RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
SMG6-215ENST00000574501 DEFB113Q30KQ7 82 aa9.52□□□□□ -0.89
SMG6-215ENST00000574501 FLNAP21333 2647 aaKnown RBP9.51□□□□□ -0.89
SMG6-215ENST00000574501 M0R378 163 aa9.51□□□□□ -0.89
SMG6-215ENST00000574501 DEFB135Q30KP9 77 aa9.51□□□□□ -0.89
SMG6-215ENST00000574501 Q6ZRP5 223 aa9.5□□□□□ -0.89
SMG6-215ENST00000574501 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
SMG6-215ENST00000574501 CAMK2N2Q96S95 79 aa9.5□□□□□ -0.89
SMG6-215ENST00000574501 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
SMG6-215ENST00000574501 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
SMG6-215ENST00000574501 ACANP16112 2415 aa9.49□□□□□ -0.89
SMG6-215ENST00000574501 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
SMG6-215ENST00000574501 PSPHP1O15172 72 aa9.48□□□□□ -0.89
SMG6-215ENST00000574501 LELP1Q5T871 98 aa9.48□□□□□ -0.89
SMG6-215ENST00000574501 PRR4Q16378 134 aa9.47□□□□□ -0.89
SMG6-215ENST00000574501 Q6ZRU5 148 aa9.47□□□□□ -0.89
SMG6-215ENST00000574501 Q8N377 158 aa9.47□□□□□ -0.89
SMG6-215ENST00000574501 PRB2P02812 416 aaPredicted RBP9.46□□□□□ -0.89
SMG6-215ENST00000574501 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.89
SMG6-215ENST00000574501 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
SMG6-215ENST00000574501 Q1T7F1 81 aa9.44□□□□□ -0.9
SMG6-215ENST00000574501 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
SMG6-215ENST00000574501 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
SMG6-215ENST00000574501 KRTAP1-3Q8IUG1 177 aa9.43□□□□□ -0.9
SMG6-215ENST00000574501 LCE6AA0A183 80 aa9.42□□□□□ -0.9
SMG6-215ENST00000574501 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
SMG6-215ENST00000574501 OTOGQ6ZRI0 2925 aa9.42□□□□□ -0.9
SMG6-215ENST00000574501 IGLV5-48A0A075B6I7 105 aa9.41□□□□□ -0.9
SMG6-215ENST00000574501 PMAIP1Q13794 54 aa9.41□□□□□ -0.9
SMG6-215ENST00000574501 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
SMG6-215ENST00000574501 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
SMG6-215ENST00000574501 ZCCHC13Q8WW36 166 aaKnown RBP9.4□□□□□ -0.9
SMG6-215ENST00000574501 K7EQZ3 153 aa9.4□□□□□ -0.91
SMG6-215ENST00000574501 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.91
SMG6-215ENST00000574501 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
SMG6-215ENST00000574501 DSCR10P59022 87 aa9.39□□□□□ -0.91
SMG6-215ENST00000574501 C1orf137Q5JT78 98 aa9.39□□□□□ -0.91
SMG6-215ENST00000574501 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
SMG6-215ENST00000574501 C15orf56Q8N910 161 aa9.38□□□□□ -0.91
SMG6-215ENST00000574501 PKD1L1Q8TDX9 2849 aa9.37□□□□□ -0.91
SMG6-215ENST00000574501 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
SMG6-215ENST00000574501 HIVEP1P15822 2718 aa9.37□□□□□ -0.91
SMG6-215ENST00000574501 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
SMG6-215ENST00000574501 RPL37AP8A6NKH3 93 aa9.36□□□□□ -0.91
SMG6-215ENST00000574501 Q8NAQ8 132 aa9.36□□□□□ -0.91
SMG6-215ENST00000574501 KCNQ1DNQ9H478 68 aa9.36□□□□□ -0.91
SMG6-215ENST00000574501 A8MU10 97 aa9.35□□□□□ -0.91
SMG6-215ENST00000574501 KRTAP10-3P60369 221 aa9.35□□□□□ -0.91
SMG6-215ENST00000574501 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
SMG6-215ENST00000574501 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
SMG6-215ENST00000574501 A8MUN3 132 aa9.34□□□□□ -0.91
SMG6-215ENST00000574501 SPART-AS1P0CW21 52 aa9.34□□□□□ -0.91
SMG6-215ENST00000574501 Q8NBF4 154 aa9.34□□□□□ -0.91
SMG6-215ENST00000574501 Q9BRP9 147 aa9.34□□□□□ -0.91
SMG6-215ENST00000574501 PSCAO43653 123 aa9.33□□□□□ -0.92
SMG6-215ENST00000574501 DEFB116Q30KQ4 102 aa9.33□□□□□ -0.92
SMG6-215ENST00000574501 MAST4O15021 2626 aa9.32□□□□□ -0.92
SMG6-215ENST00000574501 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
SMG6-215ENST00000574501 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
SMG6-215ENST00000574501 TNP2Q05952 138 aa9.31□□□□□ -0.92
SMG6-215ENST00000574501 CYP4F30PQ9H0H9 118 aa9.31□□□□□ -0.92
SMG6-215ENST00000574501 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
SMG6-215ENST00000574501 APOC4P55056 127 aa9.3□□□□□ -0.92
SMG6-215ENST00000574501 Q6ZRX8 168 aa9.3□□□□□ -0.92
SMG6-215ENST00000574501 TRRAPQ9Y4A5 3859 aa9.3□□□□□ -0.92
SMG6-215ENST00000574501 F8P00451 2351 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 A0A1B0GW54 56 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 SPRR4Q96PI1 79 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 DHRS4-AS1Q9P1J3 65 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 WFDC13Q8IUB5 93 aa9.29□□□□□ -0.92
SMG6-215ENST00000574501 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.92
SMG6-215ENST00000574501 SMR3AQ99954 134 aa9.26□□□□□ -0.93
SMG6-215ENST00000574501 TEP1Q99973 2627 aaKnown RBP9.26□□□□□ -0.93
SMG6-215ENST00000574501 TENM1Q9UKZ4 2725 aa9.26□□□□□ -0.93
SMG6-215ENST00000574501 KRTAP4-16G5E9R7 235 aaPredicted RBP9.25□□□□□ -0.93
SMG6-215ENST00000574501 Q5VV11 94 aa9.25□□□□□ -0.93
SMG6-215ENST00000574501 KRTAP1-1Q07627 177 aa9.25□□□□□ -0.93
SMG6-215ENST00000574501 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
SMG6-215ENST00000574501 NSD1Q96L73 2696 aaPredicted RBP9.24□□□□□ -0.93
SMG6-215ENST00000574501 NDUFB1O75438 58 aa9.23□□□□□ -0.93
SMG6-215ENST00000574501 B9D2Q9BPU9 175 aa9.23□□□□□ -0.93
SMG6-215ENST00000574501 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
SMG6-215ENST00000574501 UBE2BP63146 152 aa9.22□□□□□ -0.93
SMG6-215ENST00000574501 MP68P56378 58 aa9.22□□□□□ -0.93
SMG6-215ENST00000574501 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.93
SMG6-215ENST00000574501 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.93
SMG6-215ENST00000574501 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
SMG6-215ENST00000574501 SPRR1AP35321 89 aa9.19□□□□□ -0.94
SMG6-215ENST00000574501 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
SMG6-215ENST00000574501 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
SMG6-215ENST00000574501 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
SMG6-215ENST00000574501 PRR15LQ9BU68 103 aa9.16□□□□□ -0.94
SMG6-215ENST00000574501 A0A087WSZ3 146 aa9.16□□□□□ -0.94
SMG6-215ENST00000574501 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
SMG6-215ENST00000574501 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
SMG6-215ENST00000574501 RETNQ9HD89 108 aa9.16□□□□□ -0.94
SMG6-215ENST00000574501 H0Y9P7 68 aa9.15□□□□□ -0.94
SMG6-215ENST00000574501 CD164Q04900 197 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms