RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, human

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-223	ENST00000590215	LINC00518	Q8N0U6	118 aa		11.24	□□□□□ -0.61
MBD1-223	ENST00000590215	MUSTN1	Q8IVN3	82 aa		11.23	□□□□□ -0.61
MBD1-223	ENST00000590215	PYY3	Q5JQD4	70 aa		11.22	□□□□□ -0.61
MBD1-223	ENST00000590215	VAMP8	Q9BV40	100 aa		11.22	□□□□□ -0.61
MBD1-223	ENST00000590215	SPATA45	Q537H7	98 aa		11.21	□□□□□ -0.61
MBD1-223	ENST00000590215	PAM16	Q9Y3D7	125 aa		11.21	□□□□□ -0.61
MBD1-223	ENST00000590215	CBY1	Q9Y3M2	126 aa		11.21	□□□□□ -0.61
MBD1-223	ENST00000590215	TRAV23DV6	A0A075B6W5	121 aa		11.2	□□□□□ -0.62
MBD1-223	ENST00000590215	ETDC	A0A1B0GVM5	59 aa		11.2	□□□□□ -0.62
MBD1-223	ENST00000590215		B5MCH6	92 aa		11.19	□□□□□ -0.62
MBD1-223	ENST00000590215	ZNF73	O43830	326 aa	Predicted RBP	11.18	□□□□□ -0.62
MBD1-223	ENST00000590215	PRR26	Q8N8Z3	221 aa		11.18	□□□□□ -0.62
MBD1-223	ENST00000590215	C14orf144	Q96I85	54 aa		11.18	□□□□□ -0.62
MBD1-223	ENST00000590215	OR13C6P	Q8NH95	151 aa		11.17	□□□□□ -0.62
MBD1-223	ENST00000590215	HIGD2A	Q9BW72	106 aa		11.17	□□□□□ -0.62
MBD1-223	ENST00000590215		Q6ZRX8	168 aa		11.15	□□□□□ -0.62
MBD1-223	ENST00000590215	SMCR5	Q8TEV8	140 aa		11.15	□□□□□ -0.62
MBD1-223	ENST00000590215	HIGD1B	Q9P298	99 aa		11.15	□□□□□ -0.62
MBD1-223	ENST00000590215	RPL13A	P40429	203 aa	Known RBP	11.14	□□□□□ -0.63
MBD1-223	ENST00000590215	SLC25A34	Q6PIV7	304 aa		11.14	□□□□□ -0.63
MBD1-223	ENST00000590215	FAM229B	Q4G0N7	80 aa		11.13	□□□□□ -0.63
MBD1-223	ENST00000590215		Q9BRP9	147 aa		11.12	□□□□□ -0.63
MBD1-223	ENST00000590215		A0A087X002	238 aa		11.11	□□□□□ -0.63
MBD1-223	ENST00000590215	TRAV13-2	A0A0B4J235	113 aa		11.11	□□□□□ -0.63
MBD1-223	ENST00000590215		A4D1N5	150 aa		11.11	□□□□□ -0.63
MBD1-223	ENST00000590215	C2orf91	Q6ZV80	131 aa		11.11	□□□□□ -0.63
MBD1-223	ENST00000590215	HIST1H4G	Q99525	98 aa		11.11	□□□□□ -0.63
MBD1-223	ENST00000590215	CRYGA	P11844	174 aa		11.1	□□□□□ -0.63
MBD1-223	ENST00000590215	SPRR4	Q96PI1	79 aa		11.1	□□□□□ -0.63
MBD1-223	ENST00000590215	ANAPC11	Q9NYG5	84 aa		11.1	□□□□□ -0.63
MBD1-223	ENST00000590215		A6NDN8	102 aa		11.09	□□□□□ -0.63
MBD1-223	ENST00000590215	HINT1	P49773	126 aa	Predicted RBP	11.09	□□□□□ -0.63
MBD1-223	ENST00000590215	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.09	□□□□□ -0.63
MBD1-223	ENST00000590215	ERC2-IT1	O76042	136 aa		11.08	□□□□□ -0.64
MBD1-223	ENST00000590215	TRBV7-6	A0A0J9YX20	115 aa		11.07	□□□□□ -0.64
MBD1-223	ENST00000590215	C6orf99	Q4VX62	202 aa		11.07	□□□□□ -0.64
MBD1-223	ENST00000590215	ELOF1	P60002	83 aa	Known RBP	11.06	□□□□□ -0.64
MBD1-223	ENST00000590215	KRTAP13-2	Q52LG2	175 aa		11.06	□□□□□ -0.64
MBD1-223	ENST00000590215	TAL2	Q16559	108 aa		11.04	□□□□□ -0.64
MBD1-223	ENST00000590215	LINC00483	Q53H64	154 aa		11.04	□□□□□ -0.64
MBD1-223	ENST00000590215	COX7B	P24311	80 aa		11.03	□□□□□ -0.64
MBD1-223	ENST00000590215	SMIM11B	Q8TCY0	68 aa		11.03	□□□□□ -0.64
MBD1-223	ENST00000590215	DHRS4-AS1	Q9P1J3	65 aa		11.03	□□□□□ -0.64
MBD1-223	ENST00000590215	HMCN2	Q8NDA2	5059 aa		11.02	□□□□□ -0.65
MBD1-223	ENST00000590215	TYMSOS	Q8TAI1	123 aa		11.02	□□□□□ -0.65
MBD1-223	ENST00000590215		A0A1B0GWB2	263 aa		11.01	□□□□□ -0.65
MBD1-223	ENST00000590215	CEND1	Q8N111	149 aa		10.99	□□□□□ -0.65
MBD1-223	ENST00000590215	CFC1B	P0CG36	223 aa		10.98	□□□□□ -0.65
MBD1-223	ENST00000590215	CFC1	P0CG37	223 aa		10.98	□□□□□ -0.65
MBD1-223	ENST00000590215	GAGE2A	Q6NT46	116 aa		10.98	□□□□□ -0.65
MBD1-223	ENST00000590215	C12orf57	Q99622	126 aa		10.98	□□□□□ -0.65
MBD1-223	ENST00000590215	UQCR10	Q9UDW1	63 aa		10.98	□□□□□ -0.65
MBD1-223	ENST00000590215	C3orf22	Q8N5N4	141 aa		10.97	□□□□□ -0.65
MBD1-223	ENST00000590215		A0A0B4J2C4	111 aa		10.96	□□□□□ -0.65
MBD1-223	ENST00000590215	ST20-AS1	Q8NBB2	130 aa		10.96	□□□□□ -0.65
MBD1-223	ENST00000590215	SMIM6	P0DI80	62 aa		10.94	□□□□□ -0.66
MBD1-223	ENST00000590215	SPRR1B	P22528	89 aa		10.94	□□□□□ -0.66
MBD1-223	ENST00000590215	HSD52	Q0P140	79 aa		10.94	□□□□□ -0.66
MBD1-223	ENST00000590215	TMEM238L	A0A1B0GVL6	79 aa		10.93	□□□□□ -0.66
MBD1-223	ENST00000590215		A6NJY4	79 aa		10.93	□□□□□ -0.66
MBD1-223	ENST00000590215	FXYD2	P54710	66 aa		10.93	□□□□□ -0.66
MBD1-223	ENST00000590215	VAMP3	Q15836	100 aa		10.93	□□□□□ -0.66
MBD1-223	ENST00000590215	RAB37	Q96AX2	223 aa		10.92	□□□□□ -0.66
MBD1-223	ENST00000590215	LOC105371267	A0A1B0GV96	52 aa		10.9	□□□□□ -0.66
MBD1-223	ENST00000590215	CTAG1A	P78358	180 aa		10.9	□□□□□ -0.66
MBD1-223	ENST00000590215	LINC00304	Q8N9R0	145 aa		10.9	□□□□□ -0.66
MBD1-223	ENST00000590215	NHP2	Q9NX24	153 aa	Known RBP	10.9	□□□□□ -0.66
MBD1-223	ENST00000590215	LINC00575	Q6W349	94 aa		10.89	□□□□□ -0.67
MBD1-223	ENST00000590215	BVES-AS1	Q5T3Y7	98 aa		10.88	□□□□□ -0.67
MBD1-223	ENST00000590215	IGLV5-48	A0A075B6I7	105 aa		10.87	□□□□□ -0.67
MBD1-223	ENST00000590215	SSBP3-AS1	Q7Z2R9	100 aa		10.87	□□□□□ -0.67
MBD1-223	ENST00000590215	PRO1854	Q9UHT4	67 aa		10.87	□□□□□ -0.67
MBD1-223	ENST00000590215	LINC01547	P58512	204 aa	Predicted RBP	10.86	□□□□□ -0.67
MBD1-223	ENST00000590215	TEX49	A0A1B0GTD5	131 aa		10.85	□□□□□ -0.67
MBD1-223	ENST00000590215		H7C2G1	150 aa		10.85	□□□□□ -0.67
MBD1-223	ENST00000590215	SLC25A20	O43772	301 aa		10.85	□□□□□ -0.67
MBD1-223	ENST00000590215	SPAG11A	Q6PDA7	123 aa		10.85	□□□□□ -0.67
MBD1-223	ENST00000590215	PRO1933	Q9H354	126 aa		10.85	□□□□□ -0.67
MBD1-223	ENST00000590215	IGLV9-49	A0A0B4J1Y8	123 aa		10.84	□□□□□ -0.67
MBD1-223	ENST00000590215	TSPAN13	O95857	204 aa		10.84	□□□□□ -0.67
MBD1-223	ENST00000590215	MOBP	Q13875	183 aa		10.84	□□□□□ -0.67
MBD1-223	ENST00000590215		Q8NBF4	154 aa		10.84	□□□□□ -0.67
MBD1-223	ENST00000590215	hADV29S1	A0JD25	119 aa		10.83	□□□□□ -0.68
MBD1-223	ENST00000590215	LAMTOR3	Q9UHA4	124 aa		10.82	□□□□□ -0.68
MBD1-223	ENST00000590215	SMIM29	Q86T20	159 aa		10.81	□□□□□ -0.68
MBD1-223	ENST00000590215	DEFB105A	Q8NG35	78 aa		10.81	□□□□□ -0.68
MBD1-223	ENST00000590215		H0YGX0	51 aa		10.8	□□□□□ -0.68
MBD1-223	ENST00000590215		Q1RN00	199 aa		10.79	□□□□□ -0.68
MBD1-223	ENST00000590215		Q8N377	158 aa		10.79	□□□□□ -0.68
MBD1-223	ENST00000590215	C4orf48	Q5BLP8	95 aa		10.78	□□□□□ -0.68
MBD1-223	ENST00000590215	C9orf153	Q5TBE3	101 aa		10.78	□□□□□ -0.68
MBD1-223	ENST00000590215		Q6ZQY7	126 aa		10.78	□□□□□ -0.68
MBD1-223	ENST00000590215		K7ERJ3	54 aa		10.77	□□□□□ -0.69
MBD1-223	ENST00000590215	SPINK1	P00995	79 aa		10.77	□□□□□ -0.69
MBD1-223	ENST00000590215	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	10.77	□□□□□ -0.69
MBD1-223	ENST00000590215	TRIAP1	O43715	76 aa		10.75	□□□□□ -0.69
MBD1-223	ENST00000590215	LRP2	P98164	4655 aa		10.74	□□□□□ -0.69
MBD1-223	ENST00000590215	RPS29	P62273	56 aa	Known RBP	10.74	□□□□□ -0.69
MBD1-223	ENST00000590215	FAM218A	Q96MZ4	157 aa		10.74	□□□□□ -0.69
MBD1-223	ENST00000590215		A0A1B0GX51	115 aa		10.73	□□□□□ -0.69

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