RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CIRBP-AS1Q8TBR5 109 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 TOMM7Q9P0U1 55 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 C6orf48Q9UBA6 75 aa6.31□□□□□ -1.4
GGA3-209ENST00000580646 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
GGA3-209ENST00000580646 TCL1BO95988 128 aa6.3□□□□□ -1.4
GGA3-209ENST00000580646 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
GGA3-209ENST00000580646 UNQ6190/PRO20217Q6UXQ8 127 aa6.3□□□□□ -1.4
GGA3-209ENST00000580646 SPACA4Q8TDM5 124 aa6.3□□□□□ -1.4
GGA3-209ENST00000580646 TRBV10-2A0A0K0K1G8 114 aa6.29□□□□□ -1.4
GGA3-209ENST00000580646 SEC61GP60059 68 aa6.29□□□□□ -1.4
GGA3-209ENST00000580646 C2orf82Q6UX34 121 aa6.29□□□□□ -1.4
GGA3-209ENST00000580646 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
GGA3-209ENST00000580646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
GGA3-209ENST00000580646 A0A096LNI7 61 aa6.28□□□□□ -1.4
GGA3-209ENST00000580646 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
GGA3-209ENST00000580646 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
GGA3-209ENST00000580646 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
GGA3-209ENST00000580646 HERVK_113P61574 105 aa6.28□□□□□ -1.4
GGA3-209ENST00000580646 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
GGA3-209ENST00000580646 PANO1I0J062 215 aa6.27□□□□□ -1.41
GGA3-209ENST00000580646 SCGB1D4Q6XE38 83 aa6.27□□□□□ -1.41
GGA3-209ENST00000580646 LINC00643Q86TS7 51 aa6.27□□□□□ -1.41
GGA3-209ENST00000580646 V9GYY9 64 aa6.27□□□□□ -1.41
GGA3-209ENST00000580646 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
GGA3-209ENST00000580646 COX17Q14061 63 aa6.26□□□□□ -1.41
GGA3-209ENST00000580646 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
GGA3-209ENST00000580646 PLAC8Q9NZF1 115 aa6.26□□□□□ -1.41
GGA3-209ENST00000580646 A0A087WYN8 130 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 LEPROTO15243 131 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
GGA3-209ENST00000580646 RPL18AQ02543 176 aaKnown RBP6.25□□□□□ -1.41
GGA3-209ENST00000580646 Q6ZRP5 223 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 PLEKHB2Q96CS7 222 aa6.25□□□□□ -1.41
GGA3-209ENST00000580646 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
GGA3-209ENST00000580646 C9orf116Q5BN46 136 aaPredicted RBP6.24□□□□□ -1.41
GGA3-209ENST00000580646 DPH3Q96FX2 82 aa6.24□□□□□ -1.41
GGA3-209ENST00000580646 J3QL48 77 aa6.23□□□□□ -1.41
GGA3-209ENST00000580646 COX6CP09669 75 aa6.23□□□□□ -1.41
GGA3-209ENST00000580646 TTTY13Q9BZ97 58 aa6.23□□□□□ -1.41
GGA3-209ENST00000580646 J3QQQ9 107 aa6.22□□□□□ -1.41
GGA3-209ENST00000580646 CFC1BP0CG36 223 aa6.22□□□□□ -1.41
GGA3-209ENST00000580646 CFC1P0CG37 223 aa6.22□□□□□ -1.41
GGA3-209ENST00000580646 RPL37AP61513 92 aaKnown RBP6.22□□□□□ -1.41
GGA3-209ENST00000580646 NDUFA12Q9UI09 145 aa6.22□□□□□ -1.41
GGA3-209ENST00000580646 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
GGA3-209ENST00000580646 NDUFC2O95298 119 aa6.21□□□□□ -1.42
GGA3-209ENST00000580646 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
GGA3-209ENST00000580646 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
GGA3-209ENST00000580646 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
GGA3-209ENST00000580646 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
GGA3-209ENST00000580646 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
GGA3-209ENST00000580646 Q5XG85 94 aa6.2□□□□□ -1.42
GGA3-209ENST00000580646 HRCT1Q6UXD1 115 aa6.2□□□□□ -1.42
GGA3-209ENST00000580646 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
GGA3-209ENST00000580646 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
GGA3-209ENST00000580646 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
GGA3-209ENST00000580646 Q1RN00 199 aa6.19□□□□□ -1.42
GGA3-209ENST00000580646 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
GGA3-209ENST00000580646 C7orf33Q8WU49 177 aa6.19□□□□□ -1.42
GGA3-209ENST00000580646 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
GGA3-209ENST00000580646 PFN2P35080 140 aa6.18□□□□□ -1.42
GGA3-209ENST00000580646 NPC2P61916 151 aa6.18□□□□□ -1.42
GGA3-209ENST00000580646 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
GGA3-209ENST00000580646 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
GGA3-209ENST00000580646 IGLV5-37A0A075B6J1 123 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 OXTP01178 125 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 LINC00158P58513 81 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 C4orf26Q17RF5 130 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 DAND5Q8N907 189 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 SND1-IT1Q9HBX3 110 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 XAGE1AQ9HD64 81 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
GGA3-209ENST00000580646 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
GGA3-209ENST00000580646 C1orf195Q5TG92 126 aa6.16□□□□□ -1.42
GGA3-209ENST00000580646 A0A0J9YXY3 114 aa6.15□□□□□ -1.42
GGA3-209ENST00000580646 hADV29S1A0JD25 119 aa6.15□□□□□ -1.42
GGA3-209ENST00000580646 TIMM17BO60830 172 aa6.15□□□□□ -1.42
GGA3-209ENST00000580646 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
GGA3-209ENST00000580646 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
GGA3-209ENST00000580646 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
GGA3-209ENST00000580646 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
GGA3-209ENST00000580646 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
GGA3-209ENST00000580646 VPREB1P12018 145 aa6.13□□□□□ -1.43
GGA3-209ENST00000580646 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
GGA3-209ENST00000580646 MRPL55Q7Z7F7 128 aaKnown RBP6.13□□□□□ -1.43
GGA3-209ENST00000580646 LAMTOR3Q9UHA4 124 aa6.13□□□□□ -1.43
GGA3-209ENST00000580646 LST1O00453 97 aa6.12□□□□□ -1.43
GGA3-209ENST00000580646 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
GGA3-209ENST00000580646 NKAPP1Q8N9T2 125 aa6.12□□□□□ -1.43
GGA3-209ENST00000580646 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
GGA3-209ENST00000580646 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
GGA3-209ENST00000580646 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
GGA3-209ENST00000580646 Q6JHZ5 121 aa6.11□□□□□ -1.43
GGA3-209ENST00000580646 LITAFQ99732 161 aa6.11□□□□□ -1.43
GGA3-209ENST00000580646 TRIAP1O43715 76 aa6.1□□□□□ -1.43
GGA3-209ENST00000580646 BCE1O60756 84 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms