RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 COL5A1-AS1Q5SY13 56 aa5.85□□□□□ -1.47
BRCA1-226ENST00000591534 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
BRCA1-226ENST00000591534 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
BRCA1-226ENST00000591534 LINC00526Q96FQ7 95 aa5.85□□□□□ -1.47
BRCA1-226ENST00000591534 GAGE2BQ13066 116 aa5.84□□□□□ -1.47
BRCA1-226ENST00000591534 KIAA0087Q14695 138 aa5.84□□□□□ -1.47
BRCA1-226ENST00000591534 TNXBP22105 4242 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 TRAV13-2A0A0B4J235 113 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 LOC107984156A0A0G2JMH3 177 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 SNCGO76070 127 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 TLX1NBP0CAT3 122 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 SMIM13P0DJ93 91 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 TSPEAR-AS2P59090 65 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 ARL17AQ8IVW1 177 aa5.83□□□□□ -1.48
BRCA1-226ENST00000591534 NDUFC2O95298 119 aa5.82□□□□□ -1.48
BRCA1-226ENST00000591534 RAB37Q96AX2 223 aa5.82□□□□□ -1.48
BRCA1-226ENST00000591534 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
BRCA1-226ENST00000591534 COX6CP09669 75 aa5.81□□□□□ -1.48
BRCA1-226ENST00000591534 PFN2P35080 140 aa5.81□□□□□ -1.48
BRCA1-226ENST00000591534 BVES-AS1Q5T3Y7 98 aa5.81□□□□□ -1.48
BRCA1-226ENST00000591534 PSORS1C2Q9UIG4 136 aa5.81□□□□□ -1.48
BRCA1-226ENST00000591534 RPL18AQ02543 176 aaKnown RBP5.8□□□□□ -1.48
BRCA1-226ENST00000591534 MIR7-3HGQ8N6C7 128 aa5.8□□□□□ -1.48
BRCA1-226ENST00000591534 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
BRCA1-226ENST00000591534 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
BRCA1-226ENST00000591534 TTTY13Q9BZ97 58 aa5.8□□□□□ -1.48
BRCA1-226ENST00000591534 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
BRCA1-226ENST00000591534 HINT1P49773 126 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-226ENST00000591534 BATFQ16520 125 aa5.79□□□□□ -1.48
BRCA1-226ENST00000591534 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-226ENST00000591534 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
BRCA1-226ENST00000591534 UNQ6190/PRO20217Q6UXQ8 127 aa5.79□□□□□ -1.48
BRCA1-226ENST00000591534 SND1-IT1Q9HBX3 110 aa5.79□□□□□ -1.48
BRCA1-226ENST00000591534 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
BRCA1-226ENST00000591534 A0A1B0GWB2 263 aa5.78□□□□□ -1.48
BRCA1-226ENST00000591534 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
BRCA1-226ENST00000591534 MUSTN1Q8IVN3 82 aa5.78□□□□□ -1.48
BRCA1-226ENST00000591534 LITAFQ99732 161 aa5.78□□□□□ -1.48
BRCA1-226ENST00000591534 TMEM126AQ9H061 195 aa5.78□□□□□ -1.48
BRCA1-226ENST00000591534 A0A1W2PNN7 141 aa5.77□□□□□ -1.49
BRCA1-226ENST00000591534 NHP2Q9NX24 153 aaKnown RBP5.77□□□□□ -1.49
BRCA1-226ENST00000591534 C6orf48Q9UBA6 75 aa5.77□□□□□ -1.49
BRCA1-226ENST00000591534 A4D1N5 150 aa5.76□□□□□ -1.49
BRCA1-226ENST00000591534 VAMP3Q15836 100 aa5.76□□□□□ -1.49
BRCA1-226ENST00000591534 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
BRCA1-226ENST00000591534 IGLV1-50A0A075B6I6 118 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 IGLV7-43P04211 117 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 Q1RN00 199 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 PHF5AQ7RTV0 110 aaKnown RBP5.75□□□□□ -1.49
BRCA1-226ENST00000591534 NKAPP1Q8N9T2 125 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 SNHG12Q9BXW3 62 aa5.75□□□□□ -1.49
BRCA1-226ENST00000591534 TRBV20-1A0A075B6N2 111 aa5.74□□□□□ -1.49
BRCA1-226ENST00000591534 A0A0U1RRA0 63 aa5.74□□□□□ -1.49
BRCA1-226ENST00000591534 H0Y9J4 135 aa5.74□□□□□ -1.49
BRCA1-226ENST00000591534 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
BRCA1-226ENST00000591534 FXYD2P54710 66 aa5.74□□□□□ -1.49
BRCA1-226ENST00000591534 H3BQ85 93 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 M0R378 163 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 CFC1BP0CG36 223 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 CFC1P0CG37 223 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 FABP2P12104 132 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 UBE2BP63146 152 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 GTF2H5Q6ZYL4 71 aa5.73□□□□□ -1.49
BRCA1-226ENST00000591534 A0A0U1RQV1 116 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 H0YGX0 51 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 PSMB2P49721 201 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 GAGE2EQ4V326 116 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 DAND5Q8N907 189 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 OR13C6PQ8NH95 151 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
BRCA1-226ENST00000591534 IGLV5-37A0A075B6J1 123 aa5.71□□□□□ -1.5
BRCA1-226ENST00000591534 SCGB1C2P0DMR2 95 aa5.71□□□□□ -1.5
BRCA1-226ENST00000591534 FAM19A5Q7Z5A7 132 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-226ENST00000591534 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
BRCA1-226ENST00000591534 NPC2P61916 151 aa5.7□□□□□ -1.5
BRCA1-226ENST00000591534 A0A1B0GX51 115 aa5.69□□□□□ -1.5
BRCA1-226ENST00000591534 M0QXV9 152 aa5.69□□□□□ -1.5
BRCA1-226ENST00000591534 SLC25A20O43772 301 aa5.69□□□□□ -1.5
BRCA1-226ENST00000591534 RPL28P46779 137 aaKnown RBP5.69□□□□□ -1.5
BRCA1-226ENST00000591534 PRR4Q16378 134 aa5.69□□□□□ -1.5
BRCA1-226ENST00000591534 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
BRCA1-226ENST00000591534 FAM168BA1KXE4 195 aa5.68□□□□□ -1.5
BRCA1-226ENST00000591534 UBE2V1Q13404 147 aa5.68□□□□□ -1.5
BRCA1-226ENST00000591534 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
BRCA1-226ENST00000591534 A0A1W2PPM0 123 aa5.67□□□□□ -1.5
BRCA1-226ENST00000591534 TAX1BP3O14907 124 aa5.67□□□□□ -1.5
BRCA1-226ENST00000591534 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
BRCA1-226ENST00000591534 ATXN8Q156A1 80 aa5.67□□□□□ -1.5
BRCA1-226ENST00000591534 SOSTDC1Q6X4U4 206 aa5.67□□□□□ -1.5
BRCA1-226ENST00000591534 KRTAP7-1Q8IUC3 87 aa5.67□□□□□ -1.5
BRCA1-226ENST00000591534 H3BUT2 72 aa5.66□□□□□ -1.5
BRCA1-226ENST00000591534 DNAL4O96015 105 aa5.66□□□□□ -1.5
BRCA1-226ENST00000591534 VPREB1P12018 145 aa5.66□□□□□ -1.5
BRCA1-226ENST00000591534 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
BRCA1-226ENST00000591534 MRPL55Q7Z7F7 128 aaKnown RBP5.66□□□□□ -1.5
BRCA1-226ENST00000591534 KRTAP11-1Q8IUC1 163 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms