENST00000613744 VPREB1P12018 145 aa14.42□□□□□ -0.1
POLR2J3-220ENST00000613744 WWC2-AS2Q96NR7 200 aa14.38□□□□□ -0.11
POLR2J3-220ENST00000613744 LELP1Q5T871 98 aa14.38□□□□□ -0.11
POLR2J3-220ENST00000613744 XAGE1AQ9HD64 81 aa14.37□□□□□ -0.11
POLR2J3-220ENST00000613744 STARD9Q9P2P6 4700 aa14.35□□□□□ -0.11
POLR2J3-220ENST00000613744 Q6ZRU5 148 aa14.34□□□□□ -0.11
POLR2J3-220ENST00000613744 IGLV5-48A0A075B6I7 105 aa14.34□□□□□ -0.11
POLR2J3-220ENST00000613744 ZCCHC13Q8WW36 166 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-220ENST00000613744 SMIM29Q86T20 159 aa14.3□□□□□ -0.12
POLR2J3-220ENST00000613744 NUPR2A6NF83 97 aa14.29□□□□□ -0.12
POLR2J3-220ENST00000613744 CYP4F30PQ9H0H9 118 aa14.29□□□□□ -0.12
POLR2J3-220ENST00000613744 KLK12Q9UKR0 248 aa14.29□□□□□ -0.12
POLR2J3-220ENST00000613744 H3BNG1 76 aa14.28□□□□□ -0.12
POLR2J3-220ENST00000613744 TENM2Q9NT68 2774 aa14.28□□□□□ -0.12
POLR2J3-220ENST00000613744 C3orf84H3BNL1 204 aa14.27□□□□□ -0.12
POLR2J3-220ENST00000613744 C1orf64Q8NEQ6 169 aa14.27□□□□□ -0.12
POLR2J3-220ENST00000613744 LYSTQ99698 3801 aa14.27□□□□□ -0.12
POLR2J3-220ENST00000613744 FAM30AQ9NZY2 134 aa14.27□□□□□ -0.12
POLR2J3-220ENST00000613744 Q6ZRP5 223 aa14.27□□□□□ -0.13
POLR2J3-220ENST00000613744 PMAIP1Q13794 54 aa14.26□□□□□ -0.13
POLR2J3-220ENST00000613744 CAMK2N2Q96S95 79 aa14.26□□□□□ -0.13
POLR2J3-220ENST00000613744 PLECQ15149 4684 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-220ENST00000613744 ETDCA0A1B0GVM5 59 aa14.25□□□□□ -0.13
POLR2J3-220ENST00000613744 DYNC2H1Q8NCM8 4307 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-220ENST00000613744 CASC10Q5T4H9 136 aa14.23□□□□□ -0.13
POLR2J3-220ENST00000613744 APLNQ9ULZ1 77 aa14.23□□□□□ -0.13
POLR2J3-220ENST00000613744 Q8N377 158 aa14.22□□□□□ -0.13
POLR2J3-220ENST00000613744 KCNQ1DNQ9H478 68 aa14.21□□□□□ -0.13
POLR2J3-220ENST00000613744 NDUFB1O75438 58 aa14.18□□□□□ -0.14
POLR2J3-220ENST00000613744 DHRS4-AS1Q9P1J3 65 aa14.18□□□□□ -0.14
POLR2J3-220ENST00000613744 Q8NBF4 154 aa14.17□□□□□ -0.14
POLR2J3-220ENST00000613744 A0A1W2PNM2 257 aa14.16□□□□□ -0.14
POLR2J3-220ENST00000613744 SPRR4Q96PI1 79 aa14.16□□□□□ -0.14
POLR2J3-220ENST00000613744 TNP2Q05952 138 aa14.16□□□□□ -0.14
POLR2J3-220ENST00000613744 TRAV22A0A0B4J277 110 aa14.14□□□□□ -0.15
POLR2J3-220ENST00000613744 WFDC10BQ8IUB3 73 aa14.14□□□□□ -0.15
POLR2J3-220ENST00000613744 LINC00588Q9Y4M8 146 aa14.14□□□□□ -0.15
POLR2J3-220ENST00000613744 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.13□□□□□ -0.15
POLR2J3-220ENST00000613744 DSCR10P59022 87 aa14.12□□□□□ -0.15
POLR2J3-220ENST00000613744 KRTAP26-1Q6PEX3 210 aa14.12□□□□□ -0.15
POLR2J3-220ENST00000613744 C1orf137Q5JT78 98 aa14.11□□□□□ -0.15
POLR2J3-220ENST00000613744 DEFB105AQ8NG35 78 aa14.11□□□□□ -0.15
POLR2J3-220ENST00000613744 PSCAO43653 123 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms