RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TSPAN13O95857 204 aa4.24□□□□□ -1.73
PTCHD3P1-201ENST00000612350 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
PTCHD3P1-201ENST00000612350 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
PTCHD3P1-201ENST00000612350 SND1-IT1Q9HBX3 110 aa4.24□□□□□ -1.73
PTCHD3P1-201ENST00000612350 A0A0J9YXY3 114 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 FAM168BA1KXE4 195 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 ZNF815PA8K554 130 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 TIMM17BO60830 172 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 MIR7-3HGQ8N6C7 128 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 DIRC1Q969H9 104 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 C22orf24Q9Y442 160 aa4.23□□□□□ -1.73
PTCHD3P1-201ENST00000612350 IGKV2D-26A0A0A0MRZ7 120 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 H0Y9J4 135 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 M0R143 59 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 SLC25A34Q6PIV7 304 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 MRPL55Q7Z7F7 128 aaKnown RBP4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 NKAPP1Q8N9T2 125 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 COPS9Q8WXC6 57 aa4.22□□□□□ -1.73
PTCHD3P1-201ENST00000612350 A0A0U1RRA0 63 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 TMEM238C9JI98 176 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 IGLV7-43P04211 117 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 CRYGAP11844 174 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 VPREB1P12018 145 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 RPL13AP40429 203 aaKnown RBP4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 UBE2BP63146 152 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 C1orf137Q5JT78 98 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 Q6ZVH6 145 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 PPDPFQ9H3Y8 114 aa4.21□□□□□ -1.74
PTCHD3P1-201ENST00000612350 NDUFC2O95298 119 aa4.2□□□□□ -1.74
PTCHD3P1-201ENST00000612350 MT1HP80294 61 aa4.2□□□□□ -1.74
PTCHD3P1-201ENST00000612350 SCGB1D4Q6XE38 83 aa4.2□□□□□ -1.74
PTCHD3P1-201ENST00000612350 BOD1L2Q8IYS8 172 aa4.2□□□□□ -1.74
PTCHD3P1-201ENST00000612350 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 M0R378 163 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 COX8AP10176 69 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 IFITM1P13164 125 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 C14orf144Q96I85 54 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 LITAFQ99732 161 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 SPANXCQ9NY87 97 aa4.19□□□□□ -1.74
PTCHD3P1-201ENST00000612350 DLEU1O43261 78 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 BATFQ16520 125 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 PCP2Q8IVA1 136 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 DAND5Q8N907 189 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 LINC00308Q8TCZ7 52 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 RETNLBQ9BQ08 111 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 TTTY13Q9BZ97 58 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 SPANXB1Q9NS25 103 aaPredicted RBP4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 CBY1Q9Y3M2 126 aa4.18□□□□□ -1.74
PTCHD3P1-201ENST00000612350 BCE1O60756 84 aa4.17□□□□□ -1.74
PTCHD3P1-201ENST00000612350 ASB16-AS1Q495Z4 193 aa4.17□□□□□ -1.74
PTCHD3P1-201ENST00000612350 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
PTCHD3P1-201ENST00000612350 IGLV7-46A0A075B6I9 117 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 RPL37AP8A6NKH3 93 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 RPL28P46779 137 aaKnown RBP4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 SOSTDC1Q6X4U4 206 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 KRTAP11-1Q8IUC1 163 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 Q8NDZ9 215 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 KCNQ1DNQ9H478 68 aa4.16□□□□□ -1.74
PTCHD3P1-201ENST00000612350 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 A4D1N5 150 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 A6NDN8 102 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 PRYO14603 147 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 ZNF861PO60384 105 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 IGKV2D-28P01615 120 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 HSD52Q0P140 79 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 S100A7L2Q5SY68 101 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 TMEM126AQ9H061 195 aa4.15□□□□□ -1.75
PTCHD3P1-201ENST00000612350 NCR3O14931 201 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 IGLV6-57P01721 117 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 SPRR1AP35321 89 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 NPC2P61916 151 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 HIGD1BQ9P298 99 aa4.14□□□□□ -1.75
PTCHD3P1-201ENST00000612350 TRBV10-3A0A0K0K1G6 114 aa4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 UBE2AP49459 152 aa4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 HINT1P49773 126 aaPredicted RBP4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 TAL2Q16559 108 aa4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
PTCHD3P1-201ENST00000612350 TRAV13-2A0A0B4J235 113 aa4.12□□□□□ -1.75
PTCHD3P1-201ENST00000612350 FAM19A1Q7Z5A9 133 aa4.12□□□□□ -1.75
PTCHD3P1-201ENST00000612350 KRTAP13-1Q8IUC0 172 aa4.12□□□□□ -1.75
PTCHD3P1-201ENST00000612350 HIST1H4GQ99525 98 aa4.12□□□□□ -1.75
PTCHD3P1-201ENST00000612350 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
PTCHD3P1-201ENST00000612350 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
PTCHD3P1-201ENST00000612350 A0A087X002 238 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 490.9 ms