RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 HIST1H2BLQ99880 126 aa5.04□□□□□ -1.6
APOC1-207ENST00000592176 IGLV8-61A0A075B6I0 122 aa5.03□□□□□ -1.6
APOC1-207ENST00000592176 NCR3O14931 201 aa5.03□□□□□ -1.6
APOC1-207ENST00000592176 KRTDAPP60985 99 aa5.03□□□□□ -1.6
APOC1-207ENST00000592176 S100A12P80511 92 aa5.03□□□□□ -1.6
APOC1-207ENST00000592176 TMEM223A0PJW6 202 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 B5MCH6 92 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 ERC2-IT1O76042 136 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 SMIM13P0DJ93 91 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 HERVK_113P61574 105 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 PCOTHQ58A44 107 aa5.02□□□□□ -1.61
APOC1-207ENST00000592176 TRBV10-3A0A0K0K1G6 114 aa5.01□□□□□ -1.61
APOC1-207ENST00000592176 SCGB1D1O95968 90 aa5.01□□□□□ -1.61
APOC1-207ENST00000592176 LINC00310P59036 64 aa5.01□□□□□ -1.61
APOC1-207ENST00000592176 CHTOPQ9Y3Y2 248 aaKnown RBP5.01□□□□□ -1.61
APOC1-207ENST00000592176 H0Y8G0 127 aa5□□□□□ -1.61
APOC1-207ENST00000592176 DPM2O94777 84 aa5□□□□□ -1.61
APOC1-207ENST00000592176 SMIM6P0DI80 62 aa5□□□□□ -1.61
APOC1-207ENST00000592176 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
APOC1-207ENST00000592176 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
APOC1-207ENST00000592176 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
APOC1-207ENST00000592176 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
APOC1-207ENST00000592176 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 LINC00587B1AMM8 73 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 M0R2T5 61 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 IGKCP01834 107 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 C3orf79P0CE67 100 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 JOSD1Q15040 202 aaPredicted RBP4.99□□□□□ -1.61
APOC1-207ENST00000592176 C9orf153Q5TBE3 101 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 LINC01545Q5VT33 79 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
APOC1-207ENST00000592176 Q9BRP9 147 aa4.98□□□□□ -1.61
APOC1-207ENST00000592176 C9orf92A6NGG3 77 aa4.97□□□□□ -1.61
APOC1-207ENST00000592176 DDTP30046 118 aa4.97□□□□□ -1.61
APOC1-207ENST00000592176 HERV-K104P63124 156 aa4.97□□□□□ -1.61
APOC1-207ENST00000592176 Q6ZRX8 168 aa4.96□□□□□ -1.62
APOC1-207ENST00000592176 VAMP8Q9BV40 100 aa4.96□□□□□ -1.62
APOC1-207ENST00000592176 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
APOC1-207ENST00000592176 MYMXA0A1B0GTQ4 84 aa4.95□□□□□ -1.62
APOC1-207ENST00000592176 TSPEAR-AS2P59090 65 aa4.95□□□□□ -1.62
APOC1-207ENST00000592176 NMUP48645 174 aa4.94□□□□□ -1.62
APOC1-207ENST00000592176 HRCT1Q6UXD1 115 aa4.94□□□□□ -1.62
APOC1-207ENST00000592176 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
APOC1-207ENST00000592176 LOC105371267A0A1B0GV96 52 aa4.93□□□□□ -1.62
APOC1-207ENST00000592176 TSTD3H0UI37 97 aa4.93□□□□□ -1.62
APOC1-207ENST00000592176 LGALS3P17931 250 aaKnown RBP4.93□□□□□ -1.62
APOC1-207ENST00000592176 S100A7L2Q5SY68 101 aa4.93□□□□□ -1.62
APOC1-207ENST00000592176 COX6B2Q6YFQ2 88 aa4.93□□□□□ -1.62
APOC1-207ENST00000592176 ST20-AS1Q8NBB2 130 aa4.93□□□□□ -1.62
APOC1-207ENST00000592176 PMCHL2Q9BQD1 86 aa4.93□□□□□ -1.62
APOC1-207ENST00000592176 IGLV6-57P01721 117 aa4.92□□□□□ -1.62
APOC1-207ENST00000592176 PYY3Q5JQD4 70 aa4.92□□□□□ -1.62
APOC1-207ENST00000592176 COPS9Q8WXC6 57 aa4.92□□□□□ -1.62
APOC1-207ENST00000592176 E9PLD3 99 aa4.91□□□□□ -1.62
APOC1-207ENST00000592176 SPANXB1Q9NS25 103 aaPredicted RBP4.91□□□□□ -1.62
APOC1-207ENST00000592176 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 LEPROTO15243 131 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 ZNF73O43830 326 aaPredicted RBP4.9□□□□□ -1.63
APOC1-207ENST00000592176 NDUFC2O95298 119 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 HINT1P49773 126 aaPredicted RBP4.9□□□□□ -1.63
APOC1-207ENST00000592176 SPATA45Q537H7 98 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 SLC25A34Q6PIV7 304 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 C12orf57Q99622 126 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 MIEN1Q9BRT3 115 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 PAM16Q9Y3D7 125 aa4.9□□□□□ -1.63
APOC1-207ENST00000592176 J3QQQ9 107 aa4.89□□□□□ -1.63
APOC1-207ENST00000592176 EIF4EBP3O60516 100 aaPredicted RBP4.89□□□□□ -1.63
APOC1-207ENST00000592176 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
APOC1-207ENST00000592176 SCGB1D4Q6XE38 83 aa4.89□□□□□ -1.63
APOC1-207ENST00000592176 ATOH7Q8N100 152 aa4.89□□□□□ -1.63
APOC1-207ENST00000592176 UQCR10Q9UDW1 63 aa4.89□□□□□ -1.63
APOC1-207ENST00000592176 LAMTOR3Q9UHA4 124 aa4.89□□□□□ -1.63
APOC1-207ENST00000592176 DLEU1O43261 78 aa4.88□□□□□ -1.63
APOC1-207ENST00000592176 SPRR1BP22528 89 aa4.88□□□□□ -1.63
APOC1-207ENST00000592176 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
APOC1-207ENST00000592176 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.87□□□□□ -1.63
APOC1-207ENST00000592176 CD164Q04900 197 aa4.87□□□□□ -1.63
APOC1-207ENST00000592176 Q6ZVH6 145 aa4.87□□□□□ -1.63
APOC1-207ENST00000592176 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
APOC1-207ENST00000592176 CBY1Q9Y3M2 126 aa4.87□□□□□ -1.63
APOC1-207ENST00000592176 COX8AP10176 69 aa4.86□□□□□ -1.63
APOC1-207ENST00000592176 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
APOC1-207ENST00000592176 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
APOC1-207ENST00000592176 PRO1933Q9H354 126 aa4.86□□□□□ -1.63
APOC1-207ENST00000592176 DHRS4-AS1Q9P1J3 65 aa4.86□□□□□ -1.63
APOC1-207ENST00000592176 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
APOC1-207ENST00000592176 H7C2G1 150 aa4.85□□□□□ -1.63
APOC1-207ENST00000592176 TAL2Q16559 108 aa4.85□□□□□ -1.63
APOC1-207ENST00000592176 LITAFQ99732 161 aa4.85□□□□□ -1.63
APOC1-207ENST00000592176 A0A0J9YXY3 114 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 TMEM238LA0A1B0GVL6 79 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 A6NJY4 79 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 TIMM17BO60830 172 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 NPC2P61916 151 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 C1orf195Q5TG92 126 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 DEFB105AQ8NG35 78 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 OR13C6PQ8NH95 151 aa4.84□□□□□ -1.63
APOC1-207ENST00000592176 M0R143 59 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms