RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 SPATA45Q537H7 98 aa9.8□□□□□ -0.84
RNF43-206ENST00000582293 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
RNF43-206ENST00000582293 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
RNF43-206ENST00000582293 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
RNF43-206ENST00000582293 VAMP8Q9BV40 100 aa9.79□□□□□ -0.84
RNF43-206ENST00000582293 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
RNF43-206ENST00000582293 B5MCH6 92 aa9.78□□□□□ -0.84
RNF43-206ENST00000582293 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
RNF43-206ENST00000582293 HIGD2AQ9BW72 106 aa9.76□□□□□ -0.85
RNF43-206ENST00000582293 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
RNF43-206ENST00000582293 A0A087X002 238 aa9.75□□□□□ -0.85
RNF43-206ENST00000582293 ETDCA0A1B0GVM5 59 aa9.75□□□□□ -0.85
RNF43-206ENST00000582293 C2orf91Q6ZV80 131 aa9.75□□□□□ -0.85
RNF43-206ENST00000582293 LINC00518Q8N0U6 118 aa9.75□□□□□ -0.85
RNF43-206ENST00000582293 OR13C6PQ8NH95 151 aa9.75□□□□□ -0.85
RNF43-206ENST00000582293 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
RNF43-206ENST00000582293 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
RNF43-206ENST00000582293 Q9BRP9 147 aa9.74□□□□□ -0.85
RNF43-206ENST00000582293 Q6ZRX8 168 aa9.73□□□□□ -0.85
RNF43-206ENST00000582293 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
RNF43-206ENST00000582293 S100A12P80511 92 aa9.72□□□□□ -0.85
RNF43-206ENST00000582293 HMCN2Q8NDA2 5059 aa9.72□□□□□ -0.85
RNF43-206ENST00000582293 A4D1N5 150 aa9.71□□□□□ -0.86
RNF43-206ENST00000582293 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
RNF43-206ENST00000582293 HIGD1BQ9P298 99 aa9.71□□□□□ -0.86
RNF43-206ENST00000582293 KRTAP13-2Q52LG2 175 aa9.7□□□□□ -0.86
RNF43-206ENST00000582293 SPRR4Q96PI1 79 aa9.7□□□□□ -0.86
RNF43-206ENST00000582293 HIST1H4GQ99525 98 aa9.69□□□□□ -0.86
RNF43-206ENST00000582293 A6NDN8 102 aa9.68□□□□□ -0.86
RNF43-206ENST00000582293 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
RNF43-206ENST00000582293 FAM229BQ4G0N7 80 aa9.67□□□□□ -0.86
RNF43-206ENST00000582293 CBY1Q9Y3M2 126 aa9.67□□□□□ -0.86
RNF43-206ENST00000582293 TRAV13-2A0A0B4J235 113 aa9.66□□□□□ -0.86
RNF43-206ENST00000582293 CRYGAP11844 174 aa9.66□□□□□ -0.86
RNF43-206ENST00000582293 RPL13AP40429 203 aaKnown RBP9.65□□□□□ -0.86
RNF43-206ENST00000582293 ELOF1P60002 83 aaKnown RBP9.65□□□□□ -0.86
RNF43-206ENST00000582293 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
RNF43-206ENST00000582293 C12orf57Q99622 126 aa9.65□□□□□ -0.86
RNF43-206ENST00000582293 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
RNF43-206ENST00000582293 COX7BP24311 80 aa9.62□□□□□ -0.87
RNF43-206ENST00000582293 C3orf22Q8N5N4 141 aa9.62□□□□□ -0.87
RNF43-206ENST00000582293 ST20-AS1Q8NBB2 130 aa9.62□□□□□ -0.87
RNF43-206ENST00000582293 ZNF706Q9Y5V0 76 aaPredicted RBP9.62□□□□□ -0.87
RNF43-206ENST00000582293 TRBV7-6A0A0J9YX20 115 aa9.61□□□□□ -0.87
RNF43-206ENST00000582293 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
RNF43-206ENST00000582293 CFC1P0CG37 223 aa9.61□□□□□ -0.87
RNF43-206ENST00000582293 HINT1P49773 126 aaPredicted RBP9.61□□□□□ -0.87
RNF43-206ENST00000582293 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
RNF43-206ENST00000582293 TAL2Q16559 108 aa9.6□□□□□ -0.87
RNF43-206ENST00000582293 CEND1Q8N111 149 aa9.6□□□□□ -0.87
RNF43-206ENST00000582293 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
RNF43-206ENST00000582293 GAGE2AQ6NT46 116 aa9.59□□□□□ -0.87
RNF43-206ENST00000582293 FXYD2P54710 66 aa9.58□□□□□ -0.88
RNF43-206ENST00000582293 DHRS4-AS1Q9P1J3 65 aa9.58□□□□□ -0.88
RNF43-206ENST00000582293 A0A1B0GWB2 263 aa9.57□□□□□ -0.88
RNF43-206ENST00000582293 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
RNF43-206ENST00000582293 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
RNF43-206ENST00000582293 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
RNF43-206ENST00000582293 SPRR1BP22528 89 aa9.54□□□□□ -0.88
RNF43-206ENST00000582293 HSD52Q0P140 79 aa9.54□□□□□ -0.88
RNF43-206ENST00000582293 PRO1933Q9H354 126 aa9.53□□□□□ -0.88
RNF43-206ENST00000582293 LINC01547P58512 204 aaPredicted RBP9.52□□□□□ -0.89
RNF43-206ENST00000582293 RAB37Q96AX2 223 aa9.51□□□□□ -0.89
RNF43-206ENST00000582293 H7C2G1 150 aa9.5□□□□□ -0.89
RNF43-206ENST00000582293 LINC00575Q6W349 94 aa9.5□□□□□ -0.89
RNF43-206ENST00000582293 LINC00304Q8N9R0 145 aa9.5□□□□□ -0.89
RNF43-206ENST00000582293 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
RNF43-206ENST00000582293 TSPAN13O95857 204 aa9.49□□□□□ -0.89
RNF43-206ENST00000582293 IGLV5-48A0A075B6I7 105 aa9.48□□□□□ -0.89
RNF43-206ENST00000582293 TMEM238LA0A1B0GVL6 79 aa9.48□□□□□ -0.89
RNF43-206ENST00000582293 A6NJY4 79 aa9.48□□□□□ -0.89
RNF43-206ENST00000582293 MOBPQ13875 183 aa9.48□□□□□ -0.89
RNF43-206ENST00000582293 Q8NBF4 154 aa9.48□□□□□ -0.89
RNF43-206ENST00000582293 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
RNF43-206ENST00000582293 K7ERJ3 54 aa9.47□□□□□ -0.89
RNF43-206ENST00000582293 VAMP3Q15836 100 aa9.47□□□□□ -0.89
RNF43-206ENST00000582293 SMIM29Q86T20 159 aa9.47□□□□□ -0.89
RNF43-206ENST00000582293 DEFB105AQ8NG35 78 aa9.46□□□□□ -0.9
RNF43-206ENST00000582293 NHP2Q9NX24 153 aaKnown RBP9.46□□□□□ -0.9
RNF43-206ENST00000582293 BVES-AS1Q5T3Y7 98 aa9.45□□□□□ -0.9
RNF43-206ENST00000582293 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
RNF43-206ENST00000582293 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
RNF43-206ENST00000582293 Q8N377 158 aa9.44□□□□□ -0.9
RNF43-206ENST00000582293 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
RNF43-206ENST00000582293 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
RNF43-206ENST00000582293 LPAP08519 4548 aa9.43□□□□□ -0.9
RNF43-206ENST00000582293 LRP2P98164 4655 aa9.43□□□□□ -0.9
RNF43-206ENST00000582293 Q1RN00 199 aa9.42□□□□□ -0.9
RNF43-206ENST00000582293 Q6ZQY7 126 aa9.42□□□□□ -0.9
RNF43-206ENST00000582293 TRIAP1O43715 76 aa9.41□□□□□ -0.9
RNF43-206ENST00000582293 SLC25A20O43772 301 aa9.41□□□□□ -0.9
RNF43-206ENST00000582293 C9orf153Q5TBE3 101 aa9.41□□□□□ -0.9
RNF43-206ENST00000582293 CTAG1AP78358 180 aa9.4□□□□□ -0.9
RNF43-206ENST00000582293 SPAG11AQ6PDA7 123 aa9.4□□□□□ -0.9
RNF43-206ENST00000582293 LAMTOR3Q9UHA4 124 aa9.4□□□□□ -0.9
RNF43-206ENST00000582293 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
RNF43-206ENST00000582293 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
RNF43-206ENST00000582293 H0YGX0 51 aa9.37□□□□□ -0.91
RNF43-206ENST00000582293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
RNF43-206ENST00000582293 SPINK1P00995 79 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms