RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SPACA4Q8TDM5 124 aa8.99□□□□□ -0.97
SMARCA4-216ENST00000591545 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
SMARCA4-216ENST00000591545 HELZ2Q9BYK8 2649 aaKnown RBP8.98□□□□□ -0.97
SMARCA4-216ENST00000591545 USP24Q9UPU5 2620 aa8.98□□□□□ -0.97
SMARCA4-216ENST00000591545 KRTAP1-3Q8IUG1 177 aa8.98□□□□□ -0.97
SMARCA4-216ENST00000591545 KRTAP10-3P60369 221 aa8.96□□□□□ -0.97
SMARCA4-216ENST00000591545 IGLV6-57P01721 117 aa8.96□□□□□ -0.97
SMARCA4-216ENST00000591545 TM2D3Q9BRN9 247 aa8.96□□□□□ -0.97
SMARCA4-216ENST00000591545 WDFY4Q6ZS81 3184 aa8.96□□□□□ -0.98
SMARCA4-216ENST00000591545 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.98
SMARCA4-216ENST00000591545 CSNK1G2-AS1Q8NCQ2 148 aa8.95□□□□□ -0.98
SMARCA4-216ENST00000591545 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
SMARCA4-216ENST00000591545 VPS13AQ96RL7 3174 aa8.95□□□□□ -0.98
SMARCA4-216ENST00000591545 REV3LO60673 3130 aa8.94□□□□□ -0.98
SMARCA4-216ENST00000591545 RPL37AP61513 92 aaKnown RBP8.94□□□□□ -0.98
SMARCA4-216ENST00000591545 EPM2AB3EWF7 344 aa8.93□□□□□ -0.98
SMARCA4-216ENST00000591545 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
SMARCA4-216ENST00000591545 VPREB1P12018 145 aa8.93□□□□□ -0.98
SMARCA4-216ENST00000591545 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
SMARCA4-216ENST00000591545 MGAQ8IWI9 3026 aa8.92□□□□□ -0.98
SMARCA4-216ENST00000591545 LINC00313P59037 77 aa8.91□□□□□ -0.98
SMARCA4-216ENST00000591545 A8MWP4 228 aa8.91□□□□□ -0.98
SMARCA4-216ENST00000591545 MAST4O15021 2626 aa8.9□□□□□ -0.98
SMARCA4-216ENST00000591545 CYP4F30PQ9H0H9 118 aa8.9□□□□□ -0.98
SMARCA4-216ENST00000591545 CHTF8P0CG12 524 aa8.9□□□□□ -0.98
SMARCA4-216ENST00000591545 LINC00336Q6ZUF6 198 aa8.89□□□□□ -0.99
SMARCA4-216ENST00000591545 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
SMARCA4-216ENST00000591545 EYSQ5T1H1 3165 aa8.89□□□□□ -0.99
SMARCA4-216ENST00000591545 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
SMARCA4-216ENST00000591545 CELSR3Q9NYQ7 3312 aa8.88□□□□□ -0.99
SMARCA4-216ENST00000591545 KCNQ1DNQ9H478 68 aa8.86□□□□□ -0.99
SMARCA4-216ENST00000591545 ZNF292O60281 2723 aa8.86□□□□□ -0.99
SMARCA4-216ENST00000591545 KLKP1Q107X0 134 aa8.84□□□□□ -0.99
SMARCA4-216ENST00000591545 SERTAD4-AS1Q5TG53 156 aa8.84□□□□□ -0.99
SMARCA4-216ENST00000591545 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
SMARCA4-216ENST00000591545 MRPL34Q9BQ48 92 aaKnown RBP8.84□□□□□ -0.99
SMARCA4-216ENST00000591545 SPEGQ15772 3267 aa8.84□□□□□ -0.99
SMARCA4-216ENST00000591545 IGLV1-50A0A075B6I6 118 aa8.83□□□□□ -1
SMARCA4-216ENST00000591545 A0A087WTM6 91 aa8.83□□□□□ -1
SMARCA4-216ENST00000591545 ATRQ13535 2644 aa8.82□□□□□ -1
SMARCA4-216ENST00000591545 K7EQZ3 153 aa8.82□□□□□ -1
SMARCA4-216ENST00000591545 FLNAP21333 2647 aaKnown RBP8.82□□□□□ -1
SMARCA4-216ENST00000591545 GIG44P09565 113 aaPredicted RBP8.82□□□□□ -1
SMARCA4-216ENST00000591545 COA5Q86WW8 74 aa8.82□□□□□ -1
SMARCA4-216ENST00000591545 LINC00612Q8N6U2 182 aa8.81□□□□□ -1
SMARCA4-216ENST00000591545 AKAP13Q12802 2813 aa8.8□□□□□ -1
SMARCA4-216ENST00000591545 ITPR3Q14573 2671 aa8.79□□□□□ -1
SMARCA4-216ENST00000591545 PRR34Q9NV39 138 aa8.79□□□□□ -1
SMARCA4-216ENST00000591545 APLNQ9ULZ1 77 aa8.79□□□□□ -1
SMARCA4-216ENST00000591545 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
SMARCA4-216ENST00000591545 A8MUN3 132 aa8.77□□□□□ -1.01
SMARCA4-216ENST00000591545 UQCR11O14957 56 aa8.77□□□□□ -1.01
SMARCA4-216ENST00000591545 CFAP46Q8IYW2 2715 aa8.77□□□□□ -1.01
SMARCA4-216ENST00000591545 COL6A3P12111 3177 aa8.76□□□□□ -1.01
SMARCA4-216ENST00000591545 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
SMARCA4-216ENST00000591545 WIPF1O43516 503 aa8.75□□□□□ -1.01
SMARCA4-216ENST00000591545 PLA2G2DQ9UNK4 145 aa8.75□□□□□ -1.01
SMARCA4-216ENST00000591545 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
SMARCA4-216ENST00000591545 LINC01600Q96MT4 127 aa8.75□□□□□ -1.01
SMARCA4-216ENST00000591545 FAM168BA1KXE4 195 aa8.75□□□□□ -1.01
SMARCA4-216ENST00000591545 Q96NJ1 140 aa8.74□□□□□ -1.01
SMARCA4-216ENST00000591545 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
SMARCA4-216ENST00000591545 SMR3BP02814 79 aaPredicted RBP8.73□□□□□ -1.01
SMARCA4-216ENST00000591545 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
SMARCA4-216ENST00000591545 TNRC18O15417 2968 aaPredicted RBP8.72□□□□□ -1.01
SMARCA4-216ENST00000591545 DSPP15924 2871 aaKnown RBP8.72□□□□□ -1.01
SMARCA4-216ENST00000591545 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
SMARCA4-216ENST00000591545 ZNF861PO60384 105 aa8.72□□□□□ -1.01
SMARCA4-216ENST00000591545 C15orf56Q8N910 161 aa8.72□□□□□ -1.01
SMARCA4-216ENST00000591545 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.01
SMARCA4-216ENST00000591545 CD164Q04900 197 aa8.71□□□□□ -1.01
SMARCA4-216ENST00000591545 FRYLO94915 3013 aa8.71□□□□□ -1.02
SMARCA4-216ENST00000591545 MYO15AQ9UKN7 3530 aa8.71□□□□□ -1.02
SMARCA4-216ENST00000591545 LINC00304Q8N9R0 145 aa8.71□□□□□ -1.02
SMARCA4-216ENST00000591545 H7BZZ5 65 aa8.7□□□□□ -1.02
SMARCA4-216ENST00000591545 Q8N377 158 aa8.7□□□□□ -1.02
SMARCA4-216ENST00000591545 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
SMARCA4-216ENST00000591545 ZNF575Q86XF7 245 aa8.7□□□□□ -1.02
SMARCA4-216ENST00000591545 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
SMARCA4-216ENST00000591545 SPINT4Q6UDR6 99 aa8.67□□□□□ -1.02
SMARCA4-216ENST00000591545 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
SMARCA4-216ENST00000591545 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-216ENST00000591545 MIR22HGQ0VDD5 57 aa8.65□□□□□ -1.02
SMARCA4-216ENST00000591545 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
SMARCA4-216ENST00000591545 USP34Q70CQ2 3546 aa8.65□□□□□ -1.02
SMARCA4-216ENST00000591545 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
SMARCA4-216ENST00000591545 FREM2Q5SZK8 3169 aa8.63□□□□□ -1.03
SMARCA4-216ENST00000591545 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
SMARCA4-216ENST00000591545 CASC10Q5T4H9 136 aa8.62□□□□□ -1.03
SMARCA4-216ENST00000591545 FRYQ5TBA9 3013 aa8.61□□□□□ -1.03
SMARCA4-216ENST00000591545 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
SMARCA4-216ENST00000591545 DSCR10P59022 87 aa8.61□□□□□ -1.03
SMARCA4-216ENST00000591545 BOD1L1Q8NFC6 3051 aa8.6□□□□□ -1.03
SMARCA4-216ENST00000591545 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.03
SMARCA4-216ENST00000591545 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
SMARCA4-216ENST00000591545 KTN1-AS1Q86SY8 53 aa8.58□□□□□ -1.04
SMARCA4-216ENST00000591545 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
SMARCA4-216ENST00000591545 NBEAQ8NFP9 2946 aa8.58□□□□□ -1.04
SMARCA4-216ENST00000591545 TNP2Q05952 138 aa8.58□□□□□ -1.04
SMARCA4-216ENST00000591545 CENPEQ02224 2701 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms