RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 IFI27P40305 119 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 UBE2BP63146 152 aa6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 ZNF861PO60384 105 aa6.73□□□□□ -1.33
SMARCE1-214ENST00000578112 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-214ENST00000578112 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
SMARCE1-214ENST00000578112 UNQ6190/PRO20217Q6UXQ8 127 aa6.73□□□□□ -1.33
SMARCE1-214ENST00000578112 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
SMARCE1-214ENST00000578112 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
SMARCE1-214ENST00000578112 DSCR8Q96T75 97 aa6.72□□□□□ -1.33
SMARCE1-214ENST00000578112 SMIM26A0A096LP01 95 aa6.72□□□□□ -1.33
SMARCE1-214ENST00000578112 K7EMI3 77 aa6.72□□□□□ -1.33
SMARCE1-214ENST00000578112 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-214ENST00000578112 C10orf25Q5T742 122 aa6.72□□□□□ -1.33
SMARCE1-214ENST00000578112 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
SMARCE1-214ENST00000578112 A0A1B0GXF2 115 aa6.71□□□□□ -1.34
SMARCE1-214ENST00000578112 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
SMARCE1-214ENST00000578112 TMEM141Q96I45 108 aa6.71□□□□□ -1.34
SMARCE1-214ENST00000578112 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 PRR4Q16378 134 aa6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 LINC00242Q5T6M2 205 aa6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
SMARCE1-214ENST00000578112 TCL1BO95988 128 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 IGKCP01834 107 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 CXCL5P42830 114 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 Q8IZM0 81 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 ORMDL3Q8N138 153 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 D6R8Y8 96 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 H3BT86 120 aa6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 C9orf129Q5T035 196 aaKnown RBP6.69□□□□□ -1.34
SMARCE1-214ENST00000578112 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
SMARCE1-214ENST00000578112 PRSS2P07478 247 aa6.68□□□□□ -1.34
SMARCE1-214ENST00000578112 PAPPA-AS1Q5QFB9 102 aa6.68□□□□□ -1.34
SMARCE1-214ENST00000578112 FAM19A2Q8N3H0 131 aa6.68□□□□□ -1.34
SMARCE1-214ENST00000578112 TRBV7-6A0A0J9YX20 115 aa6.67□□□□□ -1.34
SMARCE1-214ENST00000578112 NPYP01303 97 aa6.67□□□□□ -1.34
SMARCE1-214ENST00000578112 SCGB1C2P0DMR2 95 aa6.67□□□□□ -1.34
SMARCE1-214ENST00000578112 AMELXQ99217 191 aa6.67□□□□□ -1.34
SMARCE1-214ENST00000578112 NPC2P61916 151 aa6.67□□□□□ -1.34
SMARCE1-214ENST00000578112 hADV29S1A0JD25 119 aa6.66□□□□□ -1.34
SMARCE1-214ENST00000578112 BCE1O60756 84 aa6.66□□□□□ -1.34
SMARCE1-214ENST00000578112 FAM229BQ4G0N7 80 aa6.66□□□□□ -1.34
SMARCE1-214ENST00000578112 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
SMARCE1-214ENST00000578112 ORMDL2Q53FV1 153 aa6.66□□□□□ -1.34
SMARCE1-214ENST00000578112 C22orf24Q9Y442 160 aa6.66□□□□□ -1.34
SMARCE1-214ENST00000578112 LINC01549A6NIU2 74 aa6.65□□□□□ -1.34
SMARCE1-214ENST00000578112 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
SMARCE1-214ENST00000578112 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.35
SMARCE1-214ENST00000578112 Q8N8P6 123 aa6.65□□□□□ -1.35
SMARCE1-214ENST00000578112 ATOX1O00244 68 aa6.64□□□□□ -1.35
SMARCE1-214ENST00000578112 F8VRH5 84 aa6.64□□□□□ -1.35
SMARCE1-214ENST00000578112 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
SMARCE1-214ENST00000578112 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
SMARCE1-214ENST00000578112 LINC01545Q5VT33 79 aa6.63□□□□□ -1.35
SMARCE1-214ENST00000578112 C2orf82Q6UX34 121 aa6.62□□□□□ -1.35
SMARCE1-214ENST00000578112 TYMSOSQ8TAI1 123 aa6.62□□□□□ -1.35
SMARCE1-214ENST00000578112 FXYD2P54710 66 aa6.62□□□□□ -1.35
SMARCE1-214ENST00000578112 LINC00173Q6ZV60 143 aa6.62□□□□□ -1.35
SMARCE1-214ENST00000578112 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
SMARCE1-214ENST00000578112 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
SMARCE1-214ENST00000578112 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
SMARCE1-214ENST00000578112 NXT2Q9NPJ8 142 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-214ENST00000578112 IGIPA6NJ69 53 aa6.6□□□□□ -1.35
SMARCE1-214ENST00000578112 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
SMARCE1-214ENST00000578112 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-214ENST00000578112 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-214ENST00000578112 CHCHD1Q96BP2 118 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-214ENST00000578112 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
SMARCE1-214ENST00000578112 KTN1-AS1Q86SY8 53 aa6.59□□□□□ -1.35
SMARCE1-214ENST00000578112 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
SMARCE1-214ENST00000578112 LPAP08519 4548 aa6.59□□□□□ -1.36
SMARCE1-214ENST00000578112 K7ERJ3 54 aa6.58□□□□□ -1.36
SMARCE1-214ENST00000578112 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
SMARCE1-214ENST00000578112 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
SMARCE1-214ENST00000578112 A0A087X002 238 aa6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 SCGB1D4Q6XE38 83 aa6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 TOMM6Q96B49 74 aa6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 LINC00167Q96N53 147 aa6.57□□□□□ -1.36
SMARCE1-214ENST00000578112 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
SMARCE1-214ENST00000578112 HERVK_113P61574 105 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 CYSTM1Q9H1C7 97 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 XAGE1AQ9HD64 81 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 UBE2AP49459 152 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 MUC17Q685J3 4493 aa6.55□□□□□ -1.36
SMARCE1-214ENST00000578112 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
SMARCE1-214ENST00000578112 ACYP1P07311 99 aa6.54□□□□□ -1.36
SMARCE1-214ENST00000578112 NKAPP1Q8N9T2 125 aa6.54□□□□□ -1.36
SMARCE1-214ENST00000578112 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
SMARCE1-214ENST00000578112 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
SMARCE1-214ENST00000578112 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms