RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CARD19Q96LW7 228 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 LRCOL1A6NCL2 159 aa3.68□□□□□ -1.82
SF3B3-210ENST00000567654 NDUFC2-KCTD14E9PQ53 114 aa3.68□□□□□ -1.82
SF3B3-210ENST00000567654 LST1O00453 97 aa3.68□□□□□ -1.82
SF3B3-210ENST00000567654 RPL18AQ02543 176 aaKnown RBP3.68□□□□□ -1.82
SF3B3-210ENST00000567654 OR13C6PQ8NH95 151 aa3.68□□□□□ -1.82
SF3B3-210ENST00000567654 MUC7Q8TAX7 377 aa3.68□□□□□ -1.82
SF3B3-210ENST00000567654 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.67□□□□□ -1.82
SF3B3-210ENST00000567654 A0A087WYN8 130 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 C9JAW5 83 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 F8WDY8 70 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 TLX1NBP0CAT3 122 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 FUSP35637 526 aaKnown RBP eCLIP3.67□□□□□ -1.82
SF3B3-210ENST00000567654 LINC01620Q4KN68 170 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 LYRM7Q5U5X0 104 aa3.67□□□□□ -1.82
SF3B3-210ENST00000567654 RYR2Q92736 4967 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 TRBV20-1A0A075B6N2 111 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 TRBV10-3A0A0K0K1G6 114 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 PSCAO43653 123 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 IGLV6-57P01721 117 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 ATXN8Q156A1 80 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 Q6ZR54 194 aa3.66□□□□□ -1.82
SF3B3-210ENST00000567654 A0A096LNI7 61 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 F8W1H4 67 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 SLC25A20O43772 301 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 CNBPP62633 177 aaKnown RBP3.65□□□□□ -1.83
SF3B3-210ENST00000567654 GAGE2BQ13066 116 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 ETDBQ3ZM63 59 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 TTC32Q5I0X7 151 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
SF3B3-210ENST00000567654 TRBV10-2A0A0K0K1G8 114 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 COX6CP09669 75 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 CHTF8P0CG12 524 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 C6orf99Q4VX62 202 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 S100A7L2Q5SY68 101 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 LINC01600Q96MT4 127 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
SF3B3-210ENST00000567654 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
SF3B3-210ENST00000567654 TRAV23DV6A0A075B6W5 121 aa3.63□□□□□ -1.83
SF3B3-210ENST00000567654 LOC107984640A0A0U1RRK4 108 aa3.63□□□□□ -1.83
SF3B3-210ENST00000567654 PANO1I0J062 215 aa3.63□□□□□ -1.83
SF3B3-210ENST00000567654 M0R378 163 aa3.63□□□□□ -1.83
SF3B3-210ENST00000567654 LY6G6CO95867 125 aa3.63□□□□□ -1.83
SF3B3-210ENST00000567654 FAM19A5Q7Z5A7 132 aaPredicted RBP3.63□□□□□ -1.83
SF3B3-210ENST00000567654 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 A0A087WTM6 91 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 IGKV2-24A0A0C4DH68 120 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 A0A1W2PNN7 141 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 M0QXV9 152 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 TRACP01848 142 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 TEN1Q86WV5 123 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 Q8N814 137 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
SF3B3-210ENST00000567654 KMT2CQ8NEZ4 4911 aaKnown RBP3.61□□□□□ -1.83
SF3B3-210ENST00000567654 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
SF3B3-210ENST00000567654 H0YGX0 51 aa3.61□□□□□ -1.83
SF3B3-210ENST00000567654 H3BT86 120 aa3.61□□□□□ -1.83
SF3B3-210ENST00000567654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
SF3B3-210ENST00000567654 SMIM29Q86T20 159 aa3.61□□□□□ -1.83
SF3B3-210ENST00000567654 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
SF3B3-210ENST00000567654 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
SF3B3-210ENST00000567654 TEX49A0A1B0GTD5 131 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 C16orf90A8MZG2 172 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 KRTAP4-16G5E9R7 235 aaPredicted RBP3.6□□□□□ -1.83
SF3B3-210ENST00000567654 ZNF73O43830 326 aaPredicted RBP3.6□□□□□ -1.83
SF3B3-210ENST00000567654 BAALC-AS2P0C853 105 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 C14orf177Q52M58 125 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 LINC00575Q6W349 94 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 NKAPP1Q8N9T2 125 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 DIRC1Q969H9 104 aa3.6□□□□□ -1.83
SF3B3-210ENST00000567654 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
SF3B3-210ENST00000567654 IGLV1-50A0A075B6I6 118 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 C3orf84H3BNL1 204 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 RTL8CO15255 209 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 COX7BP24311 80 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 ELOF1P60002 83 aaKnown RBP3.59□□□□□ -1.83
SF3B3-210ENST00000567654 C1orf134Q5TEV5 83 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 SDIM1Q6ZPB5 146 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 PHF5AQ7RTV0 110 aaKnown RBP3.59□□□□□ -1.83
SF3B3-210ENST00000567654 MRPL55Q7Z7F7 128 aaKnown RBP3.59□□□□□ -1.83
SF3B3-210ENST00000567654 PPDPFLQ8WWR9 84 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
SF3B3-210ENST00000567654 A0A1B0GV72 72 aa3.58□□□□□ -1.84
SF3B3-210ENST00000567654 DNAL4O96015 105 aa3.58□□□□□ -1.84
SF3B3-210ENST00000567654 SPRR1AP35321 89 aa3.58□□□□□ -1.84
SF3B3-210ENST00000567654 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
SF3B3-210ENST00000567654 RYR3Q15413 4870 aa3.58□□□□□ -1.84
SF3B3-210ENST00000567654 TRBV7-6A0A0J9YX20 115 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 A0A1B0GX51 115 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 hADV29S1A0JD25 119 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 K7ERU9 68 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 Q75L30 129 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 SPACA4Q8TDM5 124 aa3.57□□□□□ -1.84
SF3B3-210ENST00000567654 Q9BRP9 147 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms