RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MYMXA0A1B0GTQ4 84 aa6.3□□□□□ -1.4
GTF3C1-209ENST00000568569 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
GTF3C1-209ENST00000568569 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
GTF3C1-209ENST00000568569 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
GTF3C1-209ENST00000568569 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
GTF3C1-209ENST00000568569 TRAV23DV6A0A075B6W5 121 aa6.29□□□□□ -1.4
GTF3C1-209ENST00000568569 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
GTF3C1-209ENST00000568569 S100A7L2Q5SY68 101 aa6.29□□□□□ -1.4
GTF3C1-209ENST00000568569 LINC00310P59036 64 aa6.28□□□□□ -1.4
GTF3C1-209ENST00000568569 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
GTF3C1-209ENST00000568569 SLC25A34Q6PIV7 304 aa6.28□□□□□ -1.4
GTF3C1-209ENST00000568569 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
GTF3C1-209ENST00000568569 ZNF73O43830 326 aaPredicted RBP6.27□□□□□ -1.41
GTF3C1-209ENST00000568569 NDUFC2O95298 119 aa6.26□□□□□ -1.41
GTF3C1-209ENST00000568569 SPRR1BP22528 89 aa6.26□□□□□ -1.41
GTF3C1-209ENST00000568569 TRGC2P03986 189 aa6.25□□□□□ -1.41
GTF3C1-209ENST00000568569 HINT1P49773 126 aaPredicted RBP6.25□□□□□ -1.41
GTF3C1-209ENST00000568569 IFI27L1Q96BM0 104 aa6.25□□□□□ -1.41
GTF3C1-209ENST00000568569 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
GTF3C1-209ENST00000568569 COLCA2A8K830 154 aa6.24□□□□□ -1.41
GTF3C1-209ENST00000568569 CD164Q04900 197 aa6.24□□□□□ -1.41
GTF3C1-209ENST00000568569 TSPEAR-AS2P59090 65 aa6.23□□□□□ -1.41
GTF3C1-209ENST00000568569 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
GTF3C1-209ENST00000568569 SERF1AO75920 110 aa6.22□□□□□ -1.41
GTF3C1-209ENST00000568569 Q5XG85 94 aa6.22□□□□□ -1.41
GTF3C1-209ENST00000568569 H7C2G1 150 aa6.21□□□□□ -1.42
GTF3C1-209ENST00000568569 LEPROTO15243 131 aa6.21□□□□□ -1.42
GTF3C1-209ENST00000568569 CFC1P0CG37 223 aa6.21□□□□□ -1.42
GTF3C1-209ENST00000568569 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
GTF3C1-209ENST00000568569 PRO1933Q9H354 126 aa6.21□□□□□ -1.42
GTF3C1-209ENST00000568569 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
GTF3C1-209ENST00000568569 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
GTF3C1-209ENST00000568569 C1orf195Q5TG92 126 aa6.2□□□□□ -1.42
GTF3C1-209ENST00000568569 J3QQQ9 107 aa6.19□□□□□ -1.42
GTF3C1-209ENST00000568569 HSBP1O75506 76 aa6.19□□□□□ -1.42
GTF3C1-209ENST00000568569 NMUP48645 174 aa6.19□□□□□ -1.42
GTF3C1-209ENST00000568569 Q1RN00 199 aa6.19□□□□□ -1.42
GTF3C1-209ENST00000568569 USH2AO75445 5202 aa6.19□□□□□ -1.42
GTF3C1-209ENST00000568569 H0Y8G0 127 aa6.18□□□□□ -1.42
GTF3C1-209ENST00000568569 SOSTDC1Q6X4U4 206 aa6.18□□□□□ -1.42
GTF3C1-209ENST00000568569 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
GTF3C1-209ENST00000568569 NPC2P61916 151 aa6.17□□□□□ -1.42
GTF3C1-209ENST00000568569 Q6Q795 121 aa6.17□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 PLNP26678 52 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 AKR1D1P51857 326 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HERVK_113P61574 105 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 TAL2Q16559 108 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 SMIM29Q86T20 159 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
GTF3C1-209ENST00000568569 DEFB105AQ8NG35 78 aa6.15□□□□□ -1.42
GTF3C1-209ENST00000568569 OR13C6PQ8NH95 151 aa6.15□□□□□ -1.42
GTF3C1-209ENST00000568569 PMCHL2Q9BQD1 86 aa6.15□□□□□ -1.42
GTF3C1-209ENST00000568569 TEX49A0A1B0GTD5 131 aa6.14□□□□□ -1.43
GTF3C1-209ENST00000568569 ELOF1P60002 83 aaKnown RBP6.14□□□□□ -1.43
GTF3C1-209ENST00000568569 ADAMTSL4-AS1Q5T5F5 129 aa6.14□□□□□ -1.43
GTF3C1-209ENST00000568569 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
GTF3C1-209ENST00000568569 TMA7Q9Y2S6 64 aaKnown RBP6.14□□□□□ -1.43
GTF3C1-209ENST00000568569 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
GTF3C1-209ENST00000568569 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
GTF3C1-209ENST00000568569 FABP4P15090 132 aa6.13□□□□□ -1.43
GTF3C1-209ENST00000568569 SPANXCQ9NY87 97 aa6.13□□□□□ -1.43
GTF3C1-209ENST00000568569 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
GTF3C1-209ENST00000568569 COX7BP24311 80 aa6.12□□□□□ -1.43
GTF3C1-209ENST00000568569 DPM2O94777 84 aa6.11□□□□□ -1.43
GTF3C1-209ENST00000568569 TCL1BO95988 128 aa6.11□□□□□ -1.43
GTF3C1-209ENST00000568569 C6orf99Q4VX62 202 aa6.11□□□□□ -1.43
GTF3C1-209ENST00000568569 SPANXDQ9BXN6 97 aa6.11□□□□□ -1.43
GTF3C1-209ENST00000568569 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
GTF3C1-209ENST00000568569 ATP11AUNQ6ZP68 121 aa6.1□□□□□ -1.43
GTF3C1-209ENST00000568569 A6NJY4 79 aa6.09□□□□□ -1.43
GTF3C1-209ENST00000568569 IGKCP01834 107 aa6.09□□□□□ -1.43
GTF3C1-209ENST00000568569 LINC00308Q8TCZ7 52 aa6.09□□□□□ -1.43
GTF3C1-209ENST00000568569 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
GTF3C1-209ENST00000568569 IGLV5-48A0A075B6I7 105 aa6.08□□□□□ -1.44
GTF3C1-209ENST00000568569 Q75L30 129 aa6.08□□□□□ -1.44
GTF3C1-209ENST00000568569 C20orf202A1L168 122 aa6.07□□□□□ -1.44
GTF3C1-209ENST00000568569 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
GTF3C1-209ENST00000568569 E9PLD3 99 aa6.06□□□□□ -1.44
GTF3C1-209ENST00000568569 LITAFQ99732 161 aa6.06□□□□□ -1.44
GTF3C1-209ENST00000568569 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
GTF3C1-209ENST00000568569 COA6Q5JTJ3 125 aaKnown RBP6.05□□□□□ -1.44
GTF3C1-209ENST00000568569 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
GTF3C1-209ENST00000568569 LINC00518Q8N0U6 118 aa6.05□□□□□ -1.44
GTF3C1-209ENST00000568569 OBSCN-AS1Q96MR7 158 aa6.05□□□□□ -1.44
GTF3C1-209ENST00000568569 A0A1B0GWB2 263 aa6.04□□□□□ -1.44
GTF3C1-209ENST00000568569 SYS1-DBNDD2H3BUS1 97 aa6.04□□□□□ -1.44
GTF3C1-209ENST00000568569 TIMM17BO60830 172 aa6.04□□□□□ -1.44
GTF3C1-209ENST00000568569 C3orf79P0CE67 100 aa6.03□□□□□ -1.44
GTF3C1-209ENST00000568569 LINC01545Q5VT33 79 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms